Adam Phillippy

Affiliations

Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.

ORCID: https://orcid.org/0000-0003-2983-8934

Publications (5)

Reference genome and demographic history of the most endangered marine mammal, the vaquita.

Molecular ecology resources

Avec: Phillip A Morin , Frederick I Archer , Catherine D Avila , Jennifer R Balacco , Yury V Bukhman , William Chow , Olivier Fedrigo , Giulio Formenti , Julie A Fronczek , Arkarachai Fungtammasan , Frances M D Gulland , Bettina Haase , Mads Peter Heide-Jorgensen , Marlys L Houck , Kerstin Howe , Ann C Misuraca , Jacquelyn Mountcastle , Whitney Musser , Sadye Paez , Sarah Pelan , Adam Phillippy , Arang Rhie , Jacqueline Robinson , Lorenzo Rojas-Bracho , Teri K Rowles , Oliver A Ryder , Cynthia R Smith , Sacha Stevenson , Barbara L Taylor , Jonas Teilmann , James Torrance , Randall S Wells , Andrew J Westgate , Erich D Jarvis

Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes.

Nature biotechnology

Avec: Kishwar Shafin , Trevor Pesout , Ryan Lorig-Roach , Marina Haukness , Hugh E Olsen , Colleen Bosworth , Joel Armstrong , Kristof Tigyi , Nicholas Maurer , Sergey Koren , Fritz J Sedlazeck , Tobias Marschall , Simon Mayes , Vania Costa , Justin M Zook , Kelvin J Liu , Duncan Kilburn , Melanie Sorensen , Katy M Munson , Mitchell R Vollger , Jean Monlong , Erik Garrison , Evan E Eichler , Sofie Salama , David Haussler , Richard E Green , Mark Akeson , Adam Phillippy , Karen H Miga , Paolo Carnevali , Miten Jain , Benedict Paten

A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.).

DNA research : an international journal for rapid publication of reports on genes and genomes

Avec: J Mitchell McGrath , Andrew Funk , Paul Galewski , Shujun Ou , Belinda Townsend , Karen Davenport , Hajnalka Daligault , Shannon Johnson , Joyce Lee , Alex Hastie , Aude Darracq , Glenda Willems , Steve Barnes , Ivan Liachko , Shawn Sullivan , Sergey Koren , Adam Phillippy , Jie Wang , Tiffany Liu , Jane Pulman , Kevin Childs , Shengqiang Shu , Anastasia Yocum , Damian Fermin , Effie Mutasa-Göttgens , Piergiorgio Stevanato , Kazunori Taguchi , Rachel Naegele , Kevin M Dorn

Low mutation rate in epaulette sharks is consistent with a slow rate of evolution in sharks.

Nature communications

Avec: Ashley T Sendell-Price , Frank J Tulenko , Mats Pettersson , Du Kang , Margo Montandon , Sylke Winkler , Kathleen Kulb , Gavin P Naylor , Adam Phillippy , Olivier Fedrigo , Jacquelyn Mountcastle , Jennifer R Balacco , Amalia Dutra , Rebecca E Dale , Bettina Haase , Erich D Jarvis , Gene Myers , Shawn M Burgess , Peter D Currie , Leif Andersson , Manfred Schartl

Reference genomes of channel catfish and blue catfish reveal multiple pericentric chromosome inversions.

BMC biology

Avec: Geoffrey C Waldbieser , Shikai Liu , Zihao Yuan , Caitlin E Older , Dongya Gao , Chenyu Shi , Brian G Bosworth , Ning Li , Lisui Bao , Mona A Kirby , Yulin Jin , Monica L Wood , Brian Scheffler , Sheron Simpson , Ramey C Youngblood , Mary V Duke , Linda Ballard , Adam Phillippy , Sergey Koren , Zhanjiang Liu

