Robert A McDougal

Affiliations

Department of Neuroscience, Yale University, 333 Cedar Street, PO Box 208001, New Haven, CT, 06520-8001, USA. robert.mcdougal@yale.edu.
Yale Center for Medical Informatics, Yale University, 300 George Street, New Haven, CT, 06510, USA. robert.mcdougal@yale.edu.

ORCID: 0000-0001-6394-3127

Publications (12)

Automated Metadata Suggestion During Repository Submission.

Neuroinformatics

Avec: Robert A McDougal , Isha Dalal , Thomas M Morse , Gordon M Shepherd

Automating literature screening and curation with applications to computational neuroscience.

Journal of the American Medical Informatics Association : JAMIA

Avec: Ziqing Ji , Siyan Guo , Yujie Qiao , Robert A McDougal

Identifying Game-Based Digital Biomarkers of Cognitive Risk for Adolescent Substance Misuse: Protocol for a Proof-of-Concept Study.

JMIR research protocols

Avec: Kammarauche Aneni , Ching-Hua Chen , Jenny Meyer , Youngsun T Cho , Zachary Chase Lipton , Saatvik Kher , Megan G Jiao , Isabella Gomati de la Vega , Feza Anaise Umutoni , Robert A McDougal , Lynn E Fiellin

Human Neocortical Neurosolver (HNN), a new software tool for interpreting the cellular and network origin of human MEG/EEG data.

eLife

Avec: Samuel A Neymotin , Dylan S Daniels , Blake Caldwell , Robert A McDougal , Nicholas T Carnevale , Mainak Jas , Christopher I Moore , Michael L Hines , Matti Hämäläinen , Stephanie R Jones

Parallel Stochastic Discrete Event Simulation of Calcium Dynamics in Neuron.

IEEE/ACM transactions on computational biology and bioinformatics

Avec: Mohammad Nazrul Ishlam Patoary , Carl Tropper , Robert A McDougal , Zhongwei Lin , William W Lytton

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits.

Neuron

Avec: Padraig Gleeson , Matteo Cantarelli , Boris Marin , Adrian Quintana , Matt Earnshaw , Sadra Sadeh , Eugenio Piasini , Justas Birgiolas , Robert C Cannon , N Alex Cayco-Gajic , Sharon Crook , Andrew P Davison , Salvador Dura-Bernal , András Ecker , Michael L Hines , Giovanni Idili , Frederic Lanore , Stephen D Larson , William W Lytton , Amitava Majumdar , Robert A McDougal , Subhashini Sivagnanam , Sergio Solinas , Rokas Stanislovas , Sacha J van Albada , Werner van Geit , R Angus Silver

Modernizing the NEURON Simulator for Sustainability, Portability, and Performance.

Frontiers in neuroinformatics

Avec: Omar Awile , Pramod Kumbhar , Nicolas Cornu , Salvador Dura-Bernal , James Gonzalo King , Olli Lupton , Ioannis Magkanaris , Robert A McDougal , Adam J H Newton , Fernando Pereira , Alexandru Săvulescu , Nicholas T Carnevale , William W Lytton , Michael L Hines , Felix Schürmann

Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks.

Frontiers in neuroinformatics

Avec: Robert A McDougal , Cameron Conte , Lia Eggleston , Adam J H Newton , Hana Galijasevic

PLD3 affects axonal spheroids and network defects in Alzheimer's disease.

Nature

Avec: Peng Yuan , Mengyang Zhang , Lei Tong , Thomas M Morse , Robert A McDougal , Hui Ding , Diane Chan , Yifei Cai , Jaime Grutzendler

A pipeline for the retrieval and extraction of domain-specific information with application to COVID-19 immune signatures.

BMC bioinformatics

Avec: Adam J H Newton , David Chartash , Steven H Kleinstein , Robert A McDougal

Reproducibility of biophysical in silico neuron states and spikes from event-based partial histories.

