V V Poroikov

Affiliations

Department of Bioinformatics, Institute of Biomedical Chemistry , Moscow , Russia.

ORCID: https://orcid.org/0000-0001-7937-2621

Publications (44)

Prediction of Drug-Drug Interactions Related to Inhibition or Induction of Drug-Metabolizing Enzymes.

Current topics in medicinal chemistry

Avec: Alexander V Dmitriev , Alexey A Lagunin , Dmitry А Karasev , Anastasia V Rudik , Pavel V Pogodin , Dmitry A Filimonov , Vladimir V Poroikov

Improving (Q)SAR predictions by examining bias in the selection of compounds for experimental testing.

SAR and QSAR in environmental research

Avec: P V Pogodin , A A Lagunin , D A Filimonov , M C Nicklaus , V V Poroikov

[Discovering new antiretroviral compounds in "Big Data" chemical space of the SAVI library].

Biomeditsinskaia khimiia

Avec: P I Savosina , L A Stolbov , D S Druzhilovskiy , D A Filimonov , M C Nicklaus , V V Poroikov

(Q)SAR Models of HIV-1 Protein Inhibition by Drug-Like Compounds.

Molecules (Basel, Switzerland)

Avec: Leonid A Stolbov , Dmitry S Druzhilovskiy , Dmitry A Filimonov , Marc C Nicklaus , Vladimir V Poroikov

[Possibilities of in silico estimations for the development of pharmaceutical composition phytoladaptogene cytotoxic for bladder cancer cells].

Biomeditsinskaia khimiia

Avec: N S Ionov , M A Baryshnikova , E V Bocharov , P V Pogodin , A A Lagunin , D A Filimonov , R V Karpova , V S Kosorukov , I S Stilidi , V B Matveev , O A Bocharova , V V Poroikov

Computer-aided discovery of pleiotropic effects: Anti-inflammatory action of dithioloquinolinethiones as a case study.

SAR and QSAR in environmental research

Avec: S M Medvedeva , K S Shikhaliev , A A Geronikaki , P I Savosina , D S Druzhilovskiy , V V Poroikov

HGMMX: Host Gut Microbiota Metabolism Xenobiotics Database.

Journal of chemical information and modeling

Avec: Anton S Kolodnitsky , Nikita S Ionov , Anastasia V Rudik , Dmitry A Filimonov , Vladimir V Poroikov

PASS-based prediction of metabolites detection in biological systems.

SAR and QSAR in environmental research

Avec: A V Rudik , A V Dmitriev , A A Lagunin , D A Filimonov , V V Poroikov

[Xenobiotic toxicity prediction combined with xenobiotic metabolism prediction in the human body].

Biomeditsinskaia khimiia

Avec: A V Rudik , A V Dmitriev , A A Lagunin , S M Ivanov , D A Filimonov , V V Poroikov

Hydroperoxy steroids and triterpenoids derived from plant and fungi: Origin, structures and biological activities.

The Journal of steroid biochemistry and molecular biology

Avec: Vera A Vil , Alexander O Terent'ev , Nick Savidov , Tatyana A Gloriozova , Vladimir V Poroikov , Tatyana A Pounina , Valery M Dembitsky

In Silico Prediction of Drug-Drug Interactions Mediated by Cytochrome P450 Isoforms.

Pharmaceutics

Avec: Alexander V Dmitriev , Anastassia V Rudik , Dmitry A Karasev , Pavel V Pogodin , Alexey A Lagunin , Dmitry A Filimonov , Vladimir V Poroikov

Antitumor Profile of Carbon-Bridged Steroids (CBS) and Triterpenoids.

Marine drugs

Avec: Valery M Dembitsky , Tatyana A Gloriozova , Vladimir V Poroikov

The method predicting interaction between protein targets and small-molecular ligands with the wide applicability domain.

Computational biology and chemistry

Avec: Dmitry A Karasev , Boris N Sobolev , Alexey A Lagunin , Dmitry A Filimonov , Vladimir V Poroikov

SAR based on self consistent classifier.

SAR and QSAR in environmental research

Avec: L A Stolbov , D A Filimonov , V V Poroikov

Blood Plasma Proteome: A Meta-Analysis of the Results of Protein Quantification in Human Blood by Targeted Mass Spectrometry.

International journal of molecular sciences

Avec: Anna A Kliuchnikova , Svetlana E Novikova , Ekaterina V Ilgisonis , Olga I Kiseleva , Ekaterina V Poverennaya , Victor G Zgoda , Sergei A Moshkovskii , Vladimir V Poroikov , Andrey V Lisitsa , Alexander I Archakov , Elena A Ponomarenko

CLC-Pred 2.0: A Freely Available Web Application for In Silico Prediction of Human Cell Line Cytotoxicity and Molecular Mechanisms of Action for Druglike Compounds.

