Rodrigo Hamede

Affiliations

School of Natural Sciences University of Tasmania Hobart Tasmania Australia.

ORCID: https://orcid.org/0000-0003-1526-225X

Publications (40)

Tracing the rise of malignant cell lines: Distribution, epidemiology and evolutionary interactions of two transmissible cancers in Tasmanian devils.

Evolutionary applications

Avec: Samantha James , Geordie Jennings , Young Mi Kwon , Maximilian Stammnitz , Alexandra Fraik , Andrew Storfer , Sebastien Comte , David Pemberton , Samantha Fox , Bill Brown , Ruth Pye , Gregory Woods , Bruce Lyons , Paul A Hohenlohe , Hamish McCallum , Hannah Siddle , Frédéric Thomas , Beata Ujvari , Elizabeth P Murchison , Menna Jones ,

The evolution of resistance and tolerance as cancer defences.

Parasitology

Avec: Frédéric Thomas , Mathieu Giraudeau , Flora Gouzerh , Justine Boutry , François Renaud , Pascal Pujol , Aurélie Tasiemski , Florence Bernex , Antonio Maraver , Emilie Bousquet , Laurent Dormont , Jens Osterkamp , Benjamin Roche , Beata Ujvari

Extreme Competence: Keystone Hosts of Infections.

Trends in ecology & evolution

Avec: Lynn B Martin , BriAnne Addison , Andrew G D Bean , Katherine L Buchanan , Ondi L Crino , Justin R Eastwood , Andrew S Flies , Geoffrey E Hill , Marcel Klaassen , Rebecca E Koch , Johanne M Martens , Constanza Napolitano , Edward J Narayan , Lee Peacock , Alison J Peel , Anne Peters , Nynke Raven , Alice Risely , Michael J Roast , Lee A Rollins , Manuel Ruiz-Aravena , Dan Selechnik , Helena S Stokes , Beata Ujvari , Laura F Grogan

Disruption of Metapopulation Structure Reduces Tasmanian Devil Facial Tumour Disease Spread at the Expense of Abundance and Genetic Diversity.

Pathogens (Basel, Switzerland)

Avec: Rowan Durrant , Konstans Wells , Miguel Lurgi

A transmissible cancer shifts from emergence to endemism in Tasmanian devils.

Science (New York, N.Y.)

Avec: Austin H Patton , Matthew F Lawrance , Mark J Margres , Christopher P Kozakiewicz , Manuel Ruiz-Aravena , David G Hamilton , Sebastien Comte , Lauren E Ricci , Robyn L Taylor , Tanja Stadler , Adam Leaché , Hamish McCallum , Menna E Jones , Paul A Hohenlohe , Andrew Storfer

Transmissible cancer and the evolution of sex.

PLoS biology

Avec: Frédéric Thomas , Thomas Madsen , Mathieu Giraudeau , Dorothée Misse , Orsolya Vincze , François Renaud , Benjamin Roche , Beata Ujvari

Spatial variation in gene expression of Tasmanian devil facial tumors despite minimal host transcriptomic response to infection.

BMC genomics

Avec: Christopher P Kozakiewicz , Alexandra K Fraik , Austin H Patton , Manuel Ruiz-Aravena , David G Hamilton , Hamish McCallum , Paul A Hohenlohe , Mark J Margres , Menna E Jones , Andrew Storfer

Season, weight, and age, but not transmissible cancer, affect tick loads in the endangered Tasmanian devil.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases

Avec: Sophia Belkhir , Frédéric Thomas , Beata Ujvari , Antoine M Dujon

Spontaneously occurring tumors in different wild-derived strains of hydra.

Scientific reports

Avec: Justine Boutry , Marie Buysse , Sophie Tissot , Chantal Cazevielle , Antoine M Dujon , Beata Ujvari , Mathieu Giraudeau , Alexander Klimovich , Frédéric Thomas , Jácint Tökölyi

The tumour is in the detail: Local phylogenetic, population and epidemiological dynamics of a transmissible cancer in Tasmanian devils.

Evolutionary applications

Avec: Nicholas M Fountain-Jones , Fernando Arce , Menna Jones , Andrew Storfer , Paul A Hohenlohe , Hamish McCallum , Benjamin Roche , Beata Ujvari , Frédéric Thomas

The spectral underpinnings of pathogen spread on animal networks.