PLoS computational biology

Avec: Evan Cudone , Amelia M Lower , Robert A McDougal

NetPyNE, a tool for data-driven multiscale modeling of brain circuits.

eLife

Avec: Salvador Dura-Bernal , Benjamin A Suter , Padraig Gleeson , Matteo Cantarelli , Adrian Quintana , Facundo Rodriguez , David J Kedziora , George L Chadderdon , Cliff C Kerr , Samuel A Neymotin , Robert A McDougal , Michael Hines , Gordon Mg Shepherd , William W Lytton

Réseau de co-auteurs

William W Lytton 4 collaborations

Michael L Hines 3 collaborations

Salvador Dura-Bernal 3 collaborations

Adam J H Newton 3 collaborations

Thomas M Morse 2 collaborations

Samuel A Neymotin 2 collaborations

Nicholas T Carnevale 2 collaborations

Padraig Gleeson 2 collaborations

Matteo Cantarelli 2 collaborations

Adrian Quintana 2 collaborations

Isha Dalal 1 collaboration

Gordon M Shepherd 1 collaboration

Ziqing Ji 1 collaboration

Siyan Guo 1 collaboration

Yujie Qiao 1 collaboration

Kammarauche Aneni 1 collaboration

Ching-Hua Chen 1 collaboration

Jenny Meyer 1 collaboration

Youngsun T Cho 1 collaboration

Zachary Chase Lipton 1 collaboration

Saatvik Kher 1 collaboration

Megan G Jiao 1 collaboration

Isabella Gomati de la Vega 1 collaboration

Feza Anaise Umutoni 1 collaboration

Lynn E Fiellin 1 collaboration

Dylan S Daniels 1 collaboration

Blake Caldwell 1 collaboration

Mainak Jas 1 collaboration

Christopher I Moore 1 collaboration

Matti Hämäläinen 1 collaboration

Stephanie R Jones 1 collaboration

Mohammad Nazrul Ishlam Patoary 1 collaboration

Carl Tropper 1 collaboration

Zhongwei Lin 1 collaboration

Boris Marin 1 collaboration

Matt Earnshaw 1 collaboration

Sadra Sadeh 1 collaboration

Eugenio Piasini 1 collaboration

Justas Birgiolas 1 collaboration

Robert C Cannon 1 collaboration

N Alex Cayco-Gajic 1 collaboration

Sharon Crook 1 collaboration

Andrew P Davison 1 collaboration

András Ecker 1 collaboration

Giovanni Idili 1 collaboration

Frederic Lanore 1 collaboration

Stephen D Larson 1 collaboration

Amitava Majumdar 1 collaboration

Subhashini Sivagnanam 1 collaboration

Sergio Solinas 1 collaboration

Rokas Stanislovas 1 collaboration

Sacha J van Albada 1 collaboration

Werner van Geit 1 collaboration

R Angus Silver 1 collaboration

Omar Awile 1 collaboration

Pramod Kumbhar 1 collaboration

Nicolas Cornu 1 collaboration

James Gonzalo King 1 collaboration

Olli Lupton 1 collaboration

Ioannis Magkanaris 1 collaboration

Fernando Pereira 1 collaboration

Alexandru Săvulescu 1 collaboration

Felix Schürmann 1 collaboration

Cameron Conte 1 collaboration

Lia Eggleston 1 collaboration

Hana Galijasevic 1 collaboration

Peng Yuan 1 collaboration

Mengyang Zhang 1 collaboration

Lei Tong 1 collaboration

Hui Ding 1 collaboration

Diane Chan 1 collaboration

Yifei Cai 1 collaboration

Jaime Grutzendler 1 collaboration

David Chartash 1 collaboration

Steven H Kleinstein 1 collaboration

Evan Cudone 1 collaboration

Amelia M Lower 1 collaboration

Benjamin A Suter 1 collaboration

Facundo Rodriguez 1 collaboration

David J Kedziora 1 collaboration

George L Chadderdon 1 collaboration

Cliff C Kerr 1 collaboration

Michael Hines 1 collaboration

Gordon Mg Shepherd 1 collaboration