Laure Apothéloz-Perret-Gentil

Affiliations

University of Geneva, Department of Genetics and Evolution, 1211 Geneva, Switzerland.

Publications (14)

Embracing Environmental Genomics and Machine Learning for Routine Biomonitoring.

Trends in microbiology

Avec: Tristan Cordier , Anders Lanzén , Thorsten Stoeck , Jan Pawlowski

Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap.

Molecular ecology

Avec: Tristan Cordier , Laura Alonso-Sáez , Eva Aylagas , David A Bohan , Agnès Bouchez , Anthony Chariton , Simon Creer , Larissa Frühe , François Keck , Nigel Keeley , Olivier Laroche , Florian Leese , Xavier Pochon , Thorsten Stoeck , Jan Pawlowski , Anders Lanzén

Benthic monitoring of oil and gas offshore platforms in the North Sea using environmental DNA metabarcoding.

Molecular ecology

Avec: Florian Mauffrey , Tristan Cordier , Kristina Cermakova , Thomas Merzi , Matthieu Delefosse , Philippe Blanc , Jan Pawlowski

Benthic foraminiferal metabarcoding and morphology-based assessment around three offshore gas platforms: Congruence and complementarity.

Environment international

Avec: Fabrizio Frontalini , Tristan Cordier , Eszter Balassi , Eric Armynot du Chatelet , Kristina Cermakova , Maria Virginia Alves Martins , Carla Bucci , Enrico Scantamburlo , Mauro Treglia , Vladimiro Bonamin , Jan Pawlowski

Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods.

The Science of the total environment

Avec: J Pawlowski , K Bruce , K Panksep , F I Aguirre , S Amalfitano , L Apothéloz-Perret-Gentil , T Baussant , A Bouchez , L Carugati , K Cermakova , T Cordier , C Corinaldesi , F O Costa , R Danovaro , A Dell'Anno , S Duarte , U Eisendle , B J D Ferrari , F Frontalini , L Frühe , A Haegerbaeumer , V Kisand , A Krolicka , A Lanzén , F Leese , F Lejzerowicz , E Lyautey , I Maček , M Sagova-Marečková , J K Pearman , X Pochon , T Stoeck , R Vivien , A Weigand , S Fazi

Broad sampling of monothalamids (Rhizaria, Foraminifera) gives further insight into diversity of non-marine Foraminifera.

European journal of protistology

Avec: Ferry Siemensma , Maria Holzmann , Steffen Clauß , Eckhard Voelcker , Wolfgang Bettighofer , Samira Khanipour Roshan , Susanne Walden , Kenneth Dumack , Jan Pawlowski

The Foreign Oligochaete Species

Biology

Avec: Régis Vivien , Michel Lafont , Brigitte Lods-Crozet , Maria Holzmann , Yaniss Guigoz , Benoit J D Ferrari

Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index.

Molecular ecology

Avec: Agnès Bouchez , Tristan Cordier , Arielle Cordonier , Julie Guéguen , Frederic Rimet , Valentin Vasselon , Jan Pawlowski

Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring.

Molecular ecology

Avec: Jan Pawlowski , Florian Altermatt

Multi-marker eDNA metabarcoding survey to assess the environmental impact of three offshore gas platforms in the North Adriatic Sea (Italy).

Marine environmental research

Avec: Tristan Cordier , Fabrizio Frontalini , Kristina Cermakova , Mauro Treglia , Enrico Scantamburlo , Vladimiro Bonamin , Jan Pawlowski

Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization.

The Science of the total environment

Avec: Bonnie Bailet , Ana Baričević , Teofana Chonova , Alain Franc , Jean-Marc Frigerio , Martyn Kelly , Demetrio Mora , Martin Pfannkuchen , Sebastian Proft , Mathieu Ramon , Valentin Vasselon , Jonas Zimmermann , Maria Kahlert

High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes.

Scientific reports

Avec: Régis Vivien , Jan Pawlowski , Inge Werner , Michel Lafont , Benoit J D Ferrari

Monitoring newt communities in urban area using eDNA metabarcoding.

PeerJ

Avec: Léo Charvoz , Emanuela Reo , Jacques Thiébaud , Jan Pawlowski

Assessing the potential of nematode metabarcoding for benthic monitoring of offshore oil platforms.