Proceedings. Biological sciences

Avec: Nicholas M Fountain-Jones , Mathew Silk , Raima Carol Appaw , Julie Rushmore , Kimberly VanderWaal , Meggan E Craft , Scott Carver , Michael Charleston

In vitro competition between two transmissible cancers and potential implications for their host, the Tasmanian devil.

Evolutionary applications

Avec: Anne-Lise Gérard , Rachel S Owen , Antoine M Dujon , Benjamin Roche , Frédéric Thomas , Beata Ujvari , Hannah V Siddle

Cancer and One Health: tumor-bearing individuals can act as super spreaders of symbionts in communities.

Scientific reports

Avec: Sophie Tissot , Jordan Meliani , Matthew Chee , Aurora M Nedelcu , Justine Boutry , Jácint Tökölyi , Benjamin Roche , Beata Ujvari , Frédéric Thomas , Antoine M Dujon

Evolution and lineage dynamics of a transmissible cancer in Tasmanian devils.

PLoS biology

Avec: Young Mi Kwon , Kevin Gori , Naomi Park , Nicole Potts , Kate Swift , Jinhong Wang , Maximilian R Stammnitz , Naomi Cannell , Adrian Baez-Ortega , Sebastien Comte , Samantha Fox , Colette Harmsen , Stewart Huxtable , Menna Jones , Alexandre Kreiss , Clare Lawrence , Billie Lazenby , Sarah Peck , Ruth Pye , Gregory Woods , Mona Zimmermann , David C Wedge , David Pemberton , Michael R Stratton , Elizabeth P Murchison

Group phenotypic composition in cancer.

eLife

Avec: Jean-Pascal Capp , James DeGregori , Aurora M Nedelcu , Antoine M Dujon , Justine Boutry , Pascal Pujol , Catherine Alix-Panabières , Benjamin Roche , Beata Ujvari , Andriy Marusyk , Robert Gatenby , Frédéric Thomas

The ecology and evolution of wildlife cancers: Applications for management and conservation.

Evolutionary applications

Avec: Rachel Owen , Hannah Siddle , Sarah Peck , Menna Jones , Antoine M Dujon , Mathieu Giraudeau , Benjamin Roche , Beata Ujvari , Frédéric Thomas

Disease swamps molecular signatures of genetic-environmental associations to abiotic factors in Tasmanian devil (Sarcophilus harrisii) populations.

Evolution; international journal of organic evolution

Avec: Alexandra K Fraik , Mark J Margres , Brendan Epstein , Soraia Barbosa , Menna Jones , Sarah Hendricks , Barbara Schönfeld , Amanda R Stahlke , Anne Veillet , Hamish McCallum , Elisa Lopez-Contreras , Samantha J Kallinen , Paul A Hohenlohe , Joanna L Kelley , Andrew Storfer

On the need for integrating cancer into the One Health perspective.

Evolutionary applications

Avec: Antoine M Dujon , Joel S Brown , Delphine Destoumieux-Garzón , Marion Vittecoq , Aurélie Tasiemski , Justine Boutry , Sophie Tissot , Catherine Alix-Panabieres , Pascal Pujol , François Renaud , Frédéric Simard , Benjamin Roche , Beata Ujvari , Frédéric Thomas

Quantifying 25 years of disease-caused declines in Tasmanian devil populations: host density drives spatial pathogen spread.

Ecology letters

Avec: Calum X Cunningham , Sebastien Comte , Hamish McCallum , David G Hamilton , Andrew Storfer , Tracey Hollings , Manuel Ruiz-Aravena , Douglas H Kerlin , Barry W Brook , Greg Hocking , Manna E Jones

Intergenomic signatures of coevolution between Tasmanian devils and an infectious cancer.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Dylan G Gallinson , Christopher P Kozakiewicz , Rhett M Rautsaw , Marc A Beer , Manuel Ruiz-Aravena , Sebastien Comte , David G Hamilton , Douglas H Kerlin , Hamish I McCallum , Menna E Jones , Andrew Storfer , Ryan McMinds , Mark J Margres

The complex effects of modern oncogenic environments on the fitness, evolution and conservation of wildlife species.