International journal of molecular sciences

Avec: Alexey A Lagunin , Anastasia V Rudik , Pavel V Pogodin , Polina I Savosina , Olga A Tarasova , Alexander V Dmitriev , Sergey M Ivanov , Nadezhda Y Biziukova , Dmitry S Druzhilovskiy , Dmitry A Filimonov , Vladimir V Poroikov

MDM-Pred: a freely available web application for predicting the metabolism of drug-like compounds by the gut microbiota.

SAR and QSAR in environmental research

Avec: A S Kolodnitsky , N S Ionov , A V Rudik , A A Lagunin , D A Filimonov , V V Poroikov

DIGEP-Pred 2.0: A web application for predicting drug-induced cell signaling and gene expression changes.

Molecular informatics

Avec: Sergey M Ivanov , Anastasia V Rudik , Alexey A Lagunin , Dmitry A Filimonov , Vladimir V Poroikov

Quantitative Prediction of Human Immunodeficiency Virus Drug Resistance.

Viruses

Avec: Ekaterina A Stolbova , Leonid A Stolbov , Dmitry A Filimonov , Vladimir V Poroikov , Olga A Tarasova

Drug-drug interaction prediction using PASS.

SAR and QSAR in environmental research

Avec: A V Dmitriev , D A Filimonov , A V Rudik , P V Pogodin , D A Karasev , A A Lagunin , V V Poroikov

AntiBac-Pred: A Web Application for Predicting Antibacterial Activity of Chemical Compounds.

Journal of chemical information and modeling

Avec: Pavel V Pogodin , Alexey A Lagunin , Anastasia V Rudik , Dmitry S Druzhilovskiy , Dmitry A Filimonov , Vladimir V Poroikov

Antiprotozoal and Antitumor Activity of Natural Polycyclic Endoperoxides: Origin, Structures and Biological Activity.

Molecules (Basel, Switzerland)

Avec: Valery M Dembitsky , Ekaterina Ermolenko , Nick Savidov , Tatyana A Gloriozova , Vladimir V Poroikov

MetaTox 2.0: Estimating the Biological Activity Spectra of Drug-like Compounds Taking into Account Probable Biotransformations.

ACS omega

Avec: Anastasia V Rudik , Alexander V Dmitriev , Alexey A Lagunin , Dmitry A Filimonov , Vladimir V Poroikov

Novel mitochondria-targeting compounds selectively kill human leukemia cells.

Leukemia

Avec: Svetlana B Panina , Jingqi Pei , Natalia Baran , Elissa Tjahjono , Shraddha Patel , Gheath Alatrash , Sergej Konoplev , Leonid A Stolbov , Vladimir V Poroikov , Marina Konopleva , Natalia V Kirienko

New Positive TRPC6 Modulator Penetrates Blood-Brain Barrier, Eliminates Synaptic Deficiency and Restores Memory Deficit in 5xFAD Mice.

International journal of molecular sciences

Avec: Nikita Zernov , Alexander V Veselovsky , Vladimir V Poroikov , Daria Melentieva , Anastasia Bolshakova , Elena Popugaeva

Anti-inflammatory action of new hybrid

SAR and QSAR in environmental research

Avec: S M Medvedeva , A Petrou , M Fesatidou , A Gavalas , A A Geronikaki , P I Savosina , D S Druzhilovskiy , V V Poroikov , K S Shikhaliev , V G Kartsev

Pharmacological profile of natural and synthetic compounds with rigid adamantane-based scaffolds as potential agents for the treatment of neurodegenerative diseases.

Biochemical and biophysical research communications

Avec: Valery M Dembitsky , Tatyana A Gloriozova , Vladimir V Poroikov

Naturally occurring of α,β-diepoxy-containing compounds: origin, structures, and biological activities.

Applied microbiology and biotechnology

Avec: Vera Vil , Tatyana A Gloriozova , Vladimir V Poroikov , Alexander O Terent'ev , Nick Savidov , Valery M Dembitsky

Data Mining Approach for Extraction of Useful Information About Biologically Active Compounds from Publications.

Journal of chemical information and modeling

Avec: Olga A Tarasova , Nadezhda Yu Biziukova , Dmitry A Filimonov , Vladimir V Poroikov , Marc C Nicklaus

Extraction of Data on Parent Compounds and Their Metabolites from Texts of Scientific Abstracts.

Journal of chemical information and modeling

Avec: Olga A Tarasova , Nadezhda Yu Biziukova , Anastassia V Rudik , Alexander V Dmitriev , Dmitry A Filimonov , Vladimir V Poroikov

Computer-Aided Estimation of Biological Activity Profiles of Drug-Like Compounds Taking into Account Their Metabolism in Human Body.

