Dylan Kotliar

Affiliations

Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology, Cambridge, MA 02142, USA.
Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

ORCID: 0000-0002-7968-645X

Publications (12)

Sciviewer enables interactive visual interrogation of single-cell RNA-Seq data from the Python programming environment.

Bioinformatics (Oxford, England)

Avec: Dylan Kotliar , Andrés Colubri

Single-Cell Profiling of Ebola Virus Disease In Vivo Reveals Viral and Host Dynamics.

Cell

Avec: Dylan Kotliar , Aaron E Lin , James Logue , Travis K Hughes , Nadine M Khoury , Siddharth S Raju , Marc H Wadsworth , Han Chen , Jonathan R Kurtz , Bonnie Dighero-Kemp , Zach B Bjornson , Nilanjan Mukherjee , Brian A Sellers , Nancy Tran , Matthew R Bauer , Gordon C Adams , Ricky Adams , John L Rinn , Marta Melé , Stephen F Schaffner , Garry P Nolan , Kayla G Barnes , Lisa E Hensley , David R McIlwain , Alex K Shalek , Pardis C Sabeti , Richard S Bennett

Nonablative Fractional Laser Treatment Is Associated With a Decreased Risk of Subsequent Facial Keratinocyte Carcinoma Development.

Dermatologic surgery : official publication for American Society for Dermatologic Surgery [et al.]

Avec: Travis A Benson , Brian P Hibler , Dylan Kotliar , Mathew Avram

High crossreactivity of human T cell responses between Lassa virus lineages.

PLoS pathogens

Avec: Brian M Sullivan , Saori Sakabe , Jessica N Hartnett , Nhi Ngo , Augustine Goba , Mambu Momoh , John Demby Sandi , Lansana Kanneh , Beatrice Cubitt , Selma D Garcia , Brian C Ware , Dylan Kotliar , Refugio Robles-Sikisaka , Karthik Gangavarapu , Luis Branco , Philomena Eromon , Ikponmwosa Odia , Ephraim Ogbaini-Emovon , Onikepe Folarin , Sylvanus Okogbenin , Peter O Okokhere , Christian Happi , Juan Carlos de la Torre , Pardis C Sabeti , Kristian G Andersen , Robert F Garry , Donald S Grant , John S Schieffelin , Michael B A Oldstone

Genome-wide association study identifies human genetic variants associated with fatal outcome from Lassa fever.

Nature microbiology

Avec: Dylan Kotliar , Siddharth Raju , Shervin Tabrizi , Ikponmwosa Odia , Augustine Goba , Mambu Momoh , John Demby Sandi , Parvathy Nair , Eric Phelan , Ridhi Tariyal , Philomena E Eromon , Samar Mehta , Refugio Robles-Sikisaka , Katherine J Siddle , Matt Stremlau , Simbirie Jalloh , Stephen K Gire , Sarah Winnicki , Bridget Chak , Stephen F Schaffner , Matthias Pauthner , Elinor K Karlsson , Sarah R Chapin , Sharon G Kennedy , Luis M Branco , Lansana Kanneh , Joseph J Vitti , Nisha Broodie , Adrianne Gladden-Young , Omowunmi Omoniwa , Pan-Pan Jiang , Nathan Yozwiak , Shannon Heuklom , Lina M Moses , George O Akpede , Danny A Asogun , Kathleen Rubins , Susan Kales , Anise N Happi , Christopher O Iruolagbe , Mercy Dic-Ijiewere , Kelly Iraoyah , Omoregie O Osazuwa , Alexander K Okonkwo , Stefan Kunz , Joseph B McCormick , S Humarr Khan , Anna N Honko , Eric S Lander , Michael B A Oldstone , Lisa Hensley , Onikepe A Folarin , Sylvanus A Okogbenin , Stephan Günther , Hanna M Ollila , Ryan Tewhey , Peter O Okokhere , John S Schieffelin , Kristian G Andersen , Steven K Reilly , Donald S Grant , Robert F Garry , Kayla G Barnes , Christian T Happi , Pardis C Sabeti

Reproducible single cell annotation of programs underlying T-cell subsets, activation states, and functions.

bioRxiv : the preprint server for biology

Avec: Dylan Kotliar , Michelle Curtis , Ryan Agnew , Kathryn Weinand , Aparna Nathan , Yuriy Baglaenko , Yu Zhao , Pardis C Sabeti , Deepak A Rao , Soumya Raychaudhuri

Three linked variants have opposing regulatory effects on isovaleryl-CoA dehydrogenase gene expression.

