Using DNA-based stable isotope probing to reveal novel propionate- and acetate-oxidizing bacteria in propionate-fed mesophilic anaerobic chemostats.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
22 11 2019
Historique:
received: 29 07 2019
accepted: 06 11 2019
entrez: 24 11 2019
pubmed: 24 11 2019
medline: 1 12 2020
Statut: epublish

Résumé

Propionate is one of the most important intermediates of anaerobic fermentation. Its oxidation performed by syntrophic propionate-oxidizing bacteria coupled with hydrogenotrophic methanogens is considered to be a rate-limiting step for methane production. However, the current understanding of SPOB is limited due to the difficulty of pure culture isolation. In the present study, two anaerobic chemostats fed with propionate as the sole carbon source were operated at different dilution rates (0.05 d

Identifiants

pubmed: 31758023
doi: 10.1038/s41598-019-53849-0
pii: 10.1038/s41598-019-53849-0
pmc: PMC6874663
doi:

Substances chimiques

Acetates 0
DNA Probes 0
Propionates 0
RNA, Ribosomal, 16S 0
DNA 9007-49-2

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

17396

Références

Microb Ecol. 2020 Feb;79(2):285-298
pubmed: 31263981
Appl Environ Microbiol. 2000 Dec;66(12):5488-91
pubmed: 11097934
Extremophiles. 2016 Nov;20(6):895-901
pubmed: 27734192
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
pubmed: 17586664
Int J Syst Evol Microbiol. 2006 Jul;56(Pt 7):1539-1545
pubmed: 16825627
Water Res. 2019 Mar 15;151:271-279
pubmed: 30612083
Appl Microbiol Biotechnol. 2006 Sep;72(2):401-15
pubmed: 16496142
ISME J. 2016 Oct;10(10):2405-18
pubmed: 27128991
Environ Microbiol Rep. 2019 Aug;11(4):558-570
pubmed: 30985964
Water Environ Res. 2006 May;78(5):486-96
pubmed: 16752610
Int J Syst Bacteriol. 1998 Oct;48 Pt 4:1383-7
pubmed: 9828440
Appl Environ Microbiol. 2000 Nov;66(11):5066-72
pubmed: 11055964
Int J Syst Evol Microbiol. 2003 Nov;53(Pt 6):1791-9
pubmed: 14657106
Int J Syst Evol Microbiol. 2006 Sep;56(Pt 9):2089-2093
pubmed: 16957104
Bioresour Technol. 2012 Mar;107:135-43
pubmed: 22257856
Int J Syst Evol Microbiol. 2005 Jan;55(Pt 1):245-250
pubmed: 15653882
J Biosci Bioeng. 2006 Dec;102(6):535-44
pubmed: 17270719
Microbiologyopen. 2016 Dec;5(6):1027-1037
pubmed: 27364538
FEMS Microbiol Ecol. 2011 Aug;77(2):264-73
pubmed: 21470253
Int J Syst Evol Microbiol. 2007 Jul;57(Pt 7):1487-1492
pubmed: 17625181
Appl Environ Microbiol. 2012 Jul;78(14):4923-32
pubmed: 22582054
PLoS One. 2016 Dec 16;11(12):e0168357
pubmed: 27992585
J Microbiol Biotechnol. 2013 Mar;23(3):382-9
pubmed: 23462012
Int J Syst Bacteriol. 1999 Apr;49 Pt 2:545-56
pubmed: 10319475
Environ Microbiol. 2004 Jan;6(1):73-8
pubmed: 14686943
Nat Methods. 2013 Oct;10(10):996-8
pubmed: 23955772
Waste Manag. 2018 Jun;76:394-403
pubmed: 29606531
Bioresour Technol. 2013 Oct;145:25-32
pubmed: 23562175
Appl Microbiol Biotechnol. 2014 Jan;98(1):465-74
pubmed: 23529681
ISME J. 2018 Jan;12(1):112-123
pubmed: 28895946
Appl Environ Microbiol. 2008 Jun;74(11):3610-4
pubmed: 18408059
Appl Environ Microbiol. 1988 Jun;54(6):1457-61
pubmed: 16347656
Curr Opin Biotechnol. 2003 Jun;14(3):270-6
pubmed: 12849779
J Gen Appl Microbiol. 2018 Nov 9;64(5):221-231
pubmed: 29760349
Microb Ecol. 2000 Apr;39(3):246-262
pubmed: 12035101
ISME J. 2009 Jun;3(6):700-14
pubmed: 19242531
ISME J. 2015 Aug;9(8):1710-22
pubmed: 25615435
Appl Environ Microbiol. 1980 Sep;40(3):626-32
pubmed: 16345640
Appl Environ Microbiol. 2001 Apr;67(4):1800-4
pubmed: 11282636
Antonie Van Leeuwenhoek. 2002 Aug;81(1-4):263-70
pubmed: 12448725
Int J Syst Evol Microbiol. 2002 Sep;52(Pt 5):1729-1735
pubmed: 12361280
Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):391-399
pubmed: 11931147
Int J Syst Evol Microbiol. 2005 Jul;55(Pt 4):1697-1703
pubmed: 16014504
Bioresour Technol. 2015 Aug;190:543-9
pubmed: 25739997
Int J Syst Evol Microbiol. 2006 Oct;56(Pt 10):2331-2335
pubmed: 17012556
Sci Total Environ. 2009 Jun 1;407(12):3611-9
pubmed: 18573518

Auteurs

Hui-Zhong Wang (HZ)

College of Architecture and Environment, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China.

Xiao-Meng Lv (XM)

Institute of New Energy and Low-Carbon Technology, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China.

Yue Yi (Y)

College of Architecture and Environment, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China.

Dan Zheng (D)

College of Architecture and Environment, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China.

Min Gou (M)

College of Architecture and Environment, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China.

Yong Nie (Y)

Department of Energy and Resources, College of Engineering, Peking University, Beijing, 100871, China.

Bing Hu (B)

Department of Energy and Resources, College of Engineering, Peking University, Beijing, 100871, China.

Masaru K Nobu (MK)

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, 305-8566, Japan.

Takashi Narihiro (T)

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, 305-8566, Japan.

Yue-Qin Tang (YQ)

College of Architecture and Environment, Sichuan University, No. 24, South Section 1, First Ring Road, Chengdu, Sichuan, 610065, China. tangyq@scu.edu.

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Classifications MeSH