Raul Aguirre-Gamboa

Affiliations

Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.

ORCID: http://orcid.org/0000-0003-2505-3574

Publications (19)

ER stress and UPR activation in glioblastoma: identification of a noncanonical PERK mechanism regulating GBM stem cells through SOX2 modulation.

Cell death & disease

Avec: Natalia M Peñaranda-Fajardo , Coby Meijer , Yuanke Liang , Bianca M Dijkstra , Raul Aguirre-Gamboa , Wilfred F A den Dunnen , Frank A E Kruyt

Inflammatory Protein Profiles in Plasma of Candidaemia Patients and the Contribution of Host Genetics to Their Variability.

Frontiers in immunology

Avec: Vasiliki Matzaraki , Kieu T T Le , Martin Jaeger , Raúl Aguirre-Gamboa , Melissa D Johnson , Serena Sanna , Diletta Rosati , Lude Franke , Alexandra Zhernakova , Jingyuan Fu , Sebo Withoff , Iris Jonkers , Yang Li , Leo A B Joosten , Mihai G Netea , Cisca Wijmenga , Vinod Kumar

Epithelial IFNγ signalling and compartmentalized antigen presentation orchestrate gut immunity.

Nature

Avec: Ankit Malik , Deepika Sharma , Raúl Aguirre-Gamboa , Shaina McGrath , Sarah Zabala , Christopher Weber , Bana Jabri

A Genome-Wide Functional Genomics Approach Identifies Susceptibility Pathways to Fungal Bloodstream Infection in Humans.

The Journal of infectious diseases

Avec: Martin Jaeger , Vasiliki Matzaraki , Raúl Aguirre-Gamboa , Mark S Gresnigt , Xiaojing Chu , Melissa D Johnson , Marije Oosting , Sanne P Smeekens , Sebo Withoff , Iris Jonkers , John R Perfect , Frank L van de Veerdonk , Bart-Jan Kullberg , Leo A B Joosten , Yang Li , Cisca Wijmenga , Mihai G Netea , Vinod Kumar

Genome-Wide Association Study Identifies Novel Colony Stimulating Factor 1 Locus Conferring Susceptibility to Cryptococcosis in Human Immunodeficiency Virus-Infected South Africans.

Open forum infectious diseases

Avec: Shichina Kannambath , Joseph N Jarvis , Rachel M Wake , Nicky Longley , Angela Loyse , Vicky Matzaraki , Raúl Aguirre-Gamboa , Cisca Wijmenga , Ronan Doyle , Maria Paximadis , Caroline T Tiemessen , Vinod Kumar , Alan Pittman , Graeme Meintjes , Thomas S Harrison , Mihai G Netea , Tihana Bicanic

GATA4 controls regionalization of tissue immunity and commensal-driven immunopathology.

Immunity

Avec: Zachary M Earley , Wioletta Lisicka , Joseph J Sifakis , Raúl Aguirre-Gamboa , Anita Kowalczyk , Jacob T Barlow , Dustin G Shaw , Valentina Discepolo , Ineke L Tan , Saideep Gona , Jordan D Ernest , Polly Matzinger , Luis B Barreiro , Andrey Morgun , Albert Bendelac , Rustem F Ismagilov , Natalia Shulzhenko , Samantha J Riesenfeld , Bana Jabri

Sex-Specific Regulation of Inflammation and Metabolic Syndrome in Obesity.

Arteriosclerosis, thrombosis, and vascular biology

Avec: Rob Ter Horst , Inge C L van den Munckhof , Kiki Schraa , Raul Aguirre-Gamboa , Martin Jaeger , Sanne P Smeekens , Tessa Brand , Heidi Lemmers , Helga Dijkstra , Tessel E Galesloot , Jacqueline de Graaf , Ramnik J Xavier , Yang Li , Leo A B Joosten , Joost H W Rutten , Mihai G Netea , Niels P Riksen

Seasonal and Nonseasonal Longitudinal Variation of Immune Function.

Journal of immunology (Baltimore, Md. : 1950)

Avec: Rob Ter Horst , Martin Jaeger , Lisa van de Wijer , Wouter A van der Heijden , Anna M W Janssen , Sanne P Smeekens , Michelle A E Brouwer , Bram van Cranenbroek , Raul Aguirre-Gamboa , Romana T Netea-Maier , Antonius E van Herwaarden , Heidi Lemmers , Helga Dijkstra , Irma Joosten , Hans Koenen , Mihai G Netea , Leo A B Joosten

Antigen-driven colonic inflammation is associated with development of dysplasia in primary sclerosing cholangitis.