Human molecular genetics

Avec: Elizabeth A Brown , Susan Kales , Michael James Boyle , Joseph Vitti , Dylan Kotliar , Steve Schaffner , Ryan Tewhey , Pardis C Sabeti

The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response.

Viruses

Avec: Yolanda Botti-Lodovico , Parvathy Nair , Dolo Nosamiefan , Matthew Stremlau , Stephen Schaffner , Sebastian V Agignoae , John Oke Aiyepada , Fehintola V Ajogbasile , George O Akpede , Foday Alhasan , Kristian G Andersen , Danny A Asogun , Oladele Oluwafemi Ayodeji , Aida S Badiane , Kayla Barnes , Matthew R Bauer , Antoinette Bell-Kareem , Muoebonam Ekene Benard , Ebo Ohomoime Benevolence , Osiemi Blessing , Chloe K Boehm , Matthew L Boisen , Nell G Bond , Luis M Branco , Michael J Butts , Amber Carter , Andres Colubri , Awa B Deme , Katherine C DeRuff , Younousse Diédhiou , Akhilomen Patience Edamhande , Siham Elhamoumi , Emily J Engel , Philomena Eromon , Mosoka Fallah , Onikepe A Folarin , Ben Fry , Robert Garry , Amy Gaye , Michael Gbakie , Sahr M Gevao , Gabrielle Gionet , Adrianne Gladden-Young , Augustine Goba , Jules Francois Gomis , Anise N Happi , Mary Houghton , Chikwe Ihekwuazu , Christopher Ojemiega Iruolagbe , Jonathan Jackson , Simbirie Jalloh , Jeremy Johnson , Lansana Kanneh , Adeyemi Kayode , Molly Kemball , Ojide Chiedozie Kingsley , Veronica Koroma , Dylan Kotliar , Samar Mehta , Hayden C Metsky , Airende Michael , Marzieh Ezzaty Mirhashemi , Kayvon Modjarrad , Mambu Momoh , Cameron A Myhrvold , Okonofua Grace Naregose , Tolla Ndiaye , Mouhamadou Ndiaye , Aliou Ndiaye , Erica Normandin , Ikponmwosa Odia , Judith Uche Oguzie , Sylvanus A Okogbenin , Peter O Okokhere , Johnson Okolie , Idowu B Olawoye , Testimony J Olumade , Paul E Oluniyi , Omigie Omoregie , Daniel J Park , Mariétou Faye Paye , Brittany Petros , Anthony A Philippakis , Abechi Priscilla , Alan Ricks , Anne Rimoin , John Demby Sandi , John S Schieffelin , Monica Schreiber , Mame Cheikh Seck , Sameed Siddiqui , Katherine Siddle , Allison R Smither , Mouhamad Sy , Ngayo Sy , Christopher H Tomkins-Tinch , Oyewale Tomori , Chinedu Ugwu , Jessica N Uwanibe , Eghosasere Anthonia Uyigue , Dada Ireti Victoria , Anika Vinzé , Megan E Vodzak , Nicole Welch , Haja Isatta Wurie , Daba Zoumarou , Donald S Grant , Daouda Ndiaye , Bronwyn MacInnis , Pardis C Sabeti , Christian Happi

A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease.

Nature immunology

Avec: Tom Thomas , Matthias Friedrich , Charlotte Rich-Griffin , Mathilde Pohin , Devika Agarwal , Julia Pakpoor , Carl Lee , Ruchi Tandon , Aniko Rendek , Dominik Aschenbrenner , Ashwin Jainarayanan , Alexandru Voda , Jacqueline H Y Siu , Raphael Sanches-Peres , Eloise Nee , Dharshan Sathananthan , Dylan Kotliar , Peter Todd , Maria Kiourlappou , Lisa Gartner , Nicholas Ilott , Fadi Issa , Joanna Hester , Jason Turner , Saba Nayar , Jonas Mackerodt , Fan Zhang , Anna Jonsson , Michael Brenner , Soumya Raychaudhuri , Ruth Kulicke , Danielle Ramsdell , Nicolas Stransky , Ray Pagliarini , Piotr Bielecki , Noah Spies , Brian Marsden , Stephen Taylor , Allon Wagner , Paul Klenerman , Alissa Walsh , Mark Coles , Luke Jostins-Dean , Fiona M Powrie , Andrew Filer , Simon Travis , Holm H Uhlig , Calliope A Dendrou , Christopher D Buckley

