Erik Garrison

Affiliations

UC Santa Cruz Genomics Institute, University of California, Santa Cruz, California, USA.

Publications (10)

Preparing advanced learners for geriatric team care: A short-term curricular model that works.

Gerontology & geriatrics education

Avec: Susan L Glassburn , Glenda R Westmoreland , Kathryn I Frank , Janet S Fulton , Emilie Garrison , Sarah Roth , Na Bo , Yan Tong , Debra K Litzelman

Genotyping structural variants in pangenome graphs using the vg toolkit.

Genome biology

Avec: Glenn Hickey , David Heller , Jean Monlong , Jonas A Sibbesen , Jouni Sirén , Jordan Eizenga , Eric T Dawson , Erik Garrison , Adam M Novak , Benedict Paten

Viral coinfection analysis using a MinHash toolkit.

BMC bioinformatics

Avec: Eric T Dawson , Sarah Wagner , David Roberson , Meredith Yeager , Joseph Boland , Erik Garrison , Stephen Chanock , Mark Schiffman , Tina Raine-Bennett , Thomas Lorey , Phillip E Castle , Lisa Mirabello , Richard Durbin

Haplotype-aware graph indexes.

Bioinformatics (Oxford, England)

Avec: Jouni Sirén , Erik Garrison , Adam M Novak , Benedict Paten , Richard Durbin

One Hospital's Experience With Implementing On-Demand Annual Competencies for Nurses.

Journal for nurses in professional development

Avec: Kathy Ostrander , Elisabeth Garrison , April Caruso

GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs.

PLoS computational biology

Avec: Manuel Tognon , Vincenzo Bonnici , Erik Garrison , Rosalba Giugno , Luca Pinello

Gestational diabetes and childhood asthma in a racially diverse US pregnancy cohort.

Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology

Avec: Margaret A Adgent , Tebeb Gebretsadik , Jada Reedus , Cornelia Graves , Etoi Garrison , Nicole Bush , Robert Davis , Kaja Z LeWinn , Frances Tylavsky , Kecia N Carroll

Efficient dynamic variation graphs.

Bioinformatics (Oxford, England)

Avec: Jordan M Eizenga , Adam M Novak , Emily Kobayashi , Flavia Villani , Cecilia Cisar , Simon Heumos , Glenn Hickey , Vincenza Colonna , Benedict Paten , Erik Garrison

Removing reference bias and improving indel calling in ancient DNA data analysis by mapping to a sequence variation graph.

Genome biology

Avec: Rui Martiniano , Erik Garrison , Eppie R Jones , Andrea Manica , Richard Durbin

Unbiased pangenome graphs.

Bioinformatics (Oxford, England)

Avec: Erik Garrison , Andrea Guarracino

Réseau de co-auteurs

Adam M Novak 3 collaborations

Benedict Paten 3 collaborations

Richard Durbin 3 collaborations

Glenn Hickey 2 collaborations

Jouni Sirén 2 collaborations

Eric T Dawson 2 collaborations

Susan L Glassburn 1 collaboration

Glenda R Westmoreland 1 collaboration

Kathryn I Frank 1 collaboration

Janet S Fulton 1 collaboration

Emilie Garrison 1 collaboration

Sarah Roth 1 collaboration

Na Bo 1 collaboration

Yan Tong 1 collaboration

Debra K Litzelman 1 collaboration

David Heller 1 collaboration

Jean Monlong 1 collaboration

Jonas A Sibbesen 1 collaboration

Jordan Eizenga 1 collaboration

Sarah Wagner 1 collaboration

David Roberson 1 collaboration

Meredith Yeager 1 collaboration

Joseph Boland 1 collaboration

Stephen Chanock 1 collaboration

Mark Schiffman 1 collaboration

Tina Raine-Bennett 1 collaboration

Thomas Lorey 1 collaboration

Phillip E Castle 1 collaboration

Lisa Mirabello 1 collaboration

Kathy Ostrander 1 collaboration

Elisabeth Garrison 1 collaboration

April Caruso 1 collaboration

Manuel Tognon 1 collaboration

Vincenzo Bonnici 1 collaboration

Rosalba Giugno 1 collaboration

Luca Pinello 1 collaboration

Margaret A Adgent 1 collaboration

Tebeb Gebretsadik 1 collaboration

Jada Reedus 1 collaboration

Cornelia Graves 1 collaboration

Etoi Garrison 1 collaboration

Nicole Bush 1 collaboration

Robert Davis 1 collaboration

Kaja Z LeWinn 1 collaboration

Frances Tylavsky 1 collaboration

Kecia N Carroll 1 collaboration

Jordan M Eizenga 1 collaboration

Emily Kobayashi 1 collaboration

Flavia Villani 1 collaboration

Cecilia Cisar 1 collaboration

Simon Heumos 1 collaboration

Vincenza Colonna 1 collaboration

Rui Martiniano 1 collaboration

Eppie R Jones 1 collaboration

Andrea Manica 1 collaboration

Andrea Guarracino 1 collaboration