Shinya Miyagishima

Affiliations

Department of Gene Function and Phenomics, National Institute of Genetics, Mishima 411-8540, Japan.

Publications (30)

Perivascular Epithelial Cell Tumor of the Pancreas Diagnosed Preoperatively by Endoscopic Ultrasound-guided Fine-needle Aspiration.

Internal medicine (Tokyo, Japan)

Avec: Konomu Uno , Shuya Shimizu , Katsumi Hayashi , Tomonori Yamada , Atsunori Kusakabe , Hiroshi Kanie , Yusuke Mizuno , Kazuhiro Nagao , Hiromichi Araki , Tadashi Toyohara , Takeo Kanda , Kohei Okayama , Takanori Suzuki , Shun Miyagishima , Takashi Watanabe , Takahiro Nakazawa

Inventory and Evolution of Mitochondrion-localized Family A DNA Polymerases in Euglenozoa.

Pathogens (Basel, Switzerland)

Avec: Ryo Harada , Yoshihisa Hirakawa , Akinori Yabuki , Yuichiro Kashiyama , Moe Maruyama , Ryo Onuma , Petr Soukal , Shinya Miyagishima , Vladimír Hampl , Goro Tanifuji , Yuji Inagaki

Efficient open cultivation of cyanidialean red algae in acidified seawater.

Scientific reports

Avec: Shunsuke Hirooka , Reiko Tomita , Takayuki Fujiwara , Mio Ohnuma , Haruko Kuroiwa , Tsuneyoshi Kuroiwa , Shin-Ya Miyagishima

Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation.

Scientific reports

Avec: Shota Yamashita , Kayoko Yamamoto , Ryo Matsuzaki , Shigekatsu Suzuki , Haruyo Yamaguchi , Shunsuke Hirooka , Yohei Minakuchi , Shin-Ya Miyagishima , Masanobu Kawachi , Atsushi Toyoda , Hisayoshi Nozaki

The Unicellular Red Alga Cyanidioschyzon merolae-The Simplest Model of a Photosynthetic Eukaryote.

Plant & cell physiology

Avec: Shin-Ya Miyagishima , Kan Tanaka

Taming the perils of photosynthesis by eukaryotes: constraints on endosymbiotic evolution in aquatic ecosystems.

Communications biology

Avec: Shin-Ya Miyagishima

Relationship between Cell Cycle and Diel Transcriptomic Changes in Metabolism in a Unicellular Red Alga.

Plant physiology

Avec: Takayuki Fujiwara , Shunsuke Hirooka , Ryudo Ohbayashi , Ryo Onuma , Shin-Ya Miyagishima

Evolutionary Changes in DnaA-Dependent Chromosomal Replication in Cyanobacteria.

Frontiers in microbiology

Avec: Ryudo Ohbayashi , Shunsuke Hirooka , Ryo Onuma , Yu Kanesaki , Yuu Hirose , Yusuke Kobayashi , Takayuki Fujiwara , Chikara Furusawa , Shin-Ya Miyagishima

Development of temporal and spatial characteristics of anticipatory postural adjustments during gait initiation in children aged 3-10 years.

Human movement science

Avec: Hiroki Mani , Saori Miyagishima , Naoki Kozuka , Kenta Takeda , Kenji Taneda , Takahiro Inoue , Yui Sato , Tadayoshi Asaka

Holliday Junction Resolvase MOC1 Maintains Plastid and Mitochondrial Genome Integrity in Algae and Bryophytes.

Plant physiology

Avec: Yusuke Kobayashi , Masaki Odahara , Yasuhiko Sekine , Takashi Hamaji , Sumire Fujiwara , Yoshiki Nishimura , Shin-Ya Miyagishima

Developmental changes in straight gait in childhood.