Identification of Common CD8

Journal of virology

Avec: Saori Sakabe , Jessica N Hartnett , Nhi Ngo , Augustine Goba , Mambu Momoh , John Demby Sandi , Lansana Kanneh , Beatrice Cubitt , Selma D Garcia , Brian C Ware , Dylan Kotliar , Refugio Robles-Sikisaka , Karthik Gangavarapu , Luis M Branco , Philomena Eromon , Ikponmwosa Odia , Ephraim Ogbaini-Emovon , Onikepe Folarin , Sylvanus Okogbenin , Peter O Okokhere , Christian Happi , Pardis C Sabeti , Kristian G Andersen , Robert F Garry , Juan Carlos de la Torre , Donald S Grant , John S Schieffelin , Michael B A Oldstone , Brian M Sullivan

Identifying gene expression programs of cell-type identity and cellular activity with single-cell RNA-Seq.

eLife

Avec: Dylan Kotliar , Adrian Veres , M Aurel Nagy , Shervin Tabrizi , Eran Hodis , Douglas A Melton , Pardis C Sabeti

Natural history of Ebola virus disease in rhesus monkeys shows viral variant emergence dynamics and tissue-specific host responses.

Cell genomics

Avec: Erica Normandin , Sergio Triana , Siddharth S Raju , Tammy C T Lan , Kim Lagerborg , Melissa Rudy , Gordon C Adams , Katherine C DeRuff , James Logue , David Liu , Daniel Strebinger , Arya Rao , Katelyn S Messer , Molly Sacks , Ricky D Adams , Krisztina Janosko , Dylan Kotliar , Rickey Shah , Ian Crozier , John L Rinn , Marta Melé , Anna N Honko , Feng Zhang , Mehrtash Babadi , Jeremy Luban , Richard S Bennett , Alex K Shalek , Nikolaos Barkas , Aaron E Lin , Lisa E Hensley , Pardis C Sabeti , Katherine J Siddle