Nature medicine

Avec: Dustin G Shaw , Raúl Aguirre-Gamboa , Marcos C Vieira , Saideep Gona , Nicholas DiNardi , Anni Wang , Anne Dumaine , Jody Gelderloos-Arends , Zachary M Earley , Katherine R Meckel , Cezary Ciszewski , Anabella Castillo , Kelly Monroe , Joana Torres , Shailja C Shah , Jean-Frédéric Colombel , Steven Itzkowitz , Rodney Newberry , Russell D Cohen , David T Rubin , Christopher Quince , Sarah Cobey , Iris H Jonkers , Christopher R Weber , Joel Pekow , Patrick C Wilson , Luis B Barreiro , Bana Jabri

Systematic Modeling of Risk-Associated Copy Number Alterations in Cancer.

International journal of molecular sciences

Avec: Alejandra Guardado , Raúl Aguirre-Gamboa , Victor Treviño

Deconvolution of bulk blood eQTL effects into immune cell subpopulations.

BMC bioinformatics

Avec: Raúl Aguirre-Gamboa , Niek de Klein , Jennifer di Tommaso , Annique Claringbould , Monique Gp van der Wijst , Dylan de Vries , Harm Brugge , Roy Oelen , Urmo Võsa , Maria M Zorro , Xiaojin Chu , Olivier B Bakker , Zuzanna Borek , Isis Ricaño-Ponce , Patrick Deelen , Cheng-Jiang Xu , Morris Swertz , Iris Jonkers , Sebo Withoff , Irma Joosten , Serena Sanna , Vinod Kumar , Hans J P M Koenen , Leo A B Joosten , Mihai G Netea , Cisca Wijmenga , Auteur inconnu , Lude Franke , Yang Li

Systematic Prioritization of Candidate Genes in Disease Loci Identifies

Frontiers in genetics

Avec: Adriaan van der Graaf , Maria M Zorro , Annique Claringbould , Urmo Võsa , Raúl Aguirre-Gamboa , Chan Li , Joram Mooiweer , Isis Ricaño-Ponce , Zuzanna Borek , Frits Koning , Yvonne Kooy-Winkelaar , Ludvig M Sollid , Shuo-Wang Qiao , Vinod Kumar , Yang Li , Lude Franke , Sebo Withoff , Cisca Wijmenga , Serena Sanna , Iris Jonkers , Auteur inconnu

Transmission of stimulus-induced epigenetic changes through cell division is coupled to continuous transcription factor activity.

Frontiers in immunology

Avec: Sarah Sun , Raúl Aguirre-Gamboa , Luis B Barreiro

BCG vaccination alters the epigenetic landscape of progenitor cells in human bone marrow to influence innate immune responses.

Immunity

Avec: Sarah J Sun , Raúl Aguirre-Gamboa , L Charlotte J de Bree , Joaquin Sanz , Anne Dumaine , Walter J F M van der Velden , Leo A B Joosten , Shabaana Khader , Maziar Divangahi , Mihai G Netea , Luis B Barreiro

Tissue alarmins and adaptive cytokine induce dynamic and distinct transcriptional responses in tissue-resident intraepithelial cytotoxic T lymphocytes.

Journal of autoimmunity

Avec: Maria Magdalena Zorro , Raul Aguirre-Gamboa , Toufic Mayassi , Cezary Ciszewski , Donatella Barisani , Shixian Hu , Rinse K Weersma , Sebo Withoff , Yang Li , Cisca Wijmenga , Bana Jabri , Iris H Jonkers

Arresting proliferation improves the cell identity of corneal endothelial cells in the New Zealand rabbit.

Molecular vision

Avec: Carlos-Alberto Rodríguez-Barrientos , Victor Trevino , Judith Zavala , María-Dolores Montalvo-Parra , Guillermo-Isaac Guerrero-Ramírez , Raul Aguirre-Gamboa , Jorge-Eugenio Valdez-García

A systematic review and functional bioinformatics analysis of genes associated with Crohn's disease identify more than 120 related genes.

BMC genomics

Avec: Debora Garza-Hernandez , Maricruz Sepulveda-Villegas , Jose Garcia-Pelaez , Raul Aguirre-Gamboa , Peter L Lakatos , Karol Estrada , Manuel Martinez-Vazquez , Victor Trevino

Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease.

