Bojan Zagrovic

Affiliations

Department of Structural and Computational Biology, Max Perutz Labs, University of Vienna, Vienna A-1030, Austria bojan.zagrovic@univie.ac.at.

Publications (18)

Frameshifting preserves key physicochemical properties of proteins.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Lukas Bartonek , Daniel Braun , Bojan Zagrovic

Compositional complementarity between genomic RNA and coat proteins in positive-sense single-stranded RNA viruses.

Nucleic acids research

Avec: Marlene Adlhart , Florian Poetsch , Mario Hlevnjak , Megan Hoogmoed , Anton A Polyansky , Bojan Zagrovic

Direct interplay between stereochemistry and conformational preferences in aminoacylated oligoribonucleotides.

Nucleic acids research

Avec: Anton A Polyansky , Mathias Kreuter , John D Sutherland , Bojan Zagrovic

The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators.

Nature communications

Avec: Lisa-Marie Appel , Vedran Franke , Johannes Benedum , Irina Grishkovskaya , Xué Strobl , Anton Polyansky , Gregor Ammann , Sebastian Platzer , Andrea Neudolt , Anna Wunder , Lena Walch , Stefanie Kaiser , Bojan Zagrovic , Kristina Djinovic-Carugo , Altuna Akalin , Dea Slade

Driving forces behind phase separation of the carboxy-terminal domain of RNA polymerase II.

Nature communications

Avec: David Flores-Solis , Irina P Lushpinskaia , Anton A Polyansky , Arya Changiarath , Marc Boehning , Milana Mirkovic , James Walshe , Lisa M Pietrek , Patrick Cramer , Lukas S Stelzl , Bojan Zagrovic , Markus Zweckstetter

VOLPES: an interactive web-based tool for visualizing and comparing physicochemical properties of biological sequences.

Nucleic acids research

Avec: Lukas Bartonek , Bojan Zagrovic

Protein compactness and interaction valency define the architecture of a biomolecular condensate across scales.

eLife

Avec: Anton A Polyansky , Laura D Gallego , Roman G Efremov , Alwin Köhler , Bojan Zagrovic

An Atomistic View on the Mechanism of Diatom Peptide-Guided Biomimetic Silica Formation.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Avec: Fanny Kozak , Dörte Brandis , Christopher Pötzl , Ludovica M Epasto , Daniela Reichinger , Dominik Obrist , Herwig Peterlik , Anton Polyansky , Bojan Zagrovic , Fabian Daus , Armin Geyer , Christian Fw Becker , Dennis Kurzbach

Configurational Entropy Components and Their Contribution to Biomolecular Complex Formation.

Journal of chemical theory and computation

Avec: Markus Fleck , Bojan Zagrovic

Atomistic mechanism of the constitutive activation of PDGFRA via its transmembrane domain.

Biochimica et biophysica acta. General subjects

Avec: Anton A Polyansky , Eduard V Bocharov , Amélie I Velghe , Andrey S Kuznetsov , Olga V Bocharova , Anatoly S Urban , Alexander S Arseniev , Bojan Zagrovic , Jean-Baptiste Demoulin , Roman G Efremov

Interaction preferences between protein side chains and key epigenetic modifications 5-methylcytosine, 5-hydroxymethycytosine and N

Scientific reports

Avec: Matea Hajnic , Santiago Alonso-Gil , Anton A Polyansky , Anita de Ruiter , Bojan Zagrovic

The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation.

Nature communications

Avec: Johannes Benedum , Vedran Franke , Lisa-Marie Appel , Lena Walch , Melania Bruno , Rebecca Schneeweiss , Juliane Gruber , Helena Oberndorfer , Emma Frank , Xué Strobl , Anton Polyansky , Bojan Zagrovic , Altuna Akalin , Dea Slade

RNA polymerase II-binding aptamers in human ACRO1 satellites disrupt transcription

Transcription

Avec: Jennifer L Boots , Frederike von Pelchrzim , Adam Weiss , Bob Zimmermann , Theres Friesacher , Maximilian Radtke , Marek Żywicki , Doris Chen , Katarzyna Matylla-Kulińska , Bojan Zagrovic , Renée Schroeder

Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with α-actinin.

Science advances

Avec: Antonio Sponga , Joan L Arolas , Thomas C Schwarz , Cy M Jeffries , Ariadna Rodriguez Chamorro , Julius Kostan , Andrea Ghisleni , Friedel Drepper , Anton Polyansky , Euripedes De Almeida Ribeiro , Miriam Pedron , Anna Zawadzka-Kazimierczuk , Georg Mlynek , Thomas Peterbauer , Pierantonio Doto , Claudia Schreiner , Eneda Hollerl , Borja Mateos , Leonhard Geist , Georgine Faulkner , Wiktor Kozminski , Dmitri I Svergun , Bettina Warscheid , Bojan Zagrovic , Mathias Gautel , Robert Konrat , Kristina Djinović-Carugo

POSTAR3: an updated platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins.

Nucleic acids research

Avec: Weihao Zhao , Shang Zhang , Yumin Zhu , Xiaochen Xi , Pengfei Bao , Ziyuan Ma , Thomas H Kapral , Shuyuan Chen , Bojan Zagrovic , Yucheng T Yang , Zhi John Lu

Widespread autogenous mRNA-protein interactions detected by CLIP-seq.

Nucleic acids research

Avec: Thomas H Kapral , Fiona Farnhammer , Weihao Zhao , Zhi J Lu , Bojan Zagrovic

Coding From Binding? Molecular Interactions at the Heart of Translation.

