Kathleen Marchal

Affiliations

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Department of Information Technology, IDLab, Ghent University, IMEC, Ghent, Belgium.

Publications (11)

IAMBEE: a web-service for the identification of adaptive pathways from parallel evolved clonal populations.

Nucleic acids research

Avec: Camilo Andres Perez-Romero , Bram Weytjens , Dries Decap , Toon Swings , Jan Michiels , Dries De Maeyer , Kathleen Marchal

A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay.

Food microbiology

Avec: Mathieu Gand , Wesley Mattheus , Nancy H C Roosens , Katelijne Dierick , Kathleen Marchal , Sigrid C J De Keersmaecker , Sophie Bertrand

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.

Foods (Basel, Switzerland)

Avec: Stéphanie Nouws , Bert Bogaerts , Bavo Verhaegen , Sarah Denayer , Florence Crombé , Klara De Rauw , Denis Piérard , Kathleen Marchal , Kevin Vanneste , Nancy H C Roosens , Sigrid C J De Keersmaecker

Culture-Independent Analysis of Linuron-Mineralizing Microbiota and Functions in on-Farm Biopurification Systems via DNA-Stable Isotope Probing: Comparison with Enrichment Culture.

Environmental science & technology

Avec: Harry Lerner , Başak Öztürk , Anja B Dohrmann , Joice Thomas , Kathleen Marchal , René De Mot , Wim Dehaen , Christoph C Tebbe , Dirk Springael

Dynamic partitioning of search patterns for approximate pattern matching using search schemes.

iScience

Avec: Luca Renders , Kathleen Marchal , Jan Fostier

Extracting functional insights from loss-of-function screens using deep link prediction.

Cell reports methods

Avec: Pieter-Paul Strybol , Maarten Larmuseau , Louise de Schaetzen van Brienen , Tim Van den Bulcke , Kathleen Marchal

OMEN: network-based driver gene identification using mutual exclusivity.

Bioinformatics (Oxford, England)

Avec: Dries Van Daele , Bram Weytjens , Luc De Raedt , Kathleen Marchal

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks.

Frontiers in microbiology

Avec: Stéphanie Nouws , Bert Bogaerts , Bavo Verhaegen , Sarah Denayer , Lasse Laeremans , Kathleen Marchal , Nancy H C Roosens , Kevin Vanneste , Sigrid C J De Keersmaecker

Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities.

Scientific data

Avec: Alexander Van Uffelen , Andrés Posadas , Nancy H C Roosens , Kathleen Marchal , Sigrid C J De Keersmaecker , Kevin Vanneste

Antibiotic Cycling Affects Resistance Evolution Independently of Collateral Sensitivity.

Molecular biology and evolution

Avec: Pauline Brepoels , Kenny Appermans , Camilo Andres Pérez-Romero , Bram Lories , Kathleen Marchal , Hans P Steenackers

Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study.

Foods (Basel, Switzerland)

Avec: Florence E Buytaers , Bavo Verhaegen , Mathieu Gand , Jolien D'aes , Kevin Vanneste , Nancy H C Roosens , Kathleen Marchal , Sarah Denayer , Sigrid C J De Keersmaecker

Réseau de co-auteurs

Nancy H C Roosens 5 collaborations

Sigrid C J De Keersmaecker 5 collaborations

Kevin Vanneste 4 collaborations

Bavo Verhaegen 3 collaborations

Sarah Denayer 3 collaborations

Bram Weytjens 2 collaborations

Mathieu Gand 2 collaborations

Stéphanie Nouws 2 collaborations

Bert Bogaerts 2 collaborations

Camilo Andres Perez-Romero 1 collaboration

Dries Decap 1 collaboration

Toon Swings 1 collaboration

Jan Michiels 1 collaboration

Dries De Maeyer 1 collaboration

Wesley Mattheus 1 collaboration

Katelijne Dierick 1 collaboration

Sophie Bertrand 1 collaboration

Florence Crombé 1 collaboration

Klara De Rauw 1 collaboration

Denis Piérard 1 collaboration

Harry Lerner 1 collaboration

Başak Öztürk 1 collaboration

Anja B Dohrmann 1 collaboration

Joice Thomas 1 collaboration

René De Mot 1 collaboration

Wim Dehaen 1 collaboration

Christoph C Tebbe 1 collaboration

Dirk Springael 1 collaboration

Luca Renders 1 collaboration

Jan Fostier 1 collaboration

Pieter-Paul Strybol 1 collaboration

Maarten Larmuseau 1 collaboration

Louise de Schaetzen van Brienen 1 collaboration

Tim Van den Bulcke 1 collaboration

Dries Van Daele 1 collaboration

Luc De Raedt 1 collaboration

Lasse Laeremans 1 collaboration

Alexander Van Uffelen 1 collaboration

Andrés Posadas 1 collaboration

Pauline Brepoels 1 collaboration

Kenny Appermans 1 collaboration

Camilo Andres Pérez-Romero 1 collaboration

Bram Lories 1 collaboration

Hans P Steenackers 1 collaboration

Florence E Buytaers 1 collaboration

Jolien D'aes 1 collaboration