Evolutionary applications

Avec: Antoine M Dujon , Beata Ujvari , Sophie Tissot , Jordan Meliani , Océane Rieu , Nikita Stepanskyy , Jácint Tokolyi , Aurora Nedelcu , Frédéric Thomas

Approaches and methods to study wildlife cancer.

The Journal of animal ecology

Avec: Mathieu Giraudeau , Orsolya Vincze , Sophie M Dupont , Tuul Sepp , Ciara Baines , Jean-Francois Lemaitre , Karin Lemberger , Sophie Gentès , Amy Boddy , Antoine M Dujon , Georgina Bramwell , Valerie Harris , Beata Ujvari , Catherine Alix-Panabières , Stephane Lair , David Sayag , Dalia A Conde , Fernando Colchero , Tara M Harrison , Samuel Pavard , Benjamin Padilla-Morales , Damien Chevallier , Benjamin Roche , Tamas Malkocs , Athena C Aktipis , Carlo Maley , James DeGregori , Guillaume Le Loc'h , Frédéric Thomas

Disease-driven top predator decline affects mesopredator population genomic structure.

Nature ecology & evolution

Avec: Marc A Beer , Kirstin M Proft , Anne Veillet , Christopher P Kozakiewicz , David G Hamilton , Hamish McCallum , Paul A Hohenlohe , Christopher P Burridge , Mark J Margres , Menna E Jones , Andrew Storfer

Fifth International Biannual Evolution and Ecology of Cancer Conference (Cooperation, Conflict and Parasitism) meeting report-Wellcome Genome Campus, Hinxton, UK.

Evolutionary applications

Avec: Nynke Raven , Georgina Bramwell , Frédéric Thomas , Beata Ujvari

Transmissible Cancers in an Evolutionary Perspective.

iScience

Avec: Antoine M Dujon , Robert A Gatenby , Georgina Bramwell , Nick MacDonald , Erin Dohrmann , Nynke Raven , Aaron Schultz , Anne-Lise Gérard , Mathieu Giraudeau , Frédéric Thomas , Beata Ujvari

Telomere Length is a Susceptibility Marker for Tasmanian Devil Facial Tumor Disease.

EcoHealth

Avec: Lane E Smith , Menna E Jones , Rosana Risques , Austin H Patton , Patrick A Carter , Andrew Storfer

Contemporary and historical selection in Tasmanian devils (

Proceedings. Biological sciences

Avec: Amanda R Stahlke , Brendan Epstein , Soraia Barbosa , Mark J Margres , Austin H Patton , Sarah A Hendricks , Anne Veillet , Alexandra K Fraik , Barbara Schönfeld , Hamish I McCallum , Menna E Jones , Andrew Storfer , Paul A Hohenlohe

Changes in spatial organization following an acute epizootic: Tasmanian devils and their transmissible cancer.

Global ecology and conservation

Avec: Sebastien Comte , Scott Carver , Menna Jones

The evolution of two transmissible cancers in Tasmanian devils.

Science (New York, N.Y.)

Avec: Maximilian R Stammnitz , Kevin Gori , Young Mi Kwon , Edward Harry , Fergal J Martin , Konstantinos Billis , Yuanyuan Cheng , Adrian Baez-Ortega , William Chow , Sebastien Comte , Hannes Eggertsson , Samantha Fox , Menna Jones , Billie Lazenby , Sarah Peck , Ruth Pye , Michael A Quail , Kate Swift , Jinhong Wang , Jonathan Wood , Kerstin Howe , Michael R Stratton , Zemin Ning , Elizabeth P Murchison

Tumors alter life history traits in the freshwater cnidarian,

iScience

Avec: Justine Boutry , Sophie Tissot , Narimène Mekaoui , Antoine Dujon , Jordan Meliani , Beata Ujvari , Benjamin Roche , Aurora M Nedelcu , Jácint Tokolyi , Frédéric Thomas

Spontaneous Tumor Regression in Tasmanian Devils Associated with

Genetics

Avec: Mark J Margres , Manuel Ruiz-Aravena , Kusum Chawla , Austin H Patton , Matthew F Lawrance , Alexandra K Fraik , Amanda R Stahlke , Brian W Davis , Elaine A Ostrander , Menna E Jones , Hamish McCallum , Patrick J Paddison , Paul A Hohenlohe , David Hockenbery , Andrew Storfer

Comparative landscape genetics reveals differential effects of environment on host and pathogen genetic structure in Tasmanian devils (Sarcophilus harrisii) and their transmissible tumour.