Genome biology

Avec: Xiaojing Chu , Martin Jaeger , Joep Beumer , Olivier B Bakker , Raul Aguirre-Gamboa , Marije Oosting , Sanne P Smeekens , Simone Moorlag , Vera P Mourits , Valerie A C M Koeken , Charlotte de Bree , Trees Jansen , Ian T Mathews , Khoi Dao , Mahan Najhawan , Jeramie D Watrous , Irma Joosten , Sonia Sharma , Hans J P M Koenen , Sebo Withoff , Iris H Jonkers , Romana T Netea-Maier , Ramnik J Xavier , Lude Franke , Cheng-Jian Xu , Leo A B Joosten , Serena Sanna , Mohit Jain , Vinod Kumar , Hans Clevers , Cisca Wijmenga , Mihai G Netea , Yang Li

BCG vaccination impacts the epigenetic landscape of progenitor cells in human bone marrow.

bioRxiv : the preprint server for biology

Avec: Sarah J Sun , Raúl Aguirre-Gamboa , L Charlotte J de Bree , Joaquin Sanz , Anne Dumaine , Leo A B Joosten , Maziar Divangahi , Mihai G Netea , Luis B Barreiro

Réseau de co-auteurs

Raúl Aguirre-Gamboa 12 collaborations

Mihai G Netea 9 collaborations

Leo A B Joosten 8 collaborations

Yang Li 7 collaborations

Cisca Wijmenga 7 collaborations

Sebo Withoff 6 collaborations

Vinod Kumar 6 collaborations

Martin Jaeger 5 collaborations

Luis B Barreiro 5 collaborations

Serena Sanna 4 collaborations

Lude Franke 4 collaborations

Iris Jonkers 4 collaborations

Bana Jabri 4 collaborations

Sanne P Smeekens 4 collaborations

Irma Joosten 3 collaborations

Anne Dumaine 3 collaborations

Iris H Jonkers 3 collaborations

Vasiliki Matzaraki 2 collaborations

Melissa D Johnson 2 collaborations

Xiaojing Chu 2 collaborations

Marije Oosting 2 collaborations

Zachary M Earley 2 collaborations

Dustin G Shaw 2 collaborations

Saideep Gona 2 collaborations

Rob Ter Horst 2 collaborations

Heidi Lemmers 2 collaborations

Helga Dijkstra 2 collaborations

Ramnik J Xavier 2 collaborations

Romana T Netea-Maier 2 collaborations

Cezary Ciszewski 2 collaborations

Annique Claringbould 2 collaborations

Urmo Võsa 2 collaborations

Maria M Zorro 2 collaborations

Olivier B Bakker 2 collaborations

Zuzanna Borek 2 collaborations

Isis Ricaño-Ponce 2 collaborations

Hans J P M Koenen 2 collaborations

None None 2 collaborations

Sarah J Sun 2 collaborations

L Charlotte J de Bree 2 collaborations

Joaquin Sanz 2 collaborations

Maziar Divangahi 2 collaborations

Victor Trevino 2 collaborations

Natalia M Peñaranda-Fajardo 1 collaboration

Coby Meijer 1 collaboration

Yuanke Liang 1 collaboration

Bianca M Dijkstra 1 collaboration

Wilfred F A den Dunnen 1 collaboration

Frank A E Kruyt 1 collaboration

Kieu T T Le 1 collaboration

Diletta Rosati 1 collaboration

Alexandra Zhernakova 1 collaboration

Jingyuan Fu 1 collaboration

Ankit Malik 1 collaboration

Deepika Sharma 1 collaboration

Shaina McGrath 1 collaboration

Sarah Zabala 1 collaboration

Christopher Weber 1 collaboration

Mark S Gresnigt 1 collaboration

John R Perfect 1 collaboration

Frank L van de Veerdonk 1 collaboration

Bart-Jan Kullberg 1 collaboration

Shichina Kannambath 1 collaboration

Joseph N Jarvis 1 collaboration

Rachel M Wake 1 collaboration

Nicky Longley 1 collaboration

Angela Loyse 1 collaboration

Vicky Matzaraki 1 collaboration

Ronan Doyle 1 collaboration

Maria Paximadis 1 collaboration

Caroline T Tiemessen 1 collaboration

Alan Pittman 1 collaboration

Graeme Meintjes 1 collaboration

Thomas S Harrison 1 collaboration

Tihana Bicanic 1 collaboration

