Balca R Mardin

Affiliations

BioMed X Institute (GmbH), Heidelberg, Germany.

Publications (10)

Exploiting the metabolic dependencies of the broad amino acid transporter SLC6A14.

Oncotarget

Avec: Francesca R Dejure , Joachim Butzer , Ralph K Lindemann ,

Uncovering cancer vulnerabilities by machine learning prediction of synthetic lethality.

Molecular cancer

Avec: Salvatore Benfatto , Özdemirhan Serçin , Francesca R Dejure , Amir Abdollahi , Frank T Zenke ,

A solid-phase transfection platform for arrayed CRISPR screens.

Molecular systems biology

Avec: Özdemirhan Serçin , Sabine Reither , Paris Roidos , Nadja Ballin , Spyridon Palikyras , Anna Baginska , Katrin Rein , Maria Llamazares , Aliaksandr Halavatyi , Hauke Winter , Thomas Muley , Renata Z Jurkowska , Amir Abdollahi , Frank T Zenke , Beate Neumann ,

Single-cell analysis of structural variations and complex rearrangements with tri-channel processing.

Nature biotechnology

Avec: Ashley D Sanders , Sascha Meiers , Maryam Ghareghani , David Porubsky , Hyobin Jeong , M Alexandra C C van Vliet , Tobias Rausch , Paulina Richter-Pechańska , Joachim B Kunz , Silvia Jenni , Davide Bolognini , Gabriel M C Longo , Benjamin Raeder , Venla Kinanen , Jürgen Zimmermann , Vladimir Benes , Martin Schrappe , Andreas E Kulozik , Beat Bornhauser , Jean-Pierre Bourquin , Tobias Marschall , Jan O Korbel

A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice.

Nature communications

Avec: Paris Roidos , Stephanie Sungalee , Salvatore Benfatto , Özdemirhan Serçin , Adrian M Stütz , Amir Abdollahi , Jan Mauer , Frank T Zenke , Jan O Korbel ,

Genome-wide Screens Implicate Loss of Cullin Ring Ligase 3 in Persistent Proliferation and Genome Instability in TP53-Deficient Cells.

Cell reports

Avec: Alexandros P Drainas , Ruxandra A Lambuta , Irina Ivanova , Özdemirhan Serçin , Ioannis Sarropoulos , Mike L Smith , Theocharis Efthymiopoulos , Benjamin Raeder , Adrian M Stütz , Sebastian M Waszak , Jan O Korbel

Systems approaches identify the consequences of monosomy in somatic human cells.

Nature communications

Avec: Narendra Kumar Chunduri , Paul Menges , Xiaoxiao Zhang , Angela Wieland , Vincent Leon Gotsmann , Christopher Buccitelli , Jan O Korbel , Felix Willmund , Maik Kschischo , Markus Raeschle , Zuzana Storchova

Somatic structural variant formation is guided by and influences genome architecture.

Genome research

Avec: Nikos Sidiropoulos , F Germán Rodríguez-González , Ivan D Bochkov , Shilpa Garg , Adrian M Stütz , Jan O Korbel , Erez Lieberman Aiden , Joachim Weischenfeldt

The interplay of DNA repair context with target sequence predictably biasses Cas9-generated mutations.

bioRxiv : the preprint server for biology

Avec: Ananth Pallaseni , Elin Madli Peets , Gareth Girling , Luca Crepaldi , Ivan Kuzmin , Uku Raudvere , Hedi Peterson , Özdemirhan Serçin , Michael Kosicki , Leopold Parts

High-resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD.

The EMBO journal

Avec: Uwe Schwartz , Maria Llamazares Prada , Stephanie T Pohl , Mandy Richter , Raluca Tamas , Michael Schuler , Corinna Keller , Vedrana Mijosek , Thomas Muley , Marc A Schneider , Karsten Quast , Joschka Hey , Claus P Heußel , Arne Warth , Hauke Winter , Özdemirhan Serçin , Harry Karmouty-Quintana , Soma Sk Jyothula , Manish K Patel , Felix Herth , Ina Koch , Giuseppe Petrosino , Alexandru Titimeaua , Dieter Weichenhan , Tomasz P Jurkowski , Charles D Imbusch , Benedikt Brors , Vladimir Benes , Birgit Jung , David Wyatt , Heiko F Stahl , Christoph Plass , Renata Z Jurkowska

