Alexander Mitrofanov

Affiliations

Chair of Bioinformatics, University of Freiburg, Freiburg, Germany.

Publications (24)

PyRad: A software shell for simulating radiolysis with Qball package.

Journal of computational chemistry

Avec: Nikolai Andreadi , Artem Mitrofanov , Artem Eliseev , Petr Matveev , Stepan Kalmykov , Vladimir Petrov

Dynamic Acoustic Unit Augmentation with BPE-Dropout for Low-Resource End-to-End Speech Recognition.

Sensors (Basel, Switzerland)

Avec: Aleksandr Laptev , Andrei Andrusenko , Ivan Podluzhny , Anton Mitrofanov , Ivan Medennikov , Yuri Matveev

CRISPRidentify: identification of CRISPR arrays using machine learning approach.

Nucleic acids research

Avec: Alexander Mitrofanov , Omer S Alkhnbashi , Sergey A Shmakov , Kira S Makarova , Eugene V Koonin , Rolf Backofen

A search of a quantitative quantum-chemical approach for radiolytic stability prediction.

Physical chemistry chemical physics : PCCP

Avec: Anastasiia Smirnova , Artem Mitrofanov , Petr Matveev , Timur Baygildiev , Vladimir Petrov

Potential Neurophysiological Markers of Combat-Related Post-Traumatic Stress Disorder: A Cross-Sectional Diagnostic Study.

Consortium psychiatricum

Avec: Klavdiya Telesheva , Valeria Savenkova , Irina Morozova , Aleksandra Ochneva , Angelina Zeltser , Denis Andreyuk , Alexander Reznik , Vladimir Mukhin , Georgy Melkonyan , Karine Lytkina , Andrey Mitrofanov , Anna Morozova

Corrigendum: Neurophysiological hallmarks of Huntington's disease progression: an EEG and fMRI connectivity study.

Frontiers in aging neuroscience

Avec: Natalya V Ponomareva , Sergey A Klyushnikov , Natalia Abramycheva , Rodion N Konovalov , Marina Krotenkova , Ekaterina Kolesnikova , Daria Malina , Gusel Urazgildeeva , Elena Kanavets , Andrey Mitrofanov , Vitaly Fokin , Evgeny Rogaev , Sergey N Illarioshkin

Anti-CRISPR prediction using deep learning reveals an inhibitor of Cas13b nucleases.

Molecular cell

Avec: Katharina G Wandera , Omer S Alkhnbashi , Harris V I Bassett , Alexander Mitrofanov , Sven Hauns , Anzhela Migur , Rolf Backofen , Chase L Beisel

CRISPRloci: comprehensive and accurate annotation of CRISPR-Cas systems.

Nucleic acids research

Avec: Omer S Alkhnbashi , Alexander Mitrofanov , Robson Bonidia , Martin Raden , Van Dinh Tran , Florian Eggenhofer , Shiraz A Shah , Ekrem Öztürk , Victor A Padilha , Danilo S Sanches , André C P L F de Carvalho , Rolf Backofen

Size Doesn't Matter: Predicting Physico- or Biochemical Properties Based on Dozens of Molecules.

The journal of physical chemistry letters

Avec: Kirill Karpov , Artem Mitrofanov , Vadim Korolev , Valery Tkachenko

CRISPRtracrRNA: robust approach for CRISPR tracrRNA detection.

Bioinformatics (Oxford, England)

Avec: Alexander Mitrofanov , Marcus Ziemann , Omer S Alkhnbashi , Wolfgang R Hess , Rolf Backofen

Transcriptome Analysis of Human Glioblastoma Cells Susceptible to Infection with the Leningrad-16 Vaccine Strain of Measles Virus.

Viruses

Avec: Yulia Ammour , Olga Susova , George Krasnov , Eugenia Nikolaeva , Vyacheslav Varachev , Yulia Schetinina , Marina Gavrilova , Alexey Mitrofanov , Anna Poletaeva , Ali Bekyashev , Evgeny Faizuloev , Vitaly V Zverev , Oxana A Svitich , Tatiana V Nasedkina

Coarse-Grained Crystal Graph Neural Networks for Reticular Materials Design.