Molecular ecology

Avec: Christopher P Kozakiewicz , Lauren Ricci , Austin H Patton , Amanda R Stahlke , Sarah A Hendricks , Mark J Margres , Manuel Ruiz-Aravena , David G Hamilton , Hamish McCallum , Menna E Jones , Paul A Hohenlohe , Andrew Storfer

Transcriptomics of Tasmanian Devil (

Genes

Avec: Alexandra K Fraik , Corey Quackenbush , Mark J Margres , Sebastien Comte , David G Hamilton , Christopher P Kozakiewicz , Menna Jones , Paul A Hohenlohe , Andrew Storfer , Joanna L Kelley

Ecological and Evolutionary Consequences of Anticancer Adaptations.

iScience

Avec: Justine Boutry , Antoine M Dujon , Anne-Lise Gerard , Sophie Tissot , Nick Macdonald , Aaron Schultz , Peter A Biro , Christa Beckmann , David G Hamilton , Mathieu Giraudeau , Beata Ujvari , Frédéric Thomas

Cathelicidin-3 Associated With Serum Extracellular Vesicles Enables Early Diagnosis of a Transmissible Cancer.

Frontiers in immunology

Avec: Camila Espejo , Richard Wilson , Ruth J Pye , Julian C Ratcliffe , Manuel Ruiz-Aravena , Eduard Willms , Barrett W Wolfe , Andrew F Hill , Menna E Jones , Gregory M Woods , A Bruce Lyons

Expression of the Nonclassical MHC Class I, Saha-UD in the Transmissible Cancer Devil Facial Tumour Disease (DFTD).

Pathogens (Basel, Switzerland)

Avec: Kathryn Hussey , Alison Caldwell , Alexandre Kreiss , Karsten Skjødt , Annalisa Gastaldello , Ruth Pye , Gregory M Woods , Hannah V Siddle

Transmissible Cancer Evolution: The Under-Estimated Role of Environmental Factors in the "Perfect Storm" Theory.

Pathogens (Basel, Switzerland)

Avec: Sophie Tissot , Anne-Lise Gérard , Justine Boutry , Antoine M Dujon , Tracey Russel , Hannah Siddle , Aurélie Tasiemski , Jordan Meliani , Benjamin Roche , Beata Ujvari , Frédéric Thomas

Transmissible cancer and longitudinal telomere dynamics in Tasmanian devils (Sarcophilus harrisii).

Molecular ecology

Avec: Thomas Madsen , Marcel Klaassen , Nynke Raven , Antoine M Dujon , Geordie Jennings , Frédéric Thomas , Beata Ujvari

The impact of food availability on tumorigenesis is evolutionarily conserved.

Scientific reports

Avec: Sophie Tissot , Lena Guimard , Jordan Meliani , Justine Boutry , Antoine M Dujon , Jean-Pascal Capp , Jácint Tökölyi , Peter A Biro , Christa Beckmann , Laura Fontenille , Nam Do Khoa , Benjamin Roche , Beata Ujvari , Aurora M Nedelcu , Frédéric Thomas

Effects of a transmissible cancer on life-history traits in Tasmanian devils.

bioRxiv : the preprint server for biology

Avec: Kasha Strickland , Menna Jones , Shelly Lachish , Sebastien Comte , Paul Hohenlohe , Hamish McCallum , Andrew Storfer , Loeske Kruuk