International journal of molecular sciences

Avec: Dmitry A Filimonov , Anastassia V Rudik , Alexander V Dmitriev , Vladimir V Poroikov

COVID-19: Analysis of Drug Repositioning Practice.

Pharmaceutical chemistry journal

Avec: P I Savosina , D S Druzhilovskii , V V Poroikov

Chemical Diversity of Soft Coral Steroids and Their Pharmacological Activities.

Marine drugs

Avec: Ekaterina V Ermolenko , Andrey B Imbs , Tatyana A Gloriozova , Vladimir V Poroikov , Tatyana V Sikorskaya , Valery M Dembitsky

Relationships between the Structure and Severe Drug-Induced Liver Injury for Low, Medium, and High Doses of Drugs.

Chemical research in toxicology

Avec: Sergey M Ivanov , Alexey A Lagunin , Dmitry A Filimonov , Vladimir V Poroikov

Computer-aided Evaluation of Polyvalent Medications' Pharmacological Potential. Multiphytoadaptogen as a Case Study.

Molecular informatics

Avec: O A Bocharova , N S Ionov , I V Kazeev , V E Shevchenko , E V Bocharov , R V Karpova , O P Sheychenko , A A Aksyonov , S V Chulkova , V G Kucheryanu , A V Revishchin , G V Pavlova , V S Kosorukov , D A Filimonov , A A Lagunin , V B Matveev , N V Pyatigorskaya , I S Stilidi , V V Poroikov

Chemical named entity recognition in the texts of scientific publications using the naïve Bayes classifier approach.

Journal of cheminformatics

Avec: O A Tarasova , A V Rudik , N Yu Biziukova , D A Filimonov , V V Poroikov

Towards Novel Potential Molecular Targets for Antidepressant and Antipsychotic Pharmacotherapies.

International journal of molecular sciences

Avec: Yuriy M Kositsyn , Murilo S de Abreu , Tatiana O Kolesnikova , Alexey A Lagunin , Vladimir V Poroikov , Hasmik S Harutyunyan , Konstantin B Yenkoyan , Allan V Kalueff

Transcriptome-based analysis of human peripheral blood reveals regulators of immune response in different viral infections.

Frontiers in immunology

Avec: Sergey M Ivanov , Olga A Tarasova , Vladimir V Poroikov

Ligand-based virtual screening and biological evaluation of inhibitors of

SAR and QSAR in environmental research

Avec: P V Pogodin , E G Salina , V V Semenov , M M Raihstat , D S Druzhilovskiy , D A Filimonov , V V Poroikov

[Computer-aided drug design: from discovery of novel pharmaceutical agents to systems pharmacology].

Biomeditsinskaia khimiia

Avec: V V Poroikov

Molecular descriptor analysis of approved drugs using unsupervised learning for drug repurposing.

Computers in biology and medicine

Avec: Sita Sirisha Madugula , Lijo John , Selvaraman Nagamani , Anamika Singh Gaur , Vladimir V Poroikov , G Narahari Sastry

Inhibitory Effects of 7-Methylguanine and Its Metabolite 8-Hydroxy-7-Methylguanine on Human Poly(ADP-Ribose) Polymerase 1.

Biochemistry. Biokhimiia

Avec: Tatyana A Kurgina , Stanislav I Shram , Mikhail M Kutuzov , Tatyana V Abramova , Tatyana A Shcherbakova , Ekaterina A Maltseva , Vladimir V Poroikov , Olga I Lavrik , Vytas K Švedas , Dmitry K Nilov

Web Service for HIV Drug Resistance Prediction Based on Analysis of Amino Acid Substitutions in Main Drug Targets.

Viruses

Avec: Anastasiia Iu Paremskaia , Anastassia V Rudik , Dmitry A Filimonov , Alexey A Lagunin , Vladimir V Poroikov , Olga A Tarasova

Identification of Molecular Mechanisms Involved in Viral Infection Progression Based on Text Mining: Case Study for HIV Infection.

International journal of molecular sciences

Avec: Olga Tarasova , Nadezhda Biziukova , Andrey Shemshura , Dmitry Filimonov , Dmitry Kireev , Anastasia Pokrovskaya , Vladimir V Poroikov