Réseau de co-auteurs

Pardis C Sabeti 9 collaborations

Augustine Goba 4 collaborations

Mambu Momoh 4 collaborations

John Demby Sandi 4 collaborations

Lansana Kanneh 4 collaborations

Ikponmwosa Odia 4 collaborations

Peter O Okokhere 4 collaborations

Kristian G Andersen 4 collaborations

Donald S Grant 4 collaborations

John S Schieffelin 4 collaborations

Refugio Robles-Sikisaka 3 collaborations

Philomena Eromon 3 collaborations

Christian Happi 3 collaborations

Robert F Garry 3 collaborations

Michael B A Oldstone 3 collaborations

Luis M Branco 3 collaborations

Aaron E Lin 2 collaborations

James Logue 2 collaborations

Siddharth S Raju 2 collaborations

Matthew R Bauer 2 collaborations

Gordon C Adams 2 collaborations

John L Rinn 2 collaborations

Marta Melé 2 collaborations

Stephen F Schaffner 2 collaborations

Kayla G Barnes 2 collaborations

Lisa E Hensley 2 collaborations

Alex K Shalek 2 collaborations

Richard S Bennett 2 collaborations

Brian M Sullivan 2 collaborations

Saori Sakabe 2 collaborations

Jessica N Hartnett 2 collaborations

Nhi Ngo 2 collaborations

Beatrice Cubitt 2 collaborations

Selma D Garcia 2 collaborations

Brian C Ware 2 collaborations

Karthik Gangavarapu 2 collaborations

Ephraim Ogbaini-Emovon 2 collaborations

Onikepe Folarin 2 collaborations

Sylvanus Okogbenin 2 collaborations

Juan Carlos de la Torre 2 collaborations

Shervin Tabrizi 2 collaborations

Parvathy Nair 2 collaborations

Samar Mehta 2 collaborations

Katherine J Siddle 2 collaborations

Simbirie Jalloh 2 collaborations

Adrianne Gladden-Young 2 collaborations

George O Akpede 2 collaborations

Danny A Asogun 2 collaborations

Susan Kales 2 collaborations

Anise N Happi 2 collaborations

Anna N Honko 2 collaborations

Onikepe A Folarin 2 collaborations

Sylvanus A Okogbenin 2 collaborations

Ryan Tewhey 2 collaborations

Soumya Raychaudhuri 2 collaborations

Katherine C DeRuff 2 collaborations

Erica Normandin 2 collaborations

Andrés Colubri 1 collaboration

Travis K Hughes 1 collaboration

Nadine M Khoury 1 collaboration

Marc H Wadsworth 1 collaboration

Han Chen 1 collaboration

Jonathan R Kurtz 1 collaboration

Bonnie Dighero-Kemp 1 collaboration

Zach B Bjornson 1 collaboration

Nilanjan Mukherjee 1 collaboration

Brian A Sellers 1 collaboration

Nancy Tran 1 collaboration

Ricky Adams 1 collaboration

Garry P Nolan 1 collaboration

David R McIlwain 1 collaboration

Travis A Benson 1 collaboration

Brian P Hibler 1 collaboration

Mathew Avram 1 collaboration

Luis Branco 1 collaboration

Siddharth Raju 1 collaboration

Eric Phelan 1 collaboration

Ridhi Tariyal 1 collaboration

Philomena E Eromon 1 collaboration

Matt Stremlau 1 collaboration

Stephen K Gire 1 collaboration

Sarah Winnicki 1 collaboration

Bridget Chak 1 collaboration

Matthias Pauthner 1 collaboration

Elinor K Karlsson 1 collaboration

Sarah R Chapin 1 collaboration

Sharon G Kennedy 1 collaboration

Joseph J Vitti 1 collaboration

Nisha Broodie 1 collaboration

Omowunmi Omoniwa 1 collaboration

Pan-Pan Jiang 1 collaboration

Nathan Yozwiak 1 collaboration

Shannon Heuklom 1 collaboration

Lina M Moses 1 collaboration

Kathleen Rubins 1 collaboration

Christopher O Iruolagbe 1 collaboration

Mercy Dic-Ijiewere 1 collaboration

Kelly Iraoyah 1 collaboration

Omoregie O Osazuwa 1 collaboration

Alexander K Okonkwo 1 collaboration

Stefan Kunz 1 collaboration

Joseph B McCormick 1 collaboration

S Humarr Khan 1 collaboration

Eric S Lander 1 collaboration

Lisa Hensley 1 collaboration

Stephan Günther 1 collaboration

Hanna M Ollila 1 collaboration

Steven K Reilly 1 collaboration

Christian T Happi 1 collaboration

Michelle Curtis 1 collaboration

Ryan Agnew 1 collaboration

Kathryn Weinand 1 collaboration

Aparna Nathan 1 collaboration

Yuriy Baglaenko 1 collaboration

Yu Zhao 1 collaboration

Deepak A Rao 1 collaboration

Elizabeth A Brown 1 collaboration

Michael James Boyle 1 collaboration

Joseph Vitti 1 collaboration

Steve Schaffner 1 collaboration

Yolanda Botti-Lodovico 1 collaboration

Dolo Nosamiefan 1 collaboration

Matthew Stremlau 1 collaboration

Stephen Schaffner 1 collaboration

Sebastian V Agignoae 1 collaboration

John Oke Aiyepada 1 collaboration

Fehintola V Ajogbasile 1 collaboration

Foday Alhasan 1 collaboration

Oladele Oluwafemi Ayodeji 1 collaboration

Aida S Badiane 1 collaboration

Kayla Barnes 1 collaboration

Antoinette Bell-Kareem 1 collaboration

Muoebonam Ekene Benard 1 collaboration

Ebo Ohomoime Benevolence 1 collaboration