PloS one

Avec: Saori Miyagishima , Hiroki Mani , Yui Sato , Takahiro Inoue , Tadayoshi Asaka , Naoki Kozuka

Dynamin-Like Protein B of

Cells

Avec: Koushiro Fujimoto , Masahito Tanaka , A Y K Md Masud Rana , Md Golam Sarowar Jahan , Go Itoh , Masatsune Tsujioka , Taro Q P Uyeda , Shin-Ya Miyagishima , Shigehiko Yumura

Day/Night Separation of Oxygenic Energy Metabolism and Nuclear DNA Replication in the Unicellular Red Alga

mBio

Avec: Shin-Ya Miyagishima , Atsuko Era , Tomohisa Hasunuma , Mami Matsuda , Shunsuke Hirooka , Nobuko Sumiya , Akihiko Kondo , Takayuki Fujiwara

Development of the Relationships Among Dynamic Balance Control, Inter-limb Coordination, and Torso Coordination During Gait in Children Aged 3-10 Years.

Frontiers in human neuroscience

Avec: Hiroki Mani , Saori Miyagishima , Naoki Kozuka , Takahiro Inoue , Naoya Hasegawa , Tadayoshi Asaka

Development of a rapamycin-inducible protein-knockdown system in the unicellular red alga Cyanidioschyzon merolae.

Plant physiology

Avec: Takayuki Fujiwara , Shunsuke Hirooka , Shota Yamashita , Fumi Yagisawa , Shin-Ya Miyagishima

Life cycle and functional genomics of the unicellular red alga

Proceedings of the National Academy of Sciences of the United States of America

Avec: Shunsuke Hirooka , Takeshi Itabashi , Takako M Ichinose , Ryo Onuma , Takayuki Fujiwara , Shota Yamashita , Lin Wei Jong , Reiko Tomita , Atsuko H Iwane , Shin-Ya Miyagishima

ESCRT Machinery Mediates Cytokinetic Abscission in the Unicellular Red Alga

Frontiers in cell and developmental biology

Avec: Fumi Yagisawa , Takayuki Fujiwara , Tokiaki Takemura , Yuki Kobayashi , Nobuko Sumiya , Shin-Ya Miyagishima , Soichi Nakamura , Yuuta Imoto , Osami Misumi , Kan Tanaka , Haruko Kuroiwa , Tsuneyoshi Kuroiwa

Coordination of Polyploid Chromosome Replication with Cell Size and Growth in a Cyanobacterium.

mBio

Avec: Ryudo Ohbayashi , Ai Nakamachi , Tetsuhiro S Hatakeyama , Satoru Watanabe , Yu Kanesaki , Taku Chibazakura , Hirofumi Yoshikawa , Shin-Ya Miyagishima

Development of postural control during single-leg standing in children aged 3-10 years.

Gait & posture

Avec: Hiroki Mani , Saori Miyagishima , Naoki Kozuka , Yuya Kodama , Kenta Takeda , Tadayoshi Asaka

Responses of unicellular predators to cope with the phototoxicity of photosynthetic prey.

Nature communications

Avec: Akihiro Uzuka , Yusuke Kobayashi , Ryo Onuma , Shunsuke Hirooka , Yu Kanesaki , Hirofumi Yoshikawa , Takayuki Fujiwara , Shin-Ya Miyagishima

A cotransformation system of the unicellular red alga Cyanidioschyzon merolae with blasticidin S deaminase and chloramphenicol acetyltransferase selectable markers.

BMC plant biology

Avec: Takayuki Fujiwara , Shunsuke Hirooka , Shin-Ya Miyagishima

The Polycomb repressive complex 2 deposits H3K27me3 and represses transposable elements in a broad range of eukaryotes.

Current biology : CB

Avec: Tetsuya Hisanaga , Facundo Romani , Shuangyang Wu , Teresa Kowar , Yue Wu , Ruth Lintermann , Arie Fridrich , Chung Hyun Cho , Timothée Chaumier , Bhagyshree Jamge , Sean A Montgomery , Elin Axelsson , Svetlana Akimcheva , Tom Dierschke , John L Bowman , Takayuki Fujiwara , Shunsuke Hirooka , Shin-Ya Miyagishima , Liam Dolan , Leila Tirichine , Daniel Schubert , Frédéric Berger

