Deep learning for large scale MRI-based morphological phenotyping of osteoarthritis.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
25 05 2021
Historique:
received: 25 11 2020
accepted: 07 05 2021
entrez: 26 5 2021
pubmed: 27 5 2021
medline: 4 11 2021
Statut: epublish

Résumé

Osteoarthritis (OA) develops through heterogenous pathophysiologic pathways. As a result, no regulatory agency approved disease modifying OA drugs are available to date. Stratifying knees into MRI-based morphological phenotypes may provide insight into predicting future OA incidence, leading to improved inclusion criteria and efficacy of therapeutics. We trained convolutional neural networks to classify bone, meniscus/cartilage, inflammatory, and hypertrophy phenotypes in knee MRIs from participants in the Osteoarthritis Initiative (n = 4791). We investigated cross-sectional association between baseline morphological phenotypes and baseline structural OA (Kellgren Lawrence grade > 1) and symptomatic OA. Among participants without baseline OA, we evaluated association of baseline phenotypes with 48-month incidence of structural OA and symptomatic OA. The area under the curve of bone, meniscus/cartilage, inflammatory, and hypertrophy phenotype neural network classifiers was 0.89 ± 0.01, 0.93 ± 0.03, 0.96 ± 0.02, and 0.93 ± 0.02, respectively (mean ± standard deviation). Among those with no baseline OA, bone phenotype (OR: 2.99 (95%CI: 1.59-5.62)) and hypertrophy phenotype (OR: 5.80 (95%CI: 1.82-18.5)) each respectively increased odds of developing incident structural OA and symptomatic OA at 48 months. All phenotypes except meniscus/cartilage increased odds of undergoing total knee replacement within 96 months. Artificial intelligence can rapidly stratify knees into structural phenotypes associated with incident OA and total knee replacement, which may aid in stratifying patients for clinical trials of targeted therapeutics.

Identifiants

pubmed: 34035386
doi: 10.1038/s41598-021-90292-6
pii: 10.1038/s41598-021-90292-6
pmc: PMC8149826
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

10915

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Auteurs

Nikan K Namiri (NK)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Jinhee Lee (J)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Bruno Astuto (B)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Felix Liu (F)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Rutwik Shah (R)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Sharmila Majumdar (S)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA.

Valentina Pedoia (V)

Department of Radiology and Biomedical Imaging and Center for Intelligent Imaging, University of California, San Francisco, 1700 Fourth St, Suite 201, QB3 Building, San Francisco, CA, 94107, USA. valentina.pedoia@ucsf.edu.

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