Martin Thunemann

Affiliations

Department of Neurosciences, University of California, San Diego, La Jolla, California.

Publications (24)

Awake Mouse Imaging: From Two-Photon Microscopy to Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging.

Biological psychiatry. Cognitive neuroscience and neuroimaging

Avec: Michèle Desjardins , Kıvılcım Kılıç , Martin Thunemann , Celine Mateo , Dominic Holland , Christopher G L Ferri , Jonathan A Cremonesi , Baoqiang Li , Qun Cheng , Kimberly L Weldy , Payam A Saisan , David Kleinfeld , Takaki Komiyama , Thomas T Liu , Robert Bussell , Eric C Wong , Miriam Scadeng , Andrew K Dunn , David A Boas , Sava Sakadžić , Joseph B Mandeville , Richard B Buxton , Anders M Dale , Anna Devor

Phosphorescent Pt(ii) complexes spatially arrayed in micellar polymeric nanoparticles providing dual readout for multimodal imaging.

Chemical communications (Cambridge, England)

Avec: Maria T Proetto , Jan Sanning , Martin Peterlechner , Martin Thunemann , Linda Stegemann , Sanaz Sadegh , Anna Devor , Nathan C Gianneschi , Cristian A Strassert

Guide to the construction and use of an adaptive optics two-photon microscope with direct wavefront sensing.

bioRxiv : the preprint server for biology

Avec: Pantong Yao , Rui Liu , Thomas Broginni , Martin Thunemann , David Kleinfeld

Understanding the nervous system: lessons from Frontiers in Neurophotonics.

Neurophotonics

Avec: Yves De Koninck , Johanna Alonso , Stéphane Bancelin , Jean-Claude Béïque , Erik Bélanger , Catherine Bouchard , Marco Canossa , Johan Chaniot , Daniel Choquet , Marie-Ève Crochetière , Nanke Cui , Lydia Danglot , Paul De Koninck , Anna Devor , Mathieu Ducros , Angela M Getz , Mohamed Haouat , Iván Coto Hernández , Nate Jowett , Iason Keramidis , Céline Larivière-Loiselle , Flavie Lavoie-Cardinal , Harold D MacGillavry , Asiye Malkoç , Mattia Mancinelli , Pierre Marquet , Steven Minderler , Maxime Moreaud , U Valentin Nägerl , Katerina Papanikolopoulou , Marie-Eve Paquet , Lorenzo Pavesi , David Perrais , Romain Sansonetti , Martin