Réseau de co-auteurs

Beata Ujvari 21 collaborations

Frédéric Thomas 20 collaborations

Andrew Storfer 14 collaborations

Antoine M Dujon 14 collaborations

Benjamin Roche 12 collaborations

Paul A Hohenlohe 10 collaborations

Hamish McCallum 10 collaborations

Sebastien Comte 9 collaborations

Menna Jones 9 collaborations

Justine Boutry 9 collaborations

Mark J Margres 9 collaborations

Menna E Jones 9 collaborations

Manuel Ruiz-Aravena 8 collaborations

David G Hamilton 8 collaborations

Sophie Tissot 8 collaborations

Mathieu Giraudeau 7 collaborations

Austin H Patton 6 collaborations

Christopher P Kozakiewicz 6 collaborations

Alexandra K Fraik 5 collaborations

Jordan Meliani 5 collaborations

Ruth Pye 4 collaborations

Nynke Raven 4 collaborations

Aurora M Nedelcu 4 collaborations

Amanda R Stahlke 4 collaborations

Young Mi Kwon 3 collaborations

Samantha Fox 3 collaborations

Hannah Siddle 3 collaborations

Elizabeth P Murchison 3 collaborations

François Renaud 3 collaborations

Pascal Pujol 3 collaborations

Aurélie Tasiemski 3 collaborations

Jácint Tökölyi 3 collaborations

Anne-Lise Gérard 3 collaborations

Sarah Peck 3 collaborations

Anne Veillet 3 collaborations

Georgina Bramwell 3 collaborations

Geordie Jennings 2 collaborations

David Pemberton 2 collaborations

Gregory Woods 2 collaborations

Marcel Klaassen 2 collaborations

Matthew F Lawrance 2 collaborations

Thomas Madsen 2 collaborations

Orsolya Vincze 2 collaborations

Nicholas M Fountain-Jones 2 collaborations

Scott Carver 2 collaborations

Hannah V Siddle 2 collaborations

Kevin Gori 2 collaborations

Kate Swift 2 collaborations

Jinhong Wang 2 collaborations

Maximilian R Stammnitz 2 collaborations

Adrian Baez-Ortega 2 collaborations

Alexandre Kreiss 2 collaborations

Billie Lazenby 2 collaborations

Michael R Stratton 2 collaborations

Jean-Pascal Capp 2 collaborations

James DeGregori 2 collaborations

Catherine Alix-Panabières 2 collaborations

Brendan Epstein 2 collaborations

Soraia Barbosa 2 collaborations

Barbara Schönfeld 2 collaborations

Joanna L Kelley 2 collaborations

Douglas H Kerlin 2 collaborations

Marc A Beer 2 collaborations

Hamish I McCallum 2 collaborations

Jácint Tokolyi 2 collaborations

Aaron Schultz 2 collaborations

Sarah A Hendricks 2 collaborations

Peter A Biro 2 collaborations

Christa Beckmann 2 collaborations

Gregory M Woods 2 collaborations

Samantha James 1 collaboration

Maximilian Stammnitz 1 collaboration

Alexandra Fraik 1 collaboration

Bill Brown 1 collaboration

Bruce Lyons 1 collaboration

Flora Gouzerh 1 collaboration

Florence Bernex 1 collaboration

Antonio Maraver 1 collaboration

Emilie Bousquet 1 collaboration

Laurent Dormont 1 collaboration

Jens Osterkamp 1 collaboration

Lynn B Martin 1 collaboration

BriAnne Addison 1 collaboration

Andrew G D Bean 1 collaboration

Katherine L Buchanan 1 collaboration

Ondi L Crino 1 collaboration

Justin R Eastwood 1 collaboration

Andrew S Flies 1 collaboration

Geoffrey E Hill 1 collaboration

Rebecca E Koch 1 collaboration

Johanne M Martens 1 collaboration

Constanza Napolitano 1 collaboration

Edward J Narayan 1 collaboration

Lee Peacock 1 collaboration

Alison J Peel 1 collaboration

Anne Peters 1 collaboration

Alice Risely 1 collaboration

Michael J Roast 1 collaboration

Lee A Rollins 1 collaboration

Dan Selechnik 1 collaboration

Helena S Stokes 1 collaboration

Laura F Grogan 1 collaboration

Rowan Durrant 1 collaboration

Konstans Wells 1 collaboration

Miguel Lurgi 1 collaboration

Lauren E Ricci 1 collaboration

Robyn L Taylor 1 collaboration

Tanja Stadler 1 collaboration

Adam Leaché 1 collaboration

