Matthew C Radey

Affiliations

Department of Microbiology, University of Washington School of Medicine, Seattle, Washington, USA.

Publications (13)

A population-level strain genotyping method to study pathogen strain dynamics in human infections.

JCI insight

Avec: Sarah J Morgan , Samantha L Durfey , Sumedha Ravishankar , Peter Jorth , Wendy Ni , Duncan T Skerrett , Moira L Aitken , Edward F McKone , Stephen J Salipante , Matthew C Radey , Pradeep K Singh

Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle.

Cell

Avec: Yaxi Wang , Larry A Gallagher , Pia A Andrade , Andi Liu , Ian R Humphreys , Serdar Turkarslan , Kevin J Cutler , Mario L Arrieta-Ortiz , Yaqiao Li , Matthew C Radey , Jeffrey S McLean , Qian Cong , David Baker , Nitin S Baliga , S Brook Peterson , Joseph D Mougous

A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.

Nature

Avec: Beverly Y Mok , Marcos H de Moraes , Jun Zeng , Dustin E Bosch , Anna V Kotrys , Aditya Raguram , FoSheng Hsu , Matthew C Radey , S Brook Peterson , Vamsi K Mootha , Joseph D Mougous , David R Liu

Genome-wide protein-DNA interaction site mapping in bacteria using a double-stranded DNA-specific cytosine deaminase.

Nature microbiology

Avec: Larry A Gallagher , Elena Velazquez , S Brook Peterson , James C Charity , Matthew C Radey , Michael J Gebhardt , FoSheng Hsu , Lauren M Shull , Kevin J Cutler , Keven Macareno , Marcos H de Moraes , Kelsi M Penewit , Jennifer Kim , Pia A Andrade , Thomas LaFramboise , Stephen J Salipante , Michelle L Reniere , Victor de Lorenzo , Paul A Wiggins , Simon L Dove , Joseph D Mougous

Targeted Depletion of Bacteria from Mixed Populations by Programmable Adhesion with Antagonistic Competitor Cells.

Cell host & microbe

Avec: See-Yeun Ting , Esteban Martínez-García , Shuo Huang , Savannah K Bertolli , Katherine A Kelly , Kevin J Cutler , Elizabeth D Su , Hui Zhi , Qing Tang , Matthew C Radey , Manuela Raffatellu , S Brook Peterson , Víctor de Lorenzo , Joseph D Mougous

Human and Extracellular DNA Depletion for Metagenomic Analysis of Complex Clinical Infection Samples Yields Optimized Viable Microbiome Profiles.

Cell reports

Avec: Maria T Nelson , Christopher E Pope , Robyn L Marsh , Daniel J Wolter , Eli J Weiss , Kyle R Hager , Anh T Vo , Mitchell J Brittnacher , Matthew C Radey , Hillary S Hayden , Alexander Eng , Samuel I Miller , Elhanan Borenstein , Lucas R Hoffman

Discovery of coordinately regulated pathways that provide innate protection against interbacterial antagonism.

eLife

Avec: See-Yeun Ting , Kaitlyn D LaCourse , Hannah E Ledvina , Rutan Zhang , Matthew C Radey , Hemantha D Kulasekara , Rahul Somavanshi , Savannah K Bertolli , Larry A Gallagher , Jennifer Kim , Kelsi M Penewit , Stephen J Salipante , Libin Xu , S Brook Peterson , Joseph D Mougous

Human gut bacteria contain acquired interbacterial defence systems.

Nature

Avec: Benjamin D Ross , Adrian J Verster , Matthew C Radey , Danica T Schmidtke , Christopher E Pope , Lucas R Hoffman , Adeline M Hajjar , S Brook Peterson , Elhanan Borenstein , Joseph D Mougous

Combining Ivacaftor and Intensive Antibiotics Achieves Limited Clearance of Cystic Fibrosis Infections.

mBio

Avec: Samantha L Durfey , Sudhakar Pipavath , Anna Li , Anh T Vo , Anina Ratjen , Suzanne Carter , Sarah J Morgan , Matthew C Radey , Brenda Grogan , Stephen J Salipante , Michael J Welsh , David A Stoltz , Christopher H Goss , Edward F McKone , Pradeep K Singh

An interbacterial DNA deaminase toxin directly mutagenizes surviving target populations.

eLife

Avec: Marcos H de Moraes , FoSheng Hsu , Dean Huang , Dustin E Bosch , Jun Zeng , Matthew C Radey , Noah Simon , Hannah E Ledvina , Jacob P Frick , Paul A Wiggins , S Brook Peterson , Joseph D Mougous

Genome Capture Sequencing Selectively Enriches Bacterial DNA and Enables Genome-Wide Measurement of Intrastrain Genetic Diversity in Human Infections.

mBio

Avec: Hillary S Hayden , Snehal Joshi , Matthew C Radey , Anh T Vo , Cara Forsberg , Sarah J Morgan , Adam Waalkes , Elizabeth A Holmes , Sara M Klee , Mary J Emond , Pradeep K Singh , Stephen J Salipante

Genetic manipulation of candidate phyla radiation bacteria provides functional insights into microbial dark matter.

bioRxiv : the preprint server for biology

Avec: Yaxi Wang , Larry A Gallagher , Pia A Andrade , Andi Liu , Ian R Humphreys , Serdar Turkarslan , Kevin J Cutler , Mario L Arrieta-Ortiz , Yaqiao Li , Matthew C Radey , Jeffrey S McLean , Qian Cong , David Baker , Nitin S Baliga , S Brook Peterson , Joseph D Mougous

Discovery of a glutathione utilization pathway in Francisella that shows functional divergence between environmental and pathogenic species.