Journal of chemical information and modeling

Avec: Vadim Korolev , Artem Mitrofanov

The carbon footprint of predicting CO

iScience

Avec: Vadim Korolev , Artem Mitrofanov

SpacerPlacer: ancestral reconstruction of CRISPR arrays reveals the evolutionary dynamics of spacer deletions.

Nucleic acids research

Avec: Axel Fehrenbach , Alexander Mitrofanov , Omer S Alkhnbashi , Rolf Backofen , Franz Baumdicker

Genetic Association Between Alzheimer's Disease Risk Variant of the

Frontiers in neuroscience

Avec: Natalya Ponomareva , Tatiana Andreeva , Maria Protasova , Rodion Konovalov , Marina Krotenkova , Daria Malina , Andrey Mitrofanov , Vitaly Fokin , Sergey Illarioshkin , Evgeny Rogaev

Graph Convolutional Neural Networks as "General-Purpose" Property Predictors: The Universality and Limits of Applicability.

Journal of chemical information and modeling

Avec: Vadim Korolev , Artem Mitrofanov , Alexandru Korotcov , Valery Tkachenko

Heavy-Element Reactions Database (HERDB): Relativistic ab Initio Geometries and Energies for Actinide Compounds.

Inorganic chemistry

Avec: Nikolai Andreadi , Artem Mitrofanov , Petr Matveev , Anna Volkova , Stepan Kalmykov

Nonclassical Spin Transfer Effects in an Antiferromagnet.

Physical review letters

Avec: Alexander Mitrofanov , Sergei Urazhdin

Thin Films of Lanthanide Stearates as Modifiers of the Q-Sense Device Sensor for Studying Insulin Adsorption.

ACS omega

Avec: Olga Ladikan , Elena Silyavka , Andrei Mitrofanov , Anastasia Laptenkova , Vladimir Shilovskikh , Petr Kolonitckii , Nikita Ivanov , Andrey Remezov , Anna Fedorova , Vassily Khripun , Olga Pestova , Ekaterina P Podolskaya , Nikolai G Sukhodolov , Artem A Selyutin

Narrow Bandgap 1D Lead Iodide Perovskite with Aminophenyl Viologen.

Inorganic chemistry

Avec: Andrei Mitrofanov , Oliver Dreimann , Karina Zakirova , Albrecht L Waentig , Angelika Wrzesińska-Lashkova , Agnieszka Kuc , Michael Ruck , Yana Vaynzof , Xinliang Feng , Brigitte Voit

CRISPR-Cas bioinformatics.

Methods (San Diego, Calif.)

Avec: Omer S Alkhnbashi , Tobias Meier , Alexander Mitrofanov , Rolf Backofen , Björn Voß

Simple Automatized Tool for Exchange-Correlation Functional Fitting.

The journal of physical chemistry. A

Avec: Artem Mitrofanov , Vadim Korolev , Nikolai Andreadi , Vladimir Petrov , Stepan Kalmykov

A search for a DFT functional for actinide compounds.

The Journal of chemical physics

Avec: Artem Mitrofanov , Nikolai Andreadi , Vadim Korolev , Stepan Kalmykov

Achieving tunable chemical reactivity through photo-initiation of energetic materials at metal oxide surfaces.

Physical chemistry chemical physics : PCCP

Avec: Maija M Kuklja , Roman Tsyshevsky , Anton S Zverev , Anatoly Mitrofanov , Natalya Ilyakova , Denis R Nurmukhametov , Sergey N Rashkeev