Wioletta Lisicka 1 collaboration

Joseph J Sifakis 1 collaboration

Anita Kowalczyk 1 collaboration

Jacob T Barlow 1 collaboration

Valentina Discepolo 1 collaboration

Ineke L Tan 1 collaboration

Jordan D Ernest 1 collaboration

Polly Matzinger 1 collaboration

Andrey Morgun 1 collaboration

Albert Bendelac 1 collaboration

Rustem F Ismagilov 1 collaboration

Natalia Shulzhenko 1 collaboration

Samantha J Riesenfeld 1 collaboration

Inge C L van den Munckhof 1 collaboration

Kiki Schraa 1 collaboration

Tessa Brand 1 collaboration

Tessel E Galesloot 1 collaboration

Jacqueline de Graaf 1 collaboration

Joost H W Rutten 1 collaboration

Niels P Riksen 1 collaboration

Lisa van de Wijer 1 collaboration

Wouter A van der Heijden 1 collaboration

Anna M W Janssen 1 collaboration

Michelle A E Brouwer 1 collaboration

Bram van Cranenbroek 1 collaboration

Antonius E van Herwaarden 1 collaboration

Hans Koenen 1 collaboration

Marcos C Vieira 1 collaboration

Nicholas DiNardi 1 collaboration

Anni Wang 1 collaboration

Jody Gelderloos-Arends 1 collaboration

Katherine R Meckel 1 collaboration

Anabella Castillo 1 collaboration

Kelly Monroe 1 collaboration

Joana Torres 1 collaboration

Shailja C Shah 1 collaboration

Jean-Frédéric Colombel 1 collaboration

Steven Itzkowitz 1 collaboration

Rodney Newberry 1 collaboration

Russell D Cohen 1 collaboration

David T Rubin 1 collaboration

Christopher Quince 1 collaboration

Sarah Cobey 1 collaboration

Christopher R Weber 1 collaboration

Joel Pekow 1 collaboration

Patrick C Wilson 1 collaboration

Alejandra Guardado 1 collaboration

Victor Treviño 1 collaboration

Niek de Klein 1 collaboration

Jennifer di Tommaso 1 collaboration

Monique Gp van der Wijst 1 collaboration

Dylan de Vries 1 collaboration

Harm Brugge 1 collaboration

Roy Oelen 1 collaboration

Xiaojin Chu 1 collaboration

Patrick Deelen 1 collaboration

Cheng-Jiang Xu 1 collaboration

Morris Swertz 1 collaboration

Adriaan van der Graaf 1 collaboration

Chan Li 1 collaboration

Joram Mooiweer 1 collaboration

Frits Koning 1 collaboration

Yvonne Kooy-Winkelaar 1 collaboration

Ludvig M Sollid 1 collaboration

Shuo-Wang Qiao 1 collaboration

Sarah Sun 1 collaboration

Walter J F M van der Velden 1 collaboration

Shabaana Khader 1 collaboration

Maria Magdalena Zorro 1 collaboration

Toufic Mayassi 1 collaboration

Donatella Barisani 1 collaboration

Shixian Hu 1 collaboration

Rinse K Weersma 1 collaboration

Carlos-Alberto Rodríguez-Barrientos 1 collaboration

Judith Zavala 1 collaboration

María-Dolores Montalvo-Parra 1 collaboration

Guillermo-Isaac Guerrero-Ramírez 1 collaboration

Jorge-Eugenio Valdez-García 1 collaboration

Debora Garza-Hernandez 1 collaboration

Maricruz Sepulveda-Villegas 1 collaboration

Jose Garcia-Pelaez 1 collaboration

Peter L Lakatos 1 collaboration

Karol Estrada 1 collaboration

Manuel Martinez-Vazquez 1 collaboration

Joep Beumer 1 collaboration

Simone Moorlag 1 collaboration

Vera P Mourits 1 collaboration

Valerie A C M Koeken 1 collaboration

Charlotte de Bree 1 collaboration

Trees Jansen 1 collaboration

Ian T Mathews 1 collaboration

Khoi Dao 1 collaboration

Mahan Najhawan 1 collaboration

Jeramie D Watrous 1 collaboration

Sonia Sharma 1 collaboration

Cheng-Jian Xu 1 collaboration

Mohit Jain 1 collaboration

Hans Clevers 1 collaboration