Cell host & microbe

Avec: Yaxi Wang , Hannah E Ledvina , Catherine A Tower , Stanimir Kambarev , Elizabeth Liu , James C Charity , Lieselotte S M Kreuk , Qing Tang , Qiwen Chen , Larry A Gallagher , Matthew C Radey , Guilhem F Rerolle , Yaqiao Li , Kelsi M Penewit , Serdar Turkarslan , Shawn J Skerrett , Stephen J Salipante , Nitin S Baliga , Joshua J Woodward , Simon L Dove , S Brook Peterson , Jean Celli , Joseph D Mougous

Réseau de co-auteurs

S Brook Peterson 9 collaborations

Joseph D Mougous 9 collaborations

Stephen J Salipante 6 collaborations

Larry A Gallagher 5 collaborations

Kevin J Cutler 4 collaborations

Sarah J Morgan 3 collaborations

Pradeep K Singh 3 collaborations

Yaxi Wang 3 collaborations

Pia A Andrade 3 collaborations

Serdar Turkarslan 3 collaborations

Yaqiao Li 3 collaborations

Nitin S Baliga 3 collaborations

Marcos H de Moraes 3 collaborations

FoSheng Hsu 3 collaborations

Kelsi M Penewit 3 collaborations

Anh T Vo 3 collaborations

Hannah E Ledvina 3 collaborations

Samantha L Durfey 2 collaborations

Edward F McKone 2 collaborations

Andi Liu 2 collaborations

Ian R Humphreys 2 collaborations

Mario L Arrieta-Ortiz 2 collaborations

Jeffrey S McLean 2 collaborations

Qian Cong 2 collaborations

David Baker 2 collaborations

Jun Zeng 2 collaborations

Dustin E Bosch 2 collaborations

James C Charity 2 collaborations

Jennifer Kim 2 collaborations

Paul A Wiggins 2 collaborations

Simon L Dove 2 collaborations

See-Yeun Ting 2 collaborations

Savannah K Bertolli 2 collaborations

Qing Tang 2 collaborations

Christopher E Pope 2 collaborations

Hillary S Hayden 2 collaborations

Elhanan Borenstein 2 collaborations

Lucas R Hoffman 2 collaborations

Sumedha Ravishankar 1 collaboration

Peter Jorth 1 collaboration

Wendy Ni 1 collaboration

Duncan T Skerrett 1 collaboration

Moira L Aitken 1 collaboration

Beverly Y Mok 1 collaboration

Anna V Kotrys 1 collaboration

Aditya Raguram 1 collaboration

Vamsi K Mootha 1 collaboration

David R Liu 1 collaboration

Elena Velazquez 1 collaboration

Michael J Gebhardt 1 collaboration

Lauren M Shull 1 collaboration

Keven Macareno 1 collaboration

Thomas LaFramboise 1 collaboration

Michelle L Reniere 1 collaboration

Victor de Lorenzo 1 collaboration

Esteban Martínez-García 1 collaboration

Shuo Huang 1 collaboration

Katherine A Kelly 1 collaboration

Elizabeth D Su 1 collaboration

Hui Zhi 1 collaboration

Manuela Raffatellu 1 collaboration

Víctor de Lorenzo 1 collaboration

Maria T Nelson 1 collaboration

Robyn L Marsh 1 collaboration

Daniel J Wolter 1 collaboration

Eli J Weiss 1 collaboration

Kyle R Hager 1 collaboration

Mitchell J Brittnacher 1 collaboration

Alexander Eng 1 collaboration

Samuel I Miller 1 collaboration

Kaitlyn D LaCourse 1 collaboration

Rutan Zhang 1 collaboration

Hemantha D Kulasekara 1 collaboration

Rahul Somavanshi 1 collaboration

Libin Xu 1 collaboration

Benjamin D Ross 1 collaboration

Adrian J Verster 1 collaboration

Danica T Schmidtke 1 collaboration

Adeline M Hajjar 1 collaboration

Sudhakar Pipavath 1 collaboration

Anna Li 1 collaboration

Anina Ratjen 1 collaboration

Suzanne Carter 1 collaboration

Brenda Grogan 1 collaboration

Michael J Welsh 1 collaboration

David A Stoltz 1 collaboration

Christopher H Goss 1 collaboration

Dean Huang 1 collaboration

Noah Simon 1 collaboration

Jacob P Frick 1 collaboration

Snehal Joshi 1 collaboration

Cara Forsberg 1 collaboration

Adam Waalkes 1 collaboration

Elizabeth A Holmes 1 collaboration

Sara M Klee 1 collaboration

Mary J Emond 1 collaboration

Catherine A Tower 1 collaboration

Stanimir Kambarev 1 collaboration

Elizabeth Liu 1 collaboration

Lieselotte S M Kreuk 1 collaboration

Qiwen Chen 1 collaboration

Guilhem F Rerolle 1 collaboration

Shawn J Skerrett 1 collaboration

Joshua J Woodward 1 collaboration

Jean Celli 1 collaboration