Ricardo Wurmus

Affiliations

Berlin Institute for Medical Systems Biology, Max-Delbrück-Center for Molecular Medicine, 13125, Berlin, Germany.

Publications (6)

Global identification of functional microRNA-mRNA interactions in Drosophila.

Nature communications

Avec: Hans-Hermann Wessels , Svetlana Lebedeva , Antje Hirsekorn , Ricardo Wurmus , Altuna Akalin , Neelanjan Mukherjee , Uwe Ohler

HOT or not: examining the basis of high-occupancy target regions.

Nucleic acids research

Avec: Katarzyna Wreczycka , Vedran Franke , Bora Uyar , Ricardo Wurmus , Selman Bulut , Baris Tursun , Altuna Akalin

Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling.

Genome biology

Avec: Aslıhan Karabacak Calviello , Antje Hirsekorn , Ricardo Wurmus , Dilmurat Yusuf , Uwe Ohler

Scalable Workflows and Reproducible Data Analysis for Genomics.

Methods in molecular biology (Clifton, N.J.)

Avec: Francesco Strozzi , Roel Janssen , Ricardo Wurmus , Michael R Crusoe , George Githinji , Paolo Di Tommaso , Dominique Belhachemi , Steffen Möller , Geert Smant , Joep de Ligt , Pjotr Prins

SARS-CoV-2 infection dynamics revealed by wastewater sequencing analysis and deconvolution.

The Science of the total environment

Avec: Vic-Fabienne Schumann , Rafael Ricardo de Castro Cuadrat , Emanuel Wyler , Ricardo Wurmus , Aylina Deter , Claudia Quedenau , Jan Dohmen , Miriam Faxel , Tatiana Borodina , Alexander Blume , Jonas Freimuth , Martin Meixner , José Horacio Grau , Karsten Liere , Thomas Hackenbeck , Frederik Zietzschmann , Regina Gnirss , Uta Böckelmann , Bora Uyar , Vedran Franke , Niclas Barke , Janine Altmüller , Nikolaus Rajewsky , Markus Landthaler , Altuna Akalin

Spatiotemporal, optogenetic control of gene expression in organoids.

Nature methods

Avec: Ivano Legnini , Lisa Emmenegger , Alessandra Zappulo , Agnieszka Rybak-Wolf , Ricardo Wurmus , Anna Oliveras Martinez , Cledi Cerda Jara , Anastasiya Boltengagen , Talé Hessler , Guido Mastrobuoni , Stefan Kempa , Robert Zinzen , Andrew Woehler , Nikolaus Rajewsky

Réseau de co-auteurs

Altuna Akalin 3 collaborations

Antje Hirsekorn 2 collaborations

Uwe Ohler 2 collaborations

Vedran Franke 2 collaborations

Bora Uyar 2 collaborations

Nikolaus Rajewsky 2 collaborations

Hans-Hermann Wessels 1 collaboration

Svetlana Lebedeva 1 collaboration

Neelanjan Mukherjee 1 collaboration

Katarzyna Wreczycka 1 collaboration

Selman Bulut 1 collaboration

Baris Tursun 1 collaboration

Aslıhan Karabacak Calviello 1 collaboration

Dilmurat Yusuf 1 collaboration

Francesco Strozzi 1 collaboration

Roel Janssen 1 collaboration

Michael R Crusoe 1 collaboration

George Githinji 1 collaboration

Paolo Di Tommaso 1 collaboration

Dominique Belhachemi 1 collaboration

Steffen Möller 1 collaboration

Geert Smant 1 collaboration

Joep de Ligt 1 collaboration

Pjotr Prins 1 collaboration

Vic-Fabienne Schumann 1 collaboration

Rafael Ricardo de Castro Cuadrat 1 collaboration

Emanuel Wyler 1 collaboration

Aylina Deter 1 collaboration

Claudia Quedenau 1 collaboration

Jan Dohmen 1 collaboration

Miriam Faxel 1 collaboration

Tatiana Borodina 1 collaboration

Alexander Blume 1 collaboration

Jonas Freimuth 1 collaboration

Martin Meixner 1 collaboration

José Horacio Grau 1 collaboration

Karsten Liere 1 collaboration

Thomas Hackenbeck 1 collaboration

Frederik Zietzschmann 1 collaboration

Regina Gnirss 1 collaboration

Uta Böckelmann 1 collaboration

Niclas Barke 1 collaboration

Janine Altmüller 1 collaboration

Markus Landthaler 1 collaboration

Ivano Legnini 1 collaboration

Lisa Emmenegger 1 collaboration

Alessandra Zappulo 1 collaboration

Agnieszka Rybak-Wolf 1 collaboration

Anna Oliveras Martinez 1 collaboration

Cledi Cerda Jara 1 collaboration

Anastasiya Boltengagen 1 collaboration

Talé Hessler 1 collaboration

Guido Mastrobuoni 1 collaboration

Stefan Kempa 1 collaboration

Robert Zinzen 1 collaboration

Andrew Woehler 1 collaboration