The structure of PSI-LHCI from

Proceedings of the National Academy of Sciences of the United States of America

Avec: Koji Kato , Tasuku Hamaguchi , Minoru Kumazawa , Yoshiki Nakajima , Kentaro Ifuku , Shunsuke Hirooka , Yuu Hirose , Shin-Ya Miyagishima , Takehiro Suzuki , Keisuke Kawakami , Naoshi Dohmae , Koji Yonekura , Jian-Ren Shen , Ryo Nagao

From dusk till dawn: cell cycle progression in the red seaweed

iScience

Avec: JunMo Lee , Shin-Ya Miyagishima , Debashish Bhattacharya , Hwan Su Yoon

Changes in the transcriptome, ploidy, and optimal light intensity of a cryptomonad upon integration into a kleptoplastic dinoflagellate.

The ISME journal

Avec: Ryo Onuma , Shunsuke Hirooka , Yu Kanesaki , Takayuki Fujiwara , Hirofumi Yoshikawa , Shin-Ya Miyagishima

Integration of a

Plant direct

Avec: Takayuki Fujiwara , Shunsuke Hirooka , Mizuna Mukai , Ryudo Ohbayashi , Yu Kanesaki , Satoru Watanabe , Shin-Ya Miyagishima

Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth.

The ISME journal

Avec: Yuichiro Kashiyama , Akiko Yokoyama , Takashi Shiratori , Sebastian Hess , Fabrice Not , Charles Bachy , Andres Gutierrez-Rodriguez , Jun Kawahara , Toshinobu Suzaki , Masami Nakazawa , Takahiro Ishikawa , Moe Maruyama , Mengyun Wang , Man Chen , Yingchun Gong , Kensuke Seto , Maiko Kagami , Yoko Hamamoto , Daiske Honda , Takahiro Umetani , Akira Shihongi , Motoki Kayama , Toshiki Matsuda , Junya Taira , Akinori Yabuki , Masashi Tsuchiya , Yoshihisa Hirakawa , Akane Kawaguchi , Mami Nomura , Atsushi Nakamura , Noriaki Namba , Mitsufumi Matsumoto , Tsuyoshi Tanaka , Tomoko Yoshino , Rina Higuchi , Akihiro Yamamoto , Tadanobu Maruyama , Aika Yamaguchi , Akihiro Uzuka , Shinya Miyagishima , Goro Tanifuji , Masanobu Kawachi , Yusuke Kinoshita , Hitoshi Tamiaki

Cell size for commitment to cell division and number of successive cell divisions in cyanidialean red algae.

Protoplasma

Avec: Lin Wei Jong , Takayuki Fujiwara , Shunsuke Hirooka , Shin-Ya Miyagishima

Development of a Novel Nanoarchitecture of the Robust Photosystem I from a Volcanic Microalga

International journal of molecular sciences

Avec: Miriam Izzo , Margot Jacquet , Takayuki Fujiwara , Ersan Harputlu , Radosław Mazur , Piotr Wróbel , Tomasz Góral , C Gokhan Unlu , Kasim Ocakoglu , Shinya Miyagishima , Joanna Kargul

Genome evolution of a nonparasitic secondary heterotroph, the diatom

Science advances

Avec: Ryoma Kamikawa , Takako Mochizuki , Mika Sakamoto , Yasuhiro Tanizawa , Takuro Nakayama , Ryo Onuma , Ugo Cenci , Daniel Moog , Samuel Speak , Krisztina Sarkozi , Andrew Toseland , Cock van Oosterhout , Kaori Oyama , Misako Kato , Keitaro Kume , Motoki Kayama , Tomonori Azuma , Ken-Ichiro Ishii , Hideaki Miyashita , Bernard Henrissat , Vincent Lombard , Joe Win , Sophien Kamoun , Yuichiro Kashiyama , Shigeki Mayama , Shin-Ya Miyagishima , Goro Tanifuji , Thomas Mock , Yasukazu Nakamura