Réseau de co-auteurs

Vladimir V Poroikov 29 collaborations

Dmitry A Filimonov 15 collaborations

D A Filimonov 11 collaborations

Alexey A Lagunin 10 collaborations

A A Lagunin 7 collaborations

Alexander V Dmitriev 6 collaborations

Anastasia V Rudik 6 collaborations

Tatyana A Gloriozova 6 collaborations

Valery M Dembitsky 6 collaborations

Olga A Tarasova 6 collaborations

A V Rudik 5 collaborations

Pavel V Pogodin 4 collaborations

P V Pogodin 4 collaborations

P I Savosina 4 collaborations

D S Druzhilovskiy 4 collaborations

Anastassia V Rudik 4 collaborations

Sergey M Ivanov 4 collaborations

Leonid A Stolbov 3 collaborations

Dmitry S Druzhilovskiy 3 collaborations

N S Ionov 3 collaborations

A V Dmitriev 3 collaborations

Nick Savidov 3 collaborations

M C Nicklaus 2 collaborations

L A Stolbov 2 collaborations

Marc C Nicklaus 2 collaborations

E V Bocharov 2 collaborations

R V Karpova 2 collaborations

V S Kosorukov 2 collaborations

I S Stilidi 2 collaborations

V B Matveev 2 collaborations

O A Bocharova 2 collaborations

S M Medvedeva 2 collaborations

K S Shikhaliev 2 collaborations

A A Geronikaki 2 collaborations

Alexander O Terent'ev 2 collaborations

Dmitry A Karasev 2 collaborations

Nadezhda Yu Biziukova 2 collaborations

Dmitry А Karasev 1 collaboration

M A Baryshnikova 1 collaboration

Anton S Kolodnitsky 1 collaboration

Nikita S Ionov 1 collaboration

S M Ivanov 1 collaboration

Vera A Vil 1 collaboration

Tatyana A Pounina 1 collaboration

Boris N Sobolev 1 collaboration

Anna A Kliuchnikova 1 collaboration

Svetlana E Novikova 1 collaboration

Ekaterina V Ilgisonis 1 collaboration

Olga I Kiseleva 1 collaboration

Ekaterina V Poverennaya 1 collaboration

Victor G Zgoda 1 collaboration

Sergei A Moshkovskii 1 collaboration

Andrey V Lisitsa 1 collaboration

Alexander I Archakov 1 collaboration

Elena A Ponomarenko 1 collaboration

Polina I Savosina 1 collaboration

Nadezhda Y Biziukova 1 collaboration

A S Kolodnitsky 1 collaboration

Ekaterina A Stolbova 1 collaboration

D A Karasev 1 collaboration

Ekaterina Ermolenko 1 collaboration

Svetlana B Panina 1 collaboration

Jingqi Pei 1 collaboration

Natalia Baran 1 collaboration

Elissa Tjahjono 1 collaboration

Shraddha Patel 1 collaboration

Gheath Alatrash 1 collaboration

Sergej Konoplev 1 collaboration

Marina Konopleva 1 collaboration

Natalia V Kirienko 1 collaboration

Nikita Zernov 1 collaboration

Alexander V Veselovsky 1 collaboration

Daria Melentieva 1 collaboration

Anastasia Bolshakova 1 collaboration

Elena Popugaeva 1 collaboration

A Petrou 1 collaboration

M Fesatidou 1 collaboration

A Gavalas 1 collaboration

V G Kartsev 1 collaboration

Vera Vil 1 collaboration

D S Druzhilovskii 1 collaboration

Ekaterina V Ermolenko 1 collaboration

Andrey B Imbs 1 collaboration

Tatyana V Sikorskaya 1 collaboration

I V Kazeev 1 collaboration

V E Shevchenko 1 collaboration

O P Sheychenko 1 collaboration

A A Aksyonov 1 collaboration

S V Chulkova 1 collaboration

V G Kucheryanu 1 collaboration

A V Revishchin 1 collaboration

G V Pavlova 1 collaboration

N V Pyatigorskaya 1 collaboration

O A Tarasova 1 collaboration

N Yu Biziukova 1 collaboration

Yuriy M Kositsyn 1 collaboration

Murilo S de Abreu 1 collaboration

Tatiana O Kolesnikova 1 collaboration

Hasmik S Harutyunyan 1 collaboration

Konstantin B Yenkoyan 1 collaboration

Allan V Kalueff 1 collaboration

E G Salina 1 collaboration

V V Semenov 1 collaboration

M M Raihstat 1 collaboration

Sita Sirisha Madugula 1 collaboration

Lijo John 1 collaboration

Selvaraman Nagamani 1 collaboration

Anamika Singh Gaur 1 collaboration

G Narahari Sastry 1 collaboration

Tatyana A Kurgina 1 collaboration

Stanislav I Shram 1 collaboration

Mikhail M Kutuzov 1 collaboration

Tatyana V Abramova 1 collaboration

Tatyana A Shcherbakova 1 collaboration

Ekaterina A Maltseva 1 collaboration

Olga I Lavrik 1 collaboration

Vytas K Švedas 1 collaboration

Dmitry K Nilov 1 collaboration

Anastasiia Iu Paremskaia 1 collaboration

Olga Tarasova 1 collaboration

Nadezhda Biziukova 1 collaboration

Andrey Shemshura 1 collaboration

Dmitry Filimonov 1 collaboration

Dmitry Kireev 1 collaboration

Anastasia Pokrovskaya 1 collaboration