The Science of the total environment

Avec: J Pawlowski , K Cermakova , T Cordier , F Frontalini , L Apothéloz-Perret-Gentil , T Merzi

Réseau de co-auteurs

Jan Pawlowski 10 collaborations

Tristan Cordier 6 collaborations

Kristina Cermakova 3 collaborations

Anders Lanzén 2 collaborations

Thorsten Stoeck 2 collaborations

Agnès Bouchez 2 collaborations

Fabrizio Frontalini 2 collaborations

Enrico Scantamburlo 2 collaborations

Mauro Treglia 2 collaborations

Vladimiro Bonamin 2 collaborations

J Pawlowski 2 collaborations

L Apothéloz-Perret-Gentil 2 collaborations

K Cermakova 2 collaborations

T Cordier 2 collaborations

F Frontalini 2 collaborations

Maria Holzmann 2 collaborations

Régis Vivien 2 collaborations

Michel Lafont 2 collaborations

Benoit J D Ferrari 2 collaborations

Valentin Vasselon 2 collaborations

Laura Alonso-Sáez 1 collaboration

Eva Aylagas 1 collaboration

David A Bohan 1 collaboration

Anthony Chariton 1 collaboration

Simon Creer 1 collaboration

Larissa Frühe 1 collaboration

François Keck 1 collaboration

Nigel Keeley 1 collaboration

Olivier Laroche 1 collaboration

Florian Leese 1 collaboration

Xavier Pochon 1 collaboration

Florian Mauffrey 1 collaboration

Thomas Merzi 1 collaboration

Matthieu Delefosse 1 collaboration

Philippe Blanc 1 collaboration

Eszter Balassi 1 collaboration

Eric Armynot du Chatelet 1 collaboration

Maria Virginia Alves Martins 1 collaboration

Carla Bucci 1 collaboration

K Bruce 1 collaboration

K Panksep 1 collaboration

F I Aguirre 1 collaboration

S Amalfitano 1 collaboration

T Baussant 1 collaboration

A Bouchez 1 collaboration

L Carugati 1 collaboration

C Corinaldesi 1 collaboration

F O Costa 1 collaboration

R Danovaro 1 collaboration

A Dell'Anno 1 collaboration

S Duarte 1 collaboration

U Eisendle 1 collaboration

B J D Ferrari 1 collaboration

L Frühe 1 collaboration

A Haegerbaeumer 1 collaboration

V Kisand 1 collaboration

A Krolicka 1 collaboration

A Lanzén 1 collaboration

F Leese 1 collaboration

F Lejzerowicz 1 collaboration

E Lyautey 1 collaboration

I Maček 1 collaboration

M Sagova-Marečková 1 collaboration

J K Pearman 1 collaboration

X Pochon 1 collaboration

T Stoeck 1 collaboration

R Vivien 1 collaboration

A Weigand 1 collaboration

S Fazi 1 collaboration

Ferry Siemensma 1 collaboration

Steffen Clauß 1 collaboration

Eckhard Voelcker 1 collaboration

Wolfgang Bettighofer 1 collaboration

Samira Khanipour Roshan 1 collaboration

Susanne Walden 1 collaboration

Kenneth Dumack 1 collaboration

Brigitte Lods-Crozet 1 collaboration

Yaniss Guigoz 1 collaboration

Arielle Cordonier 1 collaboration

Julie Guéguen 1 collaboration

Frederic Rimet 1 collaboration

Florian Altermatt 1 collaboration

Bonnie Bailet 1 collaboration

Ana Baričević 1 collaboration

Teofana Chonova 1 collaboration

Alain Franc 1 collaboration

Jean-Marc Frigerio 1 collaboration

Martyn Kelly 1 collaboration

Demetrio Mora 1 collaboration

Martin Pfannkuchen 1 collaboration

Sebastian Proft 1 collaboration

Mathieu Ramon 1 collaboration

Jonas Zimmermann 1 collaboration

Maria Kahlert 1 collaboration

Inge Werner 1 collaboration

Léo Charvoz 1 collaboration

Emanuela Reo 1 collaboration

Jacques Thiébaud 1 collaboration

T Merzi 1 collaboration