Réseau de co-auteurs

Shin-Ya Miyagishima 22 collaborations

Shunsuke Hirooka 14 collaborations

Takayuki Fujiwara 14 collaborations

Ryo Onuma 7 collaborations

Yu Kanesaki 5 collaborations

Ryudo Ohbayashi 4 collaborations

Hiroki Mani 4 collaborations

Saori Miyagishima 4 collaborations

Naoki Kozuka 4 collaborations

Tadayoshi Asaka 4 collaborations

Yuichiro Kashiyama 3 collaborations

Goro Tanifuji 3 collaborations

Shota Yamashita 3 collaborations

Yusuke Kobayashi 3 collaborations

Takahiro Inoue 3 collaborations

Hirofumi Yoshikawa 3 collaborations

Yoshihisa Hirakawa 2 collaborations

Akinori Yabuki 2 collaborations

Moe Maruyama 2 collaborations

Reiko Tomita 2 collaborations

Haruko Kuroiwa 2 collaborations

Tsuneyoshi Kuroiwa 2 collaborations

Masanobu Kawachi 2 collaborations

Kan Tanaka 2 collaborations

Yuu Hirose 2 collaborations

Kenta Takeda 2 collaborations

Yui Sato 2 collaborations

Nobuko Sumiya 2 collaborations

Fumi Yagisawa 2 collaborations

Lin Wei Jong 2 collaborations

Satoru Watanabe 2 collaborations

Akihiro Uzuka 2 collaborations

Motoki Kayama 2 collaborations

Konomu Uno 1 collaboration

Shuya Shimizu 1 collaboration

Katsumi Hayashi 1 collaboration

Tomonori Yamada 1 collaboration

Atsunori Kusakabe 1 collaboration

Hiroshi Kanie 1 collaboration

Yusuke Mizuno 1 collaboration

Kazuhiro Nagao 1 collaboration

Hiromichi Araki 1 collaboration

Tadashi Toyohara 1 collaboration

Takeo Kanda 1 collaboration

Kohei Okayama 1 collaboration

Takanori Suzuki 1 collaboration

Shun Miyagishima 1 collaboration

Takashi Watanabe 1 collaboration

Takahiro Nakazawa 1 collaboration

Ryo Harada 1 collaboration

Petr Soukal 1 collaboration

Vladimír Hampl 1 collaboration

Yuji Inagaki 1 collaboration

Mio Ohnuma 1 collaboration

Kayoko Yamamoto 1 collaboration

Ryo Matsuzaki 1 collaboration

Shigekatsu Suzuki 1 collaboration

Haruyo Yamaguchi 1 collaboration

Yohei Minakuchi 1 collaboration

Atsushi Toyoda 1 collaboration

Hisayoshi Nozaki 1 collaboration

Chikara Furusawa 1 collaboration

Kenji Taneda 1 collaboration

Masaki Odahara 1 collaboration

Yasuhiko Sekine 1 collaboration

Takashi Hamaji 1 collaboration

Sumire Fujiwara 1 collaboration

Yoshiki Nishimura 1 collaboration

Koushiro Fujimoto 1 collaboration

Masahito Tanaka 1 collaboration

A Y K Md Masud Rana 1 collaboration

Md Golam Sarowar Jahan 1 collaboration

Go Itoh 1 collaboration

Masatsune Tsujioka 1 collaboration

Taro Q P Uyeda 1 collaboration

Shigehiko Yumura 1 collaboration

Atsuko Era 1 collaboration

Tomohisa Hasunuma 1 collaboration

Mami Matsuda 1 collaboration

Akihiko Kondo 1 collaboration

Naoya Hasegawa 1 collaboration

Takeshi Itabashi 1 collaboration

Takako M Ichinose 1 collaboration

Atsuko H Iwane 1 collaboration

Tokiaki Takemura 1 collaboration

Yuki Kobayashi 1 collaboration

Soichi Nakamura 1 collaboration

Yuuta Imoto 1 collaboration

Osami Misumi 1 collaboration

Ai Nakamachi 1 collaboration

Tetsuhiro S Hatakeyama 1 collaboration

Taku Chibazakura 1 collaboration

Yuya Kodama 1 collaboration

Tetsuya Hisanaga 1 collaboration

Facundo Romani 1 collaboration

Shuangyang Wu 1 collaboration

