Timo Dickscheid

Affiliations

Institute of Neuroscience and Medicine (INM-1), Research Centre Jülich, Wilhelm-Johnen-Str., Jülich 52428, Germany; Helmholtz AI, Research Centre Jülich, Wilhelm-Johnen-Str., Jülich 52428, Germany; Institute of Computer Science, Heinrich Heine University Düsseldorf, Universitätsstr. 1, Düsseldorf 40225, Germany.

Publications (17)

Contour proposal networks for biomedical instance segmentation.

Medical image analysis

Avec: Eric Upschulte , Stefan Harmeling , Katrin Amunts , Timo Dickscheid

A framework to improve the alignment of individual cytoarchitectonic maps of the Julich-Brain atlas using cortical folding landmarks.

Cerebral cortex (New York, N.Y. : 1991)

Avec: Xiaoyu Wang , Yann Leprince , Jessica Lebenberg , Clement Langlet , Hartmut Mohlberg , Denis Rivière , Guillaume Auzias , Timo Dickscheid , Katrin Amunts , Jean-François Mangin

Bringing Anatomical Information into Neuronal Network Models.

Advances in experimental medicine and biology

Avec: S J van Albada , A Morales-Gregorio , T Dickscheid , A Goulas , R Bakker , S Bludau , G Palm , C-C Hilgetag , M Diesmann

Semaphorin-3A regulates liver sinusoidal endothelial cell porosity and promotes hepatic steatosis.

Nature cardiovascular research

Avec: Daniel Eberhard , Sydney Balkenhol , Andrea Köster , Paula Follert , Eric Upschulte , Philipp Ostermann , Philip Kirschner , Celina Uhlemeyer , Iannis Charnay , Christina Preuss , Sandra Trenkamp , Bengt-Frederik Belgardt , Timo Dickscheid , Irene Esposito , Michael Roden , Eckhard Lammert

Deep learning networks reflect cytoarchitectonic features used in brain mapping.

Scientific reports

Avec: Kai Kiwitz , Christian Schiffer , Hannah Spitzer , Timo Dickscheid , Katrin Amunts

AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures.

Scientific data

Avec: Heidi Kleven , Thomas H Gillespie , Lyuba Zehl , Timo Dickscheid , Jan G Bjaalie , Maryann E Martone , Trygve B Leergaard

Cytoarchitectonic mapping of the human frontal operculum-New correlates for a variety of brain functions.

Frontiers in human neuroscience

Avec: Nina Unger , Martina Haeck , Simon B Eickhoff , Julia A Camilleri , Timo Dickscheid , Hartmut Mohlberg , Sebastian Bludau , Svenja Caspers , Katrin Amunts

Convolutional neural networks for cytoarchitectonic brain mapping at large scale.

NeuroImage

Avec: Christian Schiffer , Hannah Spitzer , Kai Kiwitz , Nina Unger , Konrad Wagstyl , Alan C Evans , Stefan Harmeling , Katrin Amunts , Timo Dickscheid

Brain simulation as a cloud service: The Virtual Brain on EBRAINS.

NeuroImage

Avec: Michael Schirner , Lia Domide , Dionysios Perdikis , Paul Triebkorn , Leon Stefanovski , Roopa Pai , Paula Prodan , Bogdan Valean , Jessica Palmer , Chloê Langford , André Blickensdörfer , Michiel van der Vlag , Sandra Diaz-Pier , Alexander Peyser , Wouter Klijn , Dirk Pleiter , Anne Nahm , Oliver Schmid , Marmaduke Woodman , Lyuba Zehl , Jan Fousek , Spase Petkoski , Lionel Kusch , Meysam Hashemi , Daniele Marinazzo , Jean-François Mangin , Agnes Flöel , Simisola Akintoye , Bernd Carsten Stahl , Michael Cepic , Emily Johnson , Gustavo Deco , Anthony R McIntosh , Claus C Hilgetag , Marc Morgan , Bernd Schuller , Alex Upton , Colin McMurtrie , Timo Dickscheid , Jan G Bjaalie , Katrin Amunts , Jochen Mersmann , Viktor Jirsa , Petra Ritter

The multimodality cell segmentation challenge: toward universal solutions.

Nature methods

Avec: Jun Ma , Ronald Xie , Shamini Ayyadhury , Cheng Ge , Anubha Gupta , Ritu Gupta , Song Gu , Yao Zhang , Gihun Lee , Joonkee Kim , Wei Lou , Haofeng Li , Eric Upschulte , Timo Dickscheid , José Guilherme de Almeida , Yixin Wang , Lin Han , Xin Yang , Marco Labagnara , Vojislav Gligorovski , Maxime Scheder , Sahand Jamal Rahi , Carly Kempster , Alice Pollitt , Leon Espinosa , Tâm Mignot , Jan Moritz Middeke , Jan-Niklas Eckardt , Wangkai Li , Zhaoyang Li , Xiaochen Cai , Bizhe Bai , Noah F Greenwald , David Van Valen , Erin Weisbart , Beth A Cimini , Trevor Cheung , Oscar Brück , Gary D Bader , Bo Wang

Cytoarchitecture, probability maps and segregation of the human insula.

