Silvia Domcke

Affiliations

Department of Genome Sciences, University of Washington, Seattle, WA, USA.

Publications (11)

A time-resolved, multi-symbol molecular recorder via sequential genome editing.

Nature

Avec: Junhong Choi , Wei Chen , Anna Minkina , Florence M Chardon , Chase C Suiter , Samuel G Regalado , Silvia Domcke , Nobuhiko Hamazaki , Choli Lee , Beth Martin , Riza M Daza , Jay Shendure

Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements.

bioRxiv : the preprint server for biology

Avec: Florence M Chardon , Troy A McDiarmid , Nicholas F Page , Beth Martin , Silvia Domcke , Samuel G Regalado , Jean-Beno Æt Lalanne , Diego Calderon , Lea M Starita , Stephan J Sanders , Nadav Ahituv , Jay Shendure

Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements.

Nature communications

Avec: Florence M Chardon , Troy A McDiarmid , Nicholas F Page , Riza M Daza , Beth K Martin , Silvia Domcke , Samuel G Regalado , Jean-Benoît Lalanne , Diego Calderon , Xiaoyi Li , Lea M Starita , Stephan J Sanders , Nadav Ahituv , Jay Shendure

DNA sequence and chromatin modifiers cooperate to confer epigenetic bistability at imprinting control regions.

Nature genetics

Avec: Stefan Butz , Nina Schmolka , Ino D Karemaker , Rodrigo Villaseñor , Isabel Schwarz , Silvia Domcke , Esther C H Uijttewaal , Julian Jude , Florian Lienert , Arnaud R Krebs , Nathalie P de Wagenaar , Xue Bao , Johannes Zuber , Ulrich Elling , Dirk Schübeler , Tuncay Baubec

Multiplex profiling of developmental cis-regulatory elements with quantitative single-cell expression reporters.

Nature methods

Avec: Jean-Benoît Lalanne , Samuel G Regalado , Silvia Domcke , Diego Calderon , Beth K Martin , Xiaoyi Li , Tony Li , Chase C Suiter , Choli Lee , Cole Trapnell , Jay Shendure

A reference cell tree will serve science better than a reference cell atlas.

Cell

Avec: Silvia Domcke , Jay Shendure

Non-coding variants are a rare cause of recessive developmental disorders in trans with coding variants.

Genetics in medicine : official journal of the American College of Medical Genetics

Avec: Jenny Lord , Carolina J Oquendo , Htoo A Wai , John G Holloway , Alexandra Martin-Geary , Alexander Jm Blakes , Elena Arciero , Silvia Domcke , Anne-Marie Childs , Karen Low , Julia Rankin , Auteur inconnu , Diana Baralle , Hilary C Martin , Nicola Whiffin

A human cell atlas of fetal chromatin accessibility.

Science (New York, N.Y.)

Avec: Silvia Domcke , Andrew J Hill , Riza M Daza , Junyue Cao , Diana R O'Day , Hannah A Pliner , Kimberly A Aldinger , Dmitry Pokholok , Fan Zhang , Jennifer H Milbank , Michael A Zager , Ian A Glass , Frank J Steemers , Dan Doherty , Cole Trapnell , Darren A Cusanovich , Jay Shendure

Multiplex single-cell chemical genomics reveals the kinase dependence of the response to targeted therapy.

bioRxiv : the preprint server for biology

Avec: José L McFaline-Figueroa , Sanjay Srivatsan , Andrew J Hill , Molly Gasperini , Dana L Jackson , Lauren Saunders , Silvia Domcke , Samuel G Regalado , Paul Lazarchuck , Sarai Alvarez , Raymond J Monnat , Jay Shendure , Cole Trapnell

Multiplex single-cell chemical genomics reveals the kinase dependence of the response to targeted therapy.

Cell genomics

Avec: José L McFaline-Figueroa , Sanjay Srivatsan , Andrew J Hill , Molly Gasperini , Dana L Jackson , Lauren Saunders , Silvia Domcke , Samuel G Regalado , Paul Lazarchuck , Sarai Alvarez , Raymond J Monnat , Jay Shendure , Cole Trapnell

Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation.

Nature genetics

Avec: Sebastian Kaluscha , Silvia Domcke , Christiane Wirbelauer , Michael B Stadler , Sevi Durdu , Lukas Burger , Dirk Schübeler

Réseau de co-auteurs

Jay Shendure 8 collaborations

Samuel G Regalado 6 collaborations

Cole Trapnell 4 collaborations

Florence M Chardon 3 collaborations

Riza M Daza 3 collaborations

Diego Calderon 3 collaborations

Andrew J Hill 3 collaborations

Chase C Suiter 2 collaborations

Choli Lee 2 collaborations

Beth Martin 2 collaborations

Troy A McDiarmid 2 collaborations

Nicholas F Page 2 collaborations

Lea M Starita 2 collaborations

Stephan J Sanders 2 collaborations

Nadav Ahituv 2 collaborations

Beth K Martin 2 collaborations

Jean-Benoît Lalanne 2 collaborations

Xiaoyi Li 2 collaborations

Dirk Schübeler 2 collaborations

José L McFaline-Figueroa 2 collaborations

Sanjay Srivatsan 2 collaborations

Molly Gasperini 2 collaborations

Dana L Jackson 2 collaborations

Lauren Saunders 2 collaborations

Paul Lazarchuck 2 collaborations

Sarai Alvarez 2 collaborations

Raymond J Monnat 2 collaborations

Junhong Choi 1 collaboration

Wei Chen 1 collaboration

Anna Minkina 1 collaboration

Nobuhiko Hamazaki 1 collaboration

Jean-Beno Æt Lalanne 1 collaboration

Stefan Butz 1 collaboration

Nina Schmolka 1 collaboration

Ino D Karemaker 1 collaboration

Rodrigo Villaseñor 1 collaboration

Isabel Schwarz 1 collaboration

Esther C H Uijttewaal 1 collaboration

Julian Jude 1 collaboration

Florian Lienert 1 collaboration

Arnaud R Krebs 1 collaboration

Nathalie P de Wagenaar 1 collaboration

Xue Bao 1 collaboration

Johannes Zuber 1 collaboration

Ulrich Elling 1 collaboration

Tuncay Baubec 1 collaboration

Tony Li 1 collaboration

Jenny Lord 1 collaboration

Carolina J Oquendo 1 collaboration

Htoo A Wai 1 collaboration

John G Holloway 1 collaboration

Alexandra Martin-Geary 1 collaboration

Alexander Jm Blakes 1 collaboration

Elena Arciero 1 collaboration

Anne-Marie Childs 1 collaboration

Karen Low 1 collaboration

Julia Rankin 1 collaboration

None None 1 collaboration

Diana Baralle 1 collaboration

Hilary C Martin 1 collaboration

Nicola Whiffin 1 collaboration

Junyue Cao 1 collaboration

Diana R O'Day 1 collaboration

Hannah A Pliner 1 collaboration

Kimberly A Aldinger 1 collaboration

Dmitry Pokholok 1 collaboration

Fan Zhang 1 collaboration

Jennifer H Milbank 1 collaboration

Michael A Zager 1 collaboration

Ian A Glass 1 collaboration

Frank J Steemers 1 collaboration

Dan Doherty 1 collaboration

Darren A Cusanovich 1 collaboration

Sebastian Kaluscha 1 collaboration

Christiane Wirbelauer 1 collaboration

Michael B Stadler 1 collaboration

Sevi Durdu 1 collaboration

Lukas Burger 1 collaboration