Osiemi Blessing 1 collaboration

Chloe K Boehm 1 collaboration

Matthew L Boisen 1 collaboration

Nell G Bond 1 collaboration

Michael J Butts 1 collaboration

Amber Carter 1 collaboration

Andres Colubri 1 collaboration

Awa B Deme 1 collaboration

Younousse Diédhiou 1 collaboration

Akhilomen Patience Edamhande 1 collaboration

Siham Elhamoumi 1 collaboration

Emily J Engel 1 collaboration

Mosoka Fallah 1 collaboration

Ben Fry 1 collaboration

Robert Garry 1 collaboration

Amy Gaye 1 collaboration

Michael Gbakie 1 collaboration

Sahr M Gevao 1 collaboration

Gabrielle Gionet 1 collaboration

Jules Francois Gomis 1 collaboration

Mary Houghton 1 collaboration

Chikwe Ihekwuazu 1 collaboration

Christopher Ojemiega Iruolagbe 1 collaboration

Jonathan Jackson 1 collaboration

Jeremy Johnson 1 collaboration

Adeyemi Kayode 1 collaboration

Molly Kemball 1 collaboration

Ojide Chiedozie Kingsley 1 collaboration

Veronica Koroma 1 collaboration

Hayden C Metsky 1 collaboration

Airende Michael 1 collaboration

Marzieh Ezzaty Mirhashemi 1 collaboration

Kayvon Modjarrad 1 collaboration

Cameron A Myhrvold 1 collaboration

Okonofua Grace Naregose 1 collaboration

Tolla Ndiaye 1 collaboration

Mouhamadou Ndiaye 1 collaboration

Aliou Ndiaye 1 collaboration

Judith Uche Oguzie 1 collaboration

Johnson Okolie 1 collaboration

Idowu B Olawoye 1 collaboration

Testimony J Olumade 1 collaboration

Paul E Oluniyi 1 collaboration

Omigie Omoregie 1 collaboration

Daniel J Park 1 collaboration

Mariétou Faye Paye 1 collaboration

Brittany Petros 1 collaboration

Anthony A Philippakis 1 collaboration

Abechi Priscilla 1 collaboration

Alan Ricks 1 collaboration

Anne Rimoin 1 collaboration

Monica Schreiber 1 collaboration

Mame Cheikh Seck 1 collaboration

Sameed Siddiqui 1 collaboration

Katherine Siddle 1 collaboration

Allison R Smither 1 collaboration

Mouhamad Sy 1 collaboration

Ngayo Sy 1 collaboration

Christopher H Tomkins-Tinch 1 collaboration

Oyewale Tomori 1 collaboration

Chinedu Ugwu 1 collaboration

Jessica N Uwanibe 1 collaboration

Eghosasere Anthonia Uyigue 1 collaboration

Dada Ireti Victoria 1 collaboration

Anika Vinzé 1 collaboration

Megan E Vodzak 1 collaboration

Nicole Welch 1 collaboration

Haja Isatta Wurie 1 collaboration

Daba Zoumarou 1 collaboration

Daouda Ndiaye 1 collaboration

Bronwyn MacInnis 1 collaboration

Tom Thomas 1 collaboration

Matthias Friedrich 1 collaboration

Charlotte Rich-Griffin 1 collaboration

Mathilde Pohin 1 collaboration

Devika Agarwal 1 collaboration

Julia Pakpoor 1 collaboration

Carl Lee 1 collaboration

Ruchi Tandon 1 collaboration

Aniko Rendek 1 collaboration

Dominik Aschenbrenner 1 collaboration

Ashwin Jainarayanan 1 collaboration

Alexandru Voda 1 collaboration

Jacqueline H Y Siu 1 collaboration

Raphael Sanches-Peres 1 collaboration

Eloise Nee 1 collaboration

Dharshan Sathananthan 1 collaboration

Peter Todd 1 collaboration

Maria Kiourlappou 1 collaboration

Lisa Gartner 1 collaboration

Nicholas Ilott 1 collaboration

Fadi Issa 1 collaboration

Joanna Hester 1 collaboration

Jason Turner 1 collaboration

Saba Nayar 1 collaboration

Jonas Mackerodt 1 collaboration

Fan Zhang 1 collaboration

Anna Jonsson 1 collaboration

Michael Brenner 1 collaboration

Ruth Kulicke 1 collaboration

Danielle Ramsdell 1 collaboration

Nicolas Stransky 1 collaboration

Ray Pagliarini 1 collaboration

Piotr Bielecki 1 collaboration

Noah Spies 1 collaboration

Brian Marsden 1 collaboration

Stephen Taylor 1 collaboration

Allon Wagner 1 collaboration

Paul Klenerman 1 collaboration

Alissa Walsh 1 collaboration

Mark Coles 1 collaboration

Luke Jostins-Dean 1 collaboration

Fiona M Powrie 1 collaboration

Andrew Filer 1 collaboration

Simon Travis 1 collaboration

Holm H Uhlig 1 collaboration

Calliope A Dendrou 1 collaboration

Christopher D Buckley 1 collaboration

Adrian Veres 1 collaboration

M Aurel Nagy 1 collaboration

Eran Hodis 1 collaboration

Douglas A Melton 1 collaboration

Sergio Triana 1 collaboration

Tammy C T Lan 1 collaboration

Kim Lagerborg 1 collaboration

Melissa Rudy 1 collaboration

David Liu 1 collaboration

Daniel Strebinger 1 collaboration

Arya Rao 1 collaboration

Katelyn S Messer 1 collaboration

Molly Sacks 1 collaboration

Ricky D Adams 1 collaboration

Krisztina Janosko 1 collaboration

Rickey Shah 1 collaboration

Ian Crozier 1 collaboration

Feng Zhang 1 collaboration

Mehrtash Babadi 1 collaboration

Jeremy Luban 1 collaboration

Nikolaos Barkas 1 collaboration