Réseau de co-auteurs

Artem Mitrofanov 9 collaborations

Omer S Alkhnbashi 6 collaborations

Rolf Backofen 6 collaborations

Vadim Korolev 6 collaborations

Nikolai Andreadi 4 collaborations

Stepan Kalmykov 4 collaborations

Petr Matveev 3 collaborations

Vladimir Petrov 3 collaborations

Andrey Mitrofanov 3 collaborations

Marina Krotenkova 2 collaborations

Daria Malina 2 collaborations

Vitaly Fokin 2 collaborations

Evgeny Rogaev 2 collaborations

Valery Tkachenko 2 collaborations

Andrei Mitrofanov 2 collaborations

Artem Eliseev 1 collaboration

Aleksandr Laptev 1 collaboration

Andrei Andrusenko 1 collaboration

Ivan Podluzhny 1 collaboration

Anton Mitrofanov 1 collaboration

Ivan Medennikov 1 collaboration

Yuri Matveev 1 collaboration

Sergey A Shmakov 1 collaboration

Kira S Makarova 1 collaboration

Eugene V Koonin 1 collaboration

Anastasiia Smirnova 1 collaboration

Timur Baygildiev 1 collaboration

Klavdiya Telesheva 1 collaboration

Valeria Savenkova 1 collaboration

Irina Morozova 1 collaboration

Aleksandra Ochneva 1 collaboration

Angelina Zeltser 1 collaboration

Denis Andreyuk 1 collaboration

Alexander Reznik 1 collaboration

Vladimir Mukhin 1 collaboration

Georgy Melkonyan 1 collaboration

Karine Lytkina 1 collaboration

Anna Morozova 1 collaboration

Natalya V Ponomareva 1 collaboration

Sergey A Klyushnikov 1 collaboration

Natalia Abramycheva 1 collaboration

Rodion N Konovalov 1 collaboration

Ekaterina Kolesnikova 1 collaboration

Gusel Urazgildeeva 1 collaboration

Elena Kanavets 1 collaboration

Sergey N Illarioshkin 1 collaboration

Katharina G Wandera 1 collaboration

Harris V I Bassett 1 collaboration

Sven Hauns 1 collaboration

Anzhela Migur 1 collaboration

Chase L Beisel 1 collaboration

Robson Bonidia 1 collaboration

Martin Raden 1 collaboration

Van Dinh Tran 1 collaboration

Florian Eggenhofer 1 collaboration

Shiraz A Shah 1 collaboration

Ekrem Öztürk 1 collaboration

Victor A Padilha 1 collaboration

Danilo S Sanches 1 collaboration

André C P L F de Carvalho 1 collaboration

Kirill Karpov 1 collaboration

Marcus Ziemann 1 collaboration

Wolfgang R Hess 1 collaboration

Yulia Ammour 1 collaboration

Olga Susova 1 collaboration

George Krasnov 1 collaboration

Eugenia Nikolaeva 1 collaboration

Vyacheslav Varachev 1 collaboration

Yulia Schetinina 1 collaboration

Marina Gavrilova 1 collaboration

Alexey Mitrofanov 1 collaboration

Anna Poletaeva 1 collaboration

Ali Bekyashev 1 collaboration

Evgeny Faizuloev 1 collaboration

Vitaly V Zverev 1 collaboration

Oxana A Svitich 1 collaboration

Tatiana V Nasedkina 1 collaboration

Axel Fehrenbach 1 collaboration

Franz Baumdicker 1 collaboration

Natalya Ponomareva 1 collaboration

Tatiana Andreeva 1 collaboration

Maria Protasova 1 collaboration

Rodion Konovalov 1 collaboration

Sergey Illarioshkin 1 collaboration

Alexandru Korotcov 1 collaboration

Anna Volkova 1 collaboration

Sergei Urazhdin 1 collaboration

Olga Ladikan 1 collaboration

Elena Silyavka 1 collaboration

Anastasia Laptenkova 1 collaboration

Vladimir Shilovskikh 1 collaboration

Petr Kolonitckii 1 collaboration

Nikita Ivanov 1 collaboration

Andrey Remezov 1 collaboration

Anna Fedorova 1 collaboration

Vassily Khripun 1 collaboration

Olga Pestova 1 collaboration

Ekaterina P Podolskaya 1 collaboration

Nikolai G Sukhodolov 1 collaboration

Artem A Selyutin 1 collaboration

Oliver Dreimann 1 collaboration

Karina Zakirova 1 collaboration

Albrecht L Waentig 1 collaboration

Angelika Wrzesińska-Lashkova 1 collaboration

Agnieszka Kuc 1 collaboration

Michael Ruck 1 collaboration

Yana Vaynzof 1 collaboration

Xinliang Feng 1 collaboration

Brigitte Voit 1 collaboration

Tobias Meier 1 collaboration

Björn Voß 1 collaboration

Maija M Kuklja 1 collaboration

Roman Tsyshevsky 1 collaboration

Anton S Zverev 1 collaboration

Anatoly Mitrofanov 1 collaboration

Natalya Ilyakova 1 collaboration

Denis R Nurmukhametov 1 collaboration

Sergey N Rashkeev 1 collaboration