Michael T Woodside

Affiliations

Department of Physics, University of Alberta, Edmonton, Alberta, Canada lp26@cornell.edu mwoodsid@ualberta.ca dinman@umd.edu.

Publications (16)

Structural and functional conservation of the programmed -1 ribosomal frameshift signal of SARS coronavirus 2 (SARS-CoV-2).

The Journal of biological chemistry

Avec: Jamie A Kelly , Alexandra N Olson , Krishna Neupane , Sneha Munshi , Josue San Emeterio , Lois Pollack , Michael T Woodside , Jonathan D Dinman

Complex dynamics under tension in a high-efficiency frameshift stimulatory structure.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Matthew T J Halma , Dustin B Ritchie , Tonia R Cappellano , Krishna Neupane , Michael T Woodside

Programmed -1 Ribosomal Frameshifting in coronaviruses: A therapeutic target.

Virology

Avec: Jamie A Kelly , Michael T Woodside , Jonathan D Dinman

Atomistic structure of the SARS-CoV-2 pseudoknot in solution from SAXS-driven molecular dynamics.

Nucleic acids research

Avec: Weiwei He , Josue San Emeterio , Michael T Woodside , Serdal Kirmizialtin , Lois Pollack

Nonlinear effects in optical trapping of titanium dioxide and diamond nanoparticles.

Biophysical journal

Avec: Anita Devi , Krishna Neupane , Haksung Jung , Keir C Neuman , Michael T Woodside

Direct observation of prion-like propagation of protein misfolding templated by pathogenic mutants.

Nature chemical biology

Avec: Krishna Neupane , Abhishek Narayan , Supratik Sen Mojumdar , Gaurav Adhikari , Craig R Garen , Michael T Woodside

Memory effects in single-molecule force spectroscopy measurements of biomolecular folding.

Physical chemistry chemical physics : PCCP

Avec: Andrew G T Pyo , Michael T Woodside

Probing the Basis of α-Synuclein Aggregation by Comparing Simulations to Single-Molecule Experiments.

Biophysical journal

Avec: Cassandra D M Churchill , Mark A Healey , Jordane Preto , Jack A Tuszynski , Michael T Woodside

Measuring the average shape of transition paths during the folding of a single biological molecule.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Noel Q Hoffer , Krishna Neupane , Andrew G T Pyo , Michael T Woodside

Probing microscopic conformational dynamics in folding reactions by measuring transition paths.

Current opinion in chemical biology

Avec: Noel Q Hoffer , Michael T Woodside

Anti-Frameshifting Ligand Active against SARS Coronavirus-2 Is Resistant to Natural Mutations of the Frameshift-Stimulatory Pseudoknot.

Journal of molecular biology

Avec: Krishna Neupane , Sneha Munshi , Meng Zhao , Dustin B Ritchie , Sandaru M Ileperuma , Michael T Woodside

Modeling the structure of the frameshift-stimulatory pseudoknot in SARS-CoV-2 reveals multiple possible conformers.

PLoS computational biology

Avec: Sara Ibrahim Omar , Meng Zhao , Rohith Vedhthaanth Sekar , Sahar Arbabi Moghadam , Jack A Tuszynski , Michael T Woodside

Observing the base-by-base search for native structure along transition paths during the folding of single nucleic acid hairpins.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Noel Q Hoffer , Krishna Neupane , Michael T Woodside

Internalization of α-synuclein oligomers into SH-SY5Y cells.

Biophysical journal

Avec: Lindsay J Shearer , Nils O Petersen , Michael T Woodside

Probing the origin of prion protein misfolding via reconstruction of ancestral proteins.

Protein science : a publication of the Protein Society

Avec: Leonardo M Cortez , Anneliese J Morrison , Craig R Garen , Sawyer Patterson , Toshi Uyesugi , Rafayel Petrosyan , Rohith Vedhthaanth Sekar , Michael J Harms , Michael T Woodside , Valerie L Sim

Early stages of aggregation of engineered α-synuclein monomers and oligomers in solution.

Scientific reports

Avec: Xi Li , Chunhua Dong , Marion Hoffmann , Craig R Garen , Leonardo M Cortez , Nils O Petersen , Michael T Woodside

Réseau de co-auteurs

Krishna Neupane 7 collaborations

Craig R Garen 3 collaborations

Noel Q Hoffer 3 collaborations

Jamie A Kelly 2 collaborations

Sneha Munshi 2 collaborations

Josue San Emeterio 2 collaborations

Lois Pollack 2 collaborations

Jonathan D Dinman 2 collaborations

Dustin B Ritchie 2 collaborations

Andrew G T Pyo 2 collaborations

Jack A Tuszynski 2 collaborations

Meng Zhao 2 collaborations

Rohith Vedhthaanth Sekar 2 collaborations

Nils O Petersen 2 collaborations

Leonardo M Cortez 2 collaborations

Alexandra N Olson 1 collaboration

Matthew T J Halma 1 collaboration

Tonia R Cappellano 1 collaboration

Weiwei He 1 collaboration

Serdal Kirmizialtin 1 collaboration

Anita Devi 1 collaboration

Haksung Jung 1 collaboration

Keir C Neuman 1 collaboration

Abhishek Narayan 1 collaboration

Supratik Sen Mojumdar 1 collaboration

Gaurav Adhikari 1 collaboration

Cassandra D M Churchill 1 collaboration

Mark A Healey 1 collaboration

Jordane Preto 1 collaboration

Sandaru M Ileperuma 1 collaboration

Sara Ibrahim Omar 1 collaboration

Sahar Arbabi Moghadam 1 collaboration

Lindsay J Shearer 1 collaboration

Anneliese J Morrison 1 collaboration

Sawyer Patterson 1 collaboration

Toshi Uyesugi 1 collaboration

Rafayel Petrosyan 1 collaboration

Michael J Harms 1 collaboration

Valerie L Sim 1 collaboration

Xi Li 1 collaboration

Chunhua Dong 1 collaboration

Marion Hoffmann 1 collaboration