NeuroImage

Avec: Julian Quabs , Svenja Caspers , Claudia Schöne , Hartmut Mohlberg , Sebastian Bludau , Timo Dickscheid , Katrin Amunts

BigBrain 3D atlas of cortical layers: Cortical and laminar thickness gradients diverge in sensory and motor cortices.

PLoS biology

Avec: Konrad Wagstyl , Stéphanie Larocque , Guillem Cucurull , Claude Lepage , Joseph Paul Cohen , Sebastian Bludau , Nicola Palomero-Gallagher , Lindsay B Lewis , Thomas Funck , Hannah Spitzer , Timo Dickscheid , Paul C Fletcher , Adriana Romero , Karl Zilles , Katrin Amunts , Yoshua Bengio , Alan C Evans

The BigBrainWarp toolbox for integration of BigBrain 3D histology with multimodal neuroimaging.

eLife

Avec: Casey Paquola , Jessica Royer , Lindsay B Lewis , Claude Lepage , Tristan Glatard , Konrad Wagstyl , Jordan DeKraker , Paule-J Toussaint , Sofie L Valk , Louis Collins , Ali R Khan , Katrin Amunts , Alan C Evans , Timo Dickscheid , Boris Bernhardt

Mapping Cytoarchitectonics and Receptor Architectonics to Understand Brain Function and Connectivity.

Biological psychiatry

Avec: Daniel Zachlod , Nicola Palomero-Gallagher , Timo Dickscheid , Katrin Amunts

Characterization of regional differences in resting-state fMRI with a data-driven network model of brain dynamics.

Science advances

Avec: Viktor Sip , Meysam Hashemi , Timo Dickscheid , Katrin Amunts , Spase Petkoski , Viktor Jirsa

Effect of in-plane and out-of-plane bifurcated microfluidic channels on the flow of aggregating red blood cells.

Lab on a chip

Avec: Amirreza Gholivand , Olivera Korculanin , Knut Dahlhoff , Mehrnaz Babaki , Timo Dickscheid , Minne Paul Lettinga

Generative Modelling of Cortical Receptor Distributions from Cytoarchitectonic Images in the Macaque Brain.

Neuroinformatics

Avec: Ahmed Nebli , Christian Schiffer , Meiqi Niu , Nicola Palomero-Gallagher , Katrin Amunts , Timo Dickscheid

