Søren Alexandersen

Publications (18)

Metagenomic characterisation of additional and novel avian viruses from Australian wild ducks.

Scientific reports

Avec: Jessy Vibin , Anthony Chamings , Marcel Klaassen , Soren Alexandersen

Novel Human Parechovirus 3 Diversity, Recombination, and Clinical Impact Across 7 Years: An Australian Story.

The Journal of infectious diseases

Avec: Seweryn Bialasiewicz , Meryta May , Sarah Tozer , Rebecca Day , Anne Bernard , Julian Zaugg , Kyana Gartrell , Soren Alexandersen , Anthony Chamings , Claire Y T Wang , Julia Clark , Keith Grimwood , Claire Heney , Luregn J Schlapbach , Robert S Ware , David Speers , Ross M Andrews , Stephen Lambert

Detection of a Reassortant H9N2 Avian Influenza Virus with Intercontinental Gene Segments in a Resident Australian Chestnut Teal.

Viruses

Avec: Tarka Raj Bhatta , Anthony Chamings , Jessy Vibin , Marcel Klaassen , Soren Alexandersen

Epidemic and Inter-epidemic Burden of Pediatric Human Parechovirus Infection in New South Wales, Australia, 2017-2018.

The Pediatric infectious disease journal

Avec: Ameneh Khatami , Rebecca Burrell , Brendan J McMullan , William Rawlinson , Rodney C Givney , Jen Kok , Soren Alexandersen , Cheryl A Jones , Kristine K Macartney , Philip N Britton

Infection Dynamics of Swine Influenza Virus in a Danish Pig Herd Reveals Recurrent Infections with Different Variants of the H1N2 Swine Influenza A Virus Subtype.

Viruses

Avec: Tarka Raj Bhatta , Pia Ryt-Hansen , Jens Peter Nielsen , Lars Erik Larsen , Inge Larsen , Anthony Chamings , Nicole B Goecke , Soren Alexandersen

Exploring the Cause of Diarrhoea and Poor Growth in 8-11-Week-Old Pigs from an Australian Pig Herd Using Metagenomic Sequencing.

Viruses

Avec: Tarka Raj Bhatta , Anthony Chamings , Soren Alexandersen

SARS-CoV-2 genomic and subgenomic RNAs in diagnostic samples are not an indicator of active replication.

Nature communications

Avec: Soren Alexandersen , Anthony Chamings , Tarka Raj Bhatta

Evolutionary analysis of human parechovirus type 3 and clinical outcomes of infection during the 2017-18 Australian epidemic.

Scientific reports

Avec: Anthony Chamings , Julian Druce , Leon Caly , Yano Yoga , Philip N Britton , Kristine K Macartney , Soren Alexandersen

An Emerging Human Parechovirus Type 5 Causing Sepsis-Like Illness in Infants in Australia.

Viruses

Avec: Anthony Chamings , Kwee Chin Liew , Emily Reid , Eugene Athan , Amy Raditsis , Peter Vuillermin , Yano Yoga , Leon Caly , Julian Druce , Soren Alexandersen

Diverse Bacterial Resistance Genes Detected in Fecal Samples From Clinically Healthy Women and Infants in Australia-A Descriptive Pilot Study.

Frontiers in microbiology

Avec: Vanina Guernier-Cambert , Anthony Chamings , Fiona Collier , Soren Alexandersen

Ability to detect antibodies to beak and feather disease virus in blood on filter paper decreases with duration of storage.

PeerJ

Avec: Berta Blanch-Lázaro , Raoul F H Ribot , Mathew L Berg , Soren Alexandersen , Andrew T D Bennett

Metagenomic characterisation of avian parvoviruses and picornaviruses from Australian wild ducks.

Scientific reports

Avec: Jessy Vibin , Anthony Chamings , Marcel Klaassen , Tarka Raj Bhatta , Soren Alexandersen

Detection and characterisation of canine astrovirus, canine parvovirus and canine papillomavirus in puppies using next generation sequencing.

Scientific reports

Avec: Tarka Raj Bhatta , Anthony Chamings , Jessy Vibin , Soren Alexandersen

Genomic Epidemiology of Salmonid Alphavirus in Norwegian Aquaculture Reveals Recent Subtype-2 Transmission Dynamics and Novel Subtype-3 Lineages.

Viruses

Avec: Daniel J Macqueen , Oliver Eve , Manu Kumar Gundappa , Rose Ruiz Daniels , Michael D Gallagher , Svein Alexandersen , Marius Karlsen

Severe Human Case of Zoonotic Infection with Swine-Origin Influenza A Virus, Denmark, 2021.