Réseau de co-auteurs

Özdemirhan Serçin 6 collaborations

Jan O Korbel 5 collaborations

Amir Abdollahi 3 collaborations

Frank T Zenke 3 collaborations

Adrian M Stütz 3 collaborations

Francesca R Dejure 2 collaborations

Salvatore Benfatto 2 collaborations

Paris Roidos 2 collaborations

Hauke Winter 2 collaborations

Thomas Muley 2 collaborations

Renata Z Jurkowska 2 collaborations

Benjamin Raeder 2 collaborations

Vladimir Benes 2 collaborations

Joachim Butzer 1 collaboration

Ralph K Lindemann 1 collaboration

Sabine Reither 1 collaboration

Nadja Ballin 1 collaboration

Spyridon Palikyras 1 collaboration

Anna Baginska 1 collaboration

Katrin Rein 1 collaboration

Maria Llamazares 1 collaboration

Aliaksandr Halavatyi 1 collaboration

Beate Neumann 1 collaboration

Ashley D Sanders 1 collaboration

Sascha Meiers 1 collaboration

Maryam Ghareghani 1 collaboration

David Porubsky 1 collaboration

Hyobin Jeong 1 collaboration

M Alexandra C C van Vliet 1 collaboration

Tobias Rausch 1 collaboration

Paulina Richter-Pechańska 1 collaboration

Joachim B Kunz 1 collaboration

Silvia Jenni 1 collaboration

Davide Bolognini 1 collaboration

Gabriel M C Longo 1 collaboration

Venla Kinanen 1 collaboration

Jürgen Zimmermann 1 collaboration

Martin Schrappe 1 collaboration

Andreas E Kulozik 1 collaboration

Beat Bornhauser 1 collaboration

Jean-Pierre Bourquin 1 collaboration

Tobias Marschall 1 collaboration

Stephanie Sungalee 1 collaboration

Jan Mauer 1 collaboration

Alexandros P Drainas 1 collaboration

Ruxandra A Lambuta 1 collaboration

Irina Ivanova 1 collaboration

Ioannis Sarropoulos 1 collaboration

Mike L Smith 1 collaboration

Theocharis Efthymiopoulos 1 collaboration

Sebastian M Waszak 1 collaboration

Narendra Kumar Chunduri 1 collaboration

Paul Menges 1 collaboration

Xiaoxiao Zhang 1 collaboration

Angela Wieland 1 collaboration

Vincent Leon Gotsmann 1 collaboration

Christopher Buccitelli 1 collaboration

Felix Willmund 1 collaboration

Maik Kschischo 1 collaboration

Markus Raeschle 1 collaboration

Zuzana Storchova 1 collaboration

Nikos Sidiropoulos 1 collaboration

F Germán Rodríguez-González 1 collaboration

Ivan D Bochkov 1 collaboration

Shilpa Garg 1 collaboration

Erez Lieberman Aiden 1 collaboration

Joachim Weischenfeldt 1 collaboration

Ananth Pallaseni 1 collaboration

Elin Madli Peets 1 collaboration

Gareth Girling 1 collaboration

Luca Crepaldi 1 collaboration

Ivan Kuzmin 1 collaboration

Uku Raudvere 1 collaboration

Hedi Peterson 1 collaboration

Michael Kosicki 1 collaboration

Leopold Parts 1 collaboration

Uwe Schwartz 1 collaboration

Maria Llamazares Prada 1 collaboration

Stephanie T Pohl 1 collaboration

Mandy Richter 1 collaboration

Raluca Tamas 1 collaboration

Michael Schuler 1 collaboration

Corinna Keller 1 collaboration

Vedrana Mijosek 1 collaboration

Marc A Schneider 1 collaboration

Karsten Quast 1 collaboration

Joschka Hey 1 collaboration

Claus P Heußel 1 collaboration

Arne Warth 1 collaboration

Harry Karmouty-Quintana 1 collaboration

Soma Sk Jyothula 1 collaboration

Manish K Patel 1 collaboration

Felix Herth 1 collaboration

Ina Koch 1 collaboration

Giuseppe Petrosino 1 collaboration

Alexandru Titimeaua 1 collaboration

Dieter Weichenhan 1 collaboration

Tomasz P Jurkowski 1 collaboration

Charles D Imbusch 1 collaboration

Benedikt Brors 1 collaboration

Birgit Jung 1 collaboration

David Wyatt 1 collaboration

Heiko F Stahl 1 collaboration

Christoph Plass 1 collaboration