Réseau de co-auteurs

Sergey Koren 3 collaborations

Jennifer R Balacco 2 collaborations

Olivier Fedrigo 2 collaborations

Bettina Haase 2 collaborations

Jacquelyn Mountcastle 2 collaborations

Erich D Jarvis 2 collaborations

Phillip A Morin 1 collaboration

Frederick I Archer 1 collaboration

Catherine D Avila 1 collaboration

Yury V Bukhman 1 collaboration

William Chow 1 collaboration

Giulio Formenti 1 collaboration

Julie A Fronczek 1 collaboration

Arkarachai Fungtammasan 1 collaboration

Frances M D Gulland 1 collaboration

Mads Peter Heide-Jorgensen 1 collaboration

Marlys L Houck 1 collaboration

Kerstin Howe 1 collaboration

Ann C Misuraca 1 collaboration

Whitney Musser 1 collaboration

Sadye Paez 1 collaboration

Sarah Pelan 1 collaboration

Arang Rhie 1 collaboration

Jacqueline Robinson 1 collaboration

Lorenzo Rojas-Bracho 1 collaboration

Teri K Rowles 1 collaboration

Oliver A Ryder 1 collaboration

Cynthia R Smith 1 collaboration

Sacha Stevenson 1 collaboration

Barbara L Taylor 1 collaboration

Jonas Teilmann 1 collaboration

James Torrance 1 collaboration

Randall S Wells 1 collaboration

Andrew J Westgate 1 collaboration

Kishwar Shafin 1 collaboration

Trevor Pesout 1 collaboration

Ryan Lorig-Roach 1 collaboration

Marina Haukness 1 collaboration

Hugh E Olsen 1 collaboration

Colleen Bosworth 1 collaboration

Joel Armstrong 1 collaboration

Kristof Tigyi 1 collaboration

Nicholas Maurer 1 collaboration

Fritz J Sedlazeck 1 collaboration

Tobias Marschall 1 collaboration

Simon Mayes 1 collaboration

Vania Costa 1 collaboration

Justin M Zook 1 collaboration

Kelvin J Liu 1 collaboration

Duncan Kilburn 1 collaboration

Melanie Sorensen 1 collaboration

Katy M Munson 1 collaboration

Mitchell R Vollger 1 collaboration

Jean Monlong 1 collaboration

Erik Garrison 1 collaboration

Evan E Eichler 1 collaboration

Sofie Salama 1 collaboration

David Haussler 1 collaboration

Richard E Green 1 collaboration

Mark Akeson 1 collaboration

Karen H Miga 1 collaboration

Paolo Carnevali 1 collaboration

Miten Jain 1 collaboration

Benedict Paten 1 collaboration

J Mitchell McGrath 1 collaboration

Andrew Funk 1 collaboration

Paul Galewski 1 collaboration

Shujun Ou 1 collaboration

Belinda Townsend 1 collaboration

Karen Davenport 1 collaboration

Hajnalka Daligault 1 collaboration

Shannon Johnson 1 collaboration

Joyce Lee 1 collaboration

Alex Hastie 1 collaboration

Aude Darracq 1 collaboration

Glenda Willems 1 collaboration

Steve Barnes 1 collaboration

Ivan Liachko 1 collaboration

Shawn Sullivan 1 collaboration

Jie Wang 1 collaboration

Tiffany Liu 1 collaboration

Jane Pulman 1 collaboration

Kevin Childs 1 collaboration

Shengqiang Shu 1 collaboration

Anastasia Yocum 1 collaboration

Damian Fermin 1 collaboration

Effie Mutasa-Göttgens 1 collaboration

Piergiorgio Stevanato 1 collaboration

Kazunori Taguchi 1 collaboration

Rachel Naegele 1 collaboration

Kevin M Dorn 1 collaboration

Ashley T Sendell-Price 1 collaboration

Frank J Tulenko 1 collaboration

Mats Pettersson 1 collaboration

Du Kang 1 collaboration

Margo Montandon 1 collaboration

Sylke Winkler 1 collaboration

Kathleen Kulb 1 collaboration

Gavin P Naylor 1 collaboration

Amalia Dutra 1 collaboration

Rebecca E Dale 1 collaboration

Gene Myers 1 collaboration

Shawn M Burgess 1 collaboration

Peter D Currie 1 collaboration

Leif Andersson 1 collaboration

Manfred Schartl 1 collaboration

Geoffrey C Waldbieser 1 collaboration

Shikai Liu 1 collaboration

Zihao Yuan 1 collaboration

Caitlin E Older 1 collaboration

Dongya Gao 1 collaboration

Chenyu Shi 1 collaboration

Brian G Bosworth 1 collaboration

Ning Li 1 collaboration

Lisui Bao 1 collaboration

Mona A Kirby 1 collaboration

Yulin Jin 1 collaboration

Monica L Wood 1 collaboration

Brian Scheffler 1 collaboration

Sheron Simpson 1 collaboration

Ramey C Youngblood 1 collaboration

Mary V Duke 1 collaboration

Linda Ballard 1 collaboration

Zhanjiang Liu 1 collaboration