Teresa Kowar 1 collaboration

Yue Wu 1 collaboration

Ruth Lintermann 1 collaboration

Arie Fridrich 1 collaboration

Chung Hyun Cho 1 collaboration

Timothée Chaumier 1 collaboration

Bhagyshree Jamge 1 collaboration

Sean A Montgomery 1 collaboration

Elin Axelsson 1 collaboration

Svetlana Akimcheva 1 collaboration

Tom Dierschke 1 collaboration

John L Bowman 1 collaboration

Liam Dolan 1 collaboration

Leila Tirichine 1 collaboration

Daniel Schubert 1 collaboration

Frédéric Berger 1 collaboration

Koji Kato 1 collaboration

Tasuku Hamaguchi 1 collaboration

Minoru Kumazawa 1 collaboration

Yoshiki Nakajima 1 collaboration

Kentaro Ifuku 1 collaboration

Takehiro Suzuki 1 collaboration

Keisuke Kawakami 1 collaboration

Naoshi Dohmae 1 collaboration

Koji Yonekura 1 collaboration

Jian-Ren Shen 1 collaboration

Ryo Nagao 1 collaboration

JunMo Lee 1 collaboration

Debashish Bhattacharya 1 collaboration

Hwan Su Yoon 1 collaboration

Mizuna Mukai 1 collaboration

Akiko Yokoyama 1 collaboration

Takashi Shiratori 1 collaboration

Sebastian Hess 1 collaboration

Fabrice Not 1 collaboration

Charles Bachy 1 collaboration

Andres Gutierrez-Rodriguez 1 collaboration

Jun Kawahara 1 collaboration

Toshinobu Suzaki 1 collaboration

Masami Nakazawa 1 collaboration

Takahiro Ishikawa 1 collaboration

Mengyun Wang 1 collaboration

Man Chen 1 collaboration

Yingchun Gong 1 collaboration

Kensuke Seto 1 collaboration

Maiko Kagami 1 collaboration

Yoko Hamamoto 1 collaboration

Daiske Honda 1 collaboration

Takahiro Umetani 1 collaboration

Akira Shihongi 1 collaboration

Toshiki Matsuda 1 collaboration

Junya Taira 1 collaboration

Masashi Tsuchiya 1 collaboration

Akane Kawaguchi 1 collaboration

Mami Nomura 1 collaboration

Atsushi Nakamura 1 collaboration

Noriaki Namba 1 collaboration

Mitsufumi Matsumoto 1 collaboration

Tsuyoshi Tanaka 1 collaboration

Tomoko Yoshino 1 collaboration

Rina Higuchi 1 collaboration

Akihiro Yamamoto 1 collaboration

Tadanobu Maruyama 1 collaboration

Aika Yamaguchi 1 collaboration

Yusuke Kinoshita 1 collaboration

Hitoshi Tamiaki 1 collaboration

Miriam Izzo 1 collaboration

Margot Jacquet 1 collaboration

Ersan Harputlu 1 collaboration

Radosław Mazur 1 collaboration

Piotr Wróbel 1 collaboration

Tomasz Góral 1 collaboration

C Gokhan Unlu 1 collaboration

Kasim Ocakoglu 1 collaboration

Joanna Kargul 1 collaboration

Ryoma Kamikawa 1 collaboration

Takako Mochizuki 1 collaboration

Mika Sakamoto 1 collaboration

Yasuhiro Tanizawa 1 collaboration

Takuro Nakayama 1 collaboration

Ugo Cenci 1 collaboration

Daniel Moog 1 collaboration

Samuel Speak 1 collaboration

Krisztina Sarkozi 1 collaboration

Andrew Toseland 1 collaboration

Cock van Oosterhout 1 collaboration

Kaori Oyama 1 collaboration

Misako Kato 1 collaboration

Keitaro Kume 1 collaboration

Tomonori Azuma 1 collaboration

Ken-Ichiro Ishii 1 collaboration

Hideaki Miyashita 1 collaboration

Bernard Henrissat 1 collaboration

Vincent Lombard 1 collaboration

Joe Win 1 collaboration

Sophien Kamoun 1 collaboration

Shigeki Mayama 1 collaboration

Thomas Mock 1 collaboration

Yasukazu Nakamura 1 collaboration