Annual review of biophysics

Avec: Bojan Zagrovic , Marlene Adlhart , Thomas H Kapral

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Molecular cell

Avec: Ewelina Guca , Rodrigo Alarcon , Michael Z Palo , Leonardo Santos , Santiago Alonso-Gil , Marcos Davyt , Leonardo H F de Lima , Fanny Boissier , Sarada Das , Bojan Zagrovic , Joseph D Puglisi , Yaser Hashem , Zoya Ignatova

Réseau de co-auteurs

Anton A Polyansky 6 collaborations

Anton Polyansky 4 collaborations

Thomas H Kapral 3 collaborations

Lukas Bartonek 2 collaborations

Marlene Adlhart 2 collaborations

Lisa-Marie Appel 2 collaborations

Vedran Franke 2 collaborations

Johannes Benedum 2 collaborations

Xué Strobl 2 collaborations

Lena Walch 2 collaborations

Altuna Akalin 2 collaborations

Dea Slade 2 collaborations

Roman G Efremov 2 collaborations

Santiago Alonso-Gil 2 collaborations

Weihao Zhao 2 collaborations

Daniel Braun 1 collaboration

Florian Poetsch 1 collaboration

Mario Hlevnjak 1 collaboration

Megan Hoogmoed 1 collaboration

Mathias Kreuter 1 collaboration

John D Sutherland 1 collaboration

Irina Grishkovskaya 1 collaboration

Gregor Ammann 1 collaboration

Sebastian Platzer 1 collaboration

Andrea Neudolt 1 collaboration

Anna Wunder 1 collaboration

Stefanie Kaiser 1 collaboration

Kristina Djinovic-Carugo 1 collaboration

David Flores-Solis 1 collaboration

Irina P Lushpinskaia 1 collaboration

Arya Changiarath 1 collaboration

Marc Boehning 1 collaboration

Milana Mirkovic 1 collaboration

James Walshe 1 collaboration

Lisa M Pietrek 1 collaboration

Patrick Cramer 1 collaboration

Lukas S Stelzl 1 collaboration

Markus Zweckstetter 1 collaboration

Laura D Gallego 1 collaboration

Alwin Köhler 1 collaboration

Fanny Kozak 1 collaboration

Dörte Brandis 1 collaboration

Christopher Pötzl 1 collaboration

Ludovica M Epasto 1 collaboration

Daniela Reichinger 1 collaboration

Dominik Obrist 1 collaboration

Herwig Peterlik 1 collaboration

Fabian Daus 1 collaboration

Armin Geyer 1 collaboration

Christian Fw Becker 1 collaboration

Dennis Kurzbach 1 collaboration

Markus Fleck 1 collaboration

Eduard V Bocharov 1 collaboration

Amélie I Velghe 1 collaboration

Andrey S Kuznetsov 1 collaboration

Olga V Bocharova 1 collaboration

Anatoly S Urban 1 collaboration

Alexander S Arseniev 1 collaboration

Jean-Baptiste Demoulin 1 collaboration

Matea Hajnic 1 collaboration

Anita de Ruiter 1 collaboration

Melania Bruno 1 collaboration

Rebecca Schneeweiss 1 collaboration

Juliane Gruber 1 collaboration

Helena Oberndorfer 1 collaboration

Emma Frank 1 collaboration

Jennifer L Boots 1 collaboration

Frederike von Pelchrzim 1 collaboration

Adam Weiss 1 collaboration

Bob Zimmermann 1 collaboration

Theres Friesacher 1 collaboration

Maximilian Radtke 1 collaboration

Marek Żywicki 1 collaboration

Doris Chen 1 collaboration

Katarzyna Matylla-Kulińska 1 collaboration

Renée Schroeder 1 collaboration

Antonio Sponga 1 collaboration

Joan L Arolas 1 collaboration

Thomas C Schwarz 1 collaboration

Cy M Jeffries 1 collaboration

Ariadna Rodriguez Chamorro 1 collaboration

Julius Kostan 1 collaboration

Andrea Ghisleni 1 collaboration

Friedel Drepper 1 collaboration

Euripedes De Almeida Ribeiro 1 collaboration

Miriam Pedron 1 collaboration

Anna Zawadzka-Kazimierczuk 1 collaboration

Georg Mlynek 1 collaboration

Thomas Peterbauer 1 collaboration

Pierantonio Doto 1 collaboration

Claudia Schreiner 1 collaboration

Eneda Hollerl 1 collaboration

Borja Mateos 1 collaboration

Leonhard Geist 1 collaboration

Georgine Faulkner 1 collaboration

Wiktor Kozminski 1 collaboration

Dmitri I Svergun 1 collaboration

Bettina Warscheid 1 collaboration

Mathias Gautel 1 collaboration

Robert Konrat 1 collaboration

Kristina Djinović-Carugo 1 collaboration

Shang Zhang 1 collaboration

Yumin Zhu 1 collaboration

Xiaochen Xi 1 collaboration

Pengfei Bao 1 collaboration

Ziyuan Ma 1 collaboration

Shuyuan Chen 1 collaboration

Yucheng T Yang 1 collaboration

Zhi John Lu 1 collaboration

Fiona Farnhammer 1 collaboration

Zhi J Lu 1 collaboration

Ewelina Guca 1 collaboration

Rodrigo Alarcon 1 collaboration

Michael Z Palo 1 collaboration

Leonardo Santos 1 collaboration

Marcos Davyt 1 collaboration

Leonardo H F de Lima 1 collaboration

Fanny Boissier 1 collaboration

Sarada Das 1 collaboration

Joseph D Puglisi 1 collaboration

Yaser Hashem 1 collaboration

Zoya Ignatova 1 collaboration