Réseau de co-auteurs

Katrin Amunts 12 collaborations

Eric Upschulte 3 collaborations

Hartmut Mohlberg 3 collaborations

Christian Schiffer 3 collaborations

Hannah Spitzer 3 collaborations

Sebastian Bludau 3 collaborations

Konrad Wagstyl 3 collaborations

Alan C Evans 3 collaborations

Nicola Palomero-Gallagher 3 collaborations

Stefan Harmeling 2 collaborations

Jean-François Mangin 2 collaborations

Kai Kiwitz 2 collaborations

Lyuba Zehl 2 collaborations

Jan G Bjaalie 2 collaborations

Nina Unger 2 collaborations

Svenja Caspers 2 collaborations

Spase Petkoski 2 collaborations

Meysam Hashemi 2 collaborations

Viktor Jirsa 2 collaborations

Claude Lepage 2 collaborations

Lindsay B Lewis 2 collaborations

Xiaoyu Wang 1 collaboration

Yann Leprince 1 collaboration

Jessica Lebenberg 1 collaboration

Clement Langlet 1 collaboration

Denis Rivière 1 collaboration

Guillaume Auzias 1 collaboration

S J van Albada 1 collaboration

A Morales-Gregorio 1 collaboration

T Dickscheid 1 collaboration

A Goulas 1 collaboration

R Bakker 1 collaboration

S Bludau 1 collaboration

G Palm 1 collaboration

C-C Hilgetag 1 collaboration

M Diesmann 1 collaboration

Daniel Eberhard 1 collaboration

Sydney Balkenhol 1 collaboration

Andrea Köster 1 collaboration

Paula Follert 1 collaboration

Philipp Ostermann 1 collaboration

Philip Kirschner 1 collaboration

Celina Uhlemeyer 1 collaboration

Iannis Charnay 1 collaboration

Christina Preuss 1 collaboration

Sandra Trenkamp 1 collaboration

Bengt-Frederik Belgardt 1 collaboration

Irene Esposito 1 collaboration

Michael Roden 1 collaboration

Eckhard Lammert 1 collaboration

Heidi Kleven 1 collaboration

Thomas H Gillespie 1 collaboration

Maryann E Martone 1 collaboration

Trygve B Leergaard 1 collaboration

Martina Haeck 1 collaboration

Simon B Eickhoff 1 collaboration

Julia A Camilleri 1 collaboration

Michael Schirner 1 collaboration

Lia Domide 1 collaboration

Dionysios Perdikis 1 collaboration

Paul Triebkorn 1 collaboration

Leon Stefanovski 1 collaboration

Roopa Pai 1 collaboration

Paula Prodan 1 collaboration

Bogdan Valean 1 collaboration

Jessica Palmer 1 collaboration

Chloê Langford 1 collaboration

André Blickensdörfer 1 collaboration

Michiel van der Vlag 1 collaboration

Sandra Diaz-Pier 1 collaboration

Alexander Peyser 1 collaboration

Wouter Klijn 1 collaboration

Dirk Pleiter 1 collaboration

Anne Nahm 1 collaboration

Oliver Schmid 1 collaboration

Marmaduke Woodman 1 collaboration

Jan Fousek 1 collaboration

Lionel Kusch 1 collaboration

Daniele Marinazzo 1 collaboration

Agnes Flöel 1 collaboration

Simisola Akintoye 1 collaboration

Bernd Carsten Stahl 1 collaboration

Michael Cepic 1 collaboration

Emily Johnson 1 collaboration

Gustavo Deco 1 collaboration

Anthony R McIntosh 1 collaboration

Claus C Hilgetag 1 collaboration

Marc Morgan 1 collaboration

Bernd Schuller 1 collaboration

Alex Upton 1 collaboration

Colin McMurtrie 1 collaboration

Jochen Mersmann 1 collaboration

Petra Ritter 1 collaboration

Jun Ma 1 collaboration

Ronald Xie 1 collaboration

Shamini Ayyadhury 1 collaboration

Cheng Ge 1 collaboration

Anubha Gupta 1 collaboration

Ritu Gupta 1 collaboration

Song Gu 1 collaboration

Yao Zhang 1 collaboration

Gihun Lee 1 collaboration

Joonkee Kim 1 collaboration

Wei Lou 1 collaboration

Haofeng Li 1 collaboration

José Guilherme de Almeida 1 collaboration

Yixin Wang 1 collaboration

Lin Han 1 collaboration

Xin Yang 1 collaboration

Marco Labagnara 1 collaboration

Vojislav Gligorovski 1 collaboration

Maxime Scheder 1 collaboration

Sahand Jamal Rahi 1 collaboration

Carly Kempster 1 collaboration

Alice Pollitt 1 collaboration

Leon Espinosa 1 collaboration

Tâm Mignot 1 collaboration

Jan Moritz Middeke 1 collaboration

Jan-Niklas Eckardt 1 collaboration

Wangkai Li 1 collaboration

Zhaoyang Li 1 collaboration

Xiaochen Cai 1 collaboration

Bizhe Bai 1 collaboration

Noah F Greenwald 1 collaboration

David Van Valen 1 collaboration

Erin Weisbart 1 collaboration

Beth A Cimini 1 collaboration

Trevor Cheung 1 collaboration

Oscar Brück 1 collaboration

Gary D Bader 1 collaboration

Bo Wang 1 collaboration

Julian Quabs 1 collaboration

Claudia Schöne 1 collaboration

Stéphanie Larocque 1 collaboration

Guillem Cucurull 1 collaboration

Joseph Paul Cohen 1 collaboration

Thomas Funck 1 collaboration

Paul C Fletcher 1 collaboration

Adriana Romero 1 collaboration

Karl Zilles 1 collaboration

Yoshua Bengio 1 collaboration

Casey Paquola 1 collaboration

Jessica Royer 1 collaboration

Tristan Glatard 1 collaboration

Jordan DeKraker 1 collaboration

Paule-J Toussaint 1 collaboration

Sofie L Valk 1 collaboration

Louis Collins 1 collaboration

Ali R Khan 1 collaboration

Boris Bernhardt 1 collaboration

Daniel Zachlod 1 collaboration

Viktor Sip 1 collaboration

Amirreza Gholivand 1 collaboration

Olivera Korculanin 1 collaboration

Knut Dahlhoff 1 collaboration

Mehrnaz Babaki 1 collaboration

Minne Paul Lettinga 1 collaboration

Ahmed Nebli 1 collaboration

Meiqi Niu 1 collaboration