Dorothée Misse 1 collaboration

Sophia Belkhir 1 collaboration

Marie Buysse 1 collaboration

Chantal Cazevielle 1 collaboration

Alexander Klimovich 1 collaboration

Fernando Arce 1 collaboration

Mathew Silk 1 collaboration

Raima Carol Appaw 1 collaboration

Julie Rushmore 1 collaboration

Kimberly VanderWaal 1 collaboration

Meggan E Craft 1 collaboration

Michael Charleston 1 collaboration

Rachel S Owen 1 collaboration

Matthew Chee 1 collaboration

Naomi Park 1 collaboration

Nicole Potts 1 collaboration

Naomi Cannell 1 collaboration

Colette Harmsen 1 collaboration

Stewart Huxtable 1 collaboration

Clare Lawrence 1 collaboration

Mona Zimmermann 1 collaboration

David C Wedge 1 collaboration

Andriy Marusyk 1 collaboration

Robert Gatenby 1 collaboration

Rachel Owen 1 collaboration

Sarah Hendricks 1 collaboration

Elisa Lopez-Contreras 1 collaboration

Samantha J Kallinen 1 collaboration

Joel S Brown 1 collaboration

Delphine Destoumieux-Garzón 1 collaboration

Marion Vittecoq 1 collaboration

Catherine Alix-Panabieres 1 collaboration

Frédéric Simard 1 collaboration

Calum X Cunningham 1 collaboration

Tracey Hollings 1 collaboration

Barry W Brook 1 collaboration

Greg Hocking 1 collaboration

Manna E Jones 1 collaboration

Dylan G Gallinson 1 collaboration

Rhett M Rautsaw 1 collaboration

Ryan McMinds 1 collaboration

Océane Rieu 1 collaboration

Nikita Stepanskyy 1 collaboration

Aurora Nedelcu 1 collaboration

Sophie M Dupont 1 collaboration

Tuul Sepp 1 collaboration

Ciara Baines 1 collaboration

Jean-Francois Lemaitre 1 collaboration

Karin Lemberger 1 collaboration

Sophie Gentès 1 collaboration

Amy Boddy 1 collaboration

Valerie Harris 1 collaboration

Stephane Lair 1 collaboration

David Sayag 1 collaboration

Dalia A Conde 1 collaboration

Fernando Colchero 1 collaboration

Tara M Harrison 1 collaboration

Samuel Pavard 1 collaboration

Benjamin Padilla-Morales 1 collaboration

Damien Chevallier 1 collaboration

Tamas Malkocs 1 collaboration

Athena C Aktipis 1 collaboration

Carlo Maley 1 collaboration

Guillaume Le Loc'h 1 collaboration

Kirstin M Proft 1 collaboration

Christopher P Burridge 1 collaboration

Robert A Gatenby 1 collaboration

Nick MacDonald 1 collaboration

Erin Dohrmann 1 collaboration

Lane E Smith 1 collaboration

Rosana Risques 1 collaboration

Patrick A Carter 1 collaboration

Edward Harry 1 collaboration

Fergal J Martin 1 collaboration

Konstantinos Billis 1 collaboration

Yuanyuan Cheng 1 collaboration

William Chow 1 collaboration

Hannes Eggertsson 1 collaboration

Michael A Quail 1 collaboration

Jonathan Wood 1 collaboration

Kerstin Howe 1 collaboration

Zemin Ning 1 collaboration

Narimène Mekaoui 1 collaboration

Antoine Dujon 1 collaboration

Kusum Chawla 1 collaboration

Brian W Davis 1 collaboration

Elaine A Ostrander 1 collaboration

Patrick J Paddison 1 collaboration

David Hockenbery 1 collaboration

Lauren Ricci 1 collaboration

Corey Quackenbush 1 collaboration

Anne-Lise Gerard 1 collaboration

Nick Macdonald 1 collaboration

Camila Espejo 1 collaboration

Richard Wilson 1 collaboration

Ruth J Pye 1 collaboration

Julian C Ratcliffe 1 collaboration

Eduard Willms 1 collaboration

Barrett W Wolfe 1 collaboration

Andrew F Hill 1 collaboration

A Bruce Lyons 1 collaboration

Kathryn Hussey 1 collaboration

Alison Caldwell 1 collaboration

Karsten Skjødt 1 collaboration

Annalisa Gastaldello 1 collaboration

Tracey Russel 1 collaboration

Lena Guimard 1 collaboration

Laura Fontenille 1 collaboration

Nam Do Khoa 1 collaboration

Kasha Strickland 1 collaboration

Shelly Lachish 1 collaboration

Paul Hohenlohe 1 collaboration

Loeske Kruuk 1 collaboration