Emerging infectious diseases

Avec: Klara M Andersen , Lasse S Vestergaard , Jakob N Nissen , Sophie J George , Pia Ryt-Hansen , Charlotte K Hjulsager , Jesper S Krog , Marianne N Skov , Søren Alexandersen , Lars E Larsen , Ramona Trebbien

Variations in the persistence of 5'-end genomic and subgenomic SARS-CoV-2 RNAs in wastewater from aircraft, airports and wastewater treatment plants.

Heliyon

Avec: Man-Hung Eric Tang , Marc Bennedbaek , Vithiagaran Gunalan , Amanda Gammelby Qvesel , Theis Hass Thorsen , Nicolai Balle Larsen , Lasse Dam Rasmussen , Lene Wulff Krogsgaard , Morten Rasmussen , Marc Stegger , Soren Alexandersen

Comparative subgenomic mRNA profiles of SARS-CoV-2 Alpha, Delta and Omicron BA.1, BA.2 and BA.5 sub-lineages using Danish COVID-19 genomic surveillance data.

EBioMedicine

Avec: Man-Hung Eric Tang , Kim Lee Ng , Sofie Marie Edslev , Kirsten Ellegaard , Auteur inconnu , Marc Stegger , Soren Alexandersen

Beak and feather disease virus (BFDV) persists in tissues of asymptomatic wild Crimson Rosellas.

Communications biology

Avec: Berta Blanch-Lázaro , Anthony Chamings , Raoul F H Ribot , Tarka Raj Bhatta , Mathew L Berg , Soren Alexandersen , Andrew T D Bennett

Réseau de co-auteurs

Soren Alexandersen 16 collaborations

Anthony Chamings 12 collaborations

Tarka Raj Bhatta 7 collaborations

Jessy Vibin 4 collaborations

Marcel Klaassen 3 collaborations

Kristine K Macartney 2 collaborations

Philip N Britton 2 collaborations

Pia Ryt-Hansen 2 collaborations

Julian Druce 2 collaborations

Leon Caly 2 collaborations

Yano Yoga 2 collaborations

Berta Blanch-Lázaro 2 collaborations

Raoul F H Ribot 2 collaborations

Mathew L Berg 2 collaborations

Andrew T D Bennett 2 collaborations

Man-Hung Eric Tang 2 collaborations

Marc Stegger 2 collaborations

Seweryn Bialasiewicz 1 collaboration

Meryta May 1 collaboration

Sarah Tozer 1 collaboration

Rebecca Day 1 collaboration

Anne Bernard 1 collaboration

Julian Zaugg 1 collaboration

Kyana Gartrell 1 collaboration

Claire Y T Wang 1 collaboration

Julia Clark 1 collaboration

Keith Grimwood 1 collaboration

Claire Heney 1 collaboration

Luregn J Schlapbach 1 collaboration

Robert S Ware 1 collaboration

David Speers 1 collaboration

Ross M Andrews 1 collaboration

Stephen Lambert 1 collaboration

Ameneh Khatami 1 collaboration

Rebecca Burrell 1 collaboration

Brendan J McMullan 1 collaboration

William Rawlinson 1 collaboration

Rodney C Givney 1 collaboration

Jen Kok 1 collaboration

Cheryl A Jones 1 collaboration

Jens Peter Nielsen 1 collaboration

Lars Erik Larsen 1 collaboration

Inge Larsen 1 collaboration

Nicole B Goecke 1 collaboration

Kwee Chin Liew 1 collaboration

Emily Reid 1 collaboration

Eugene Athan 1 collaboration

Amy Raditsis 1 collaboration

Peter Vuillermin 1 collaboration

Vanina Guernier-Cambert 1 collaboration

Fiona Collier 1 collaboration

Daniel J Macqueen 1 collaboration

Oliver Eve 1 collaboration

Manu Kumar Gundappa 1 collaboration

Rose Ruiz Daniels 1 collaboration

Michael D Gallagher 1 collaboration

Svein Alexandersen 1 collaboration

Marius Karlsen 1 collaboration

Klara M Andersen 1 collaboration

Lasse S Vestergaard 1 collaboration

Jakob N Nissen 1 collaboration

Sophie J George 1 collaboration

Charlotte K Hjulsager 1 collaboration

Jesper S Krog 1 collaboration

Marianne N Skov 1 collaboration

Lars E Larsen 1 collaboration

Ramona Trebbien 1 collaboration

Marc Bennedbaek 1 collaboration

Vithiagaran Gunalan 1 collaboration

Amanda Gammelby Qvesel 1 collaboration

Theis Hass Thorsen 1 collaboration

Nicolai Balle Larsen 1 collaboration

Lasse Dam Rasmussen 1 collaboration

Lene Wulff Krogsgaard 1 collaboration

Morten Rasmussen 1 collaboration

Kim Lee Ng 1 collaboration

Sofie Marie Edslev 1 collaboration

Kirsten Ellegaard 1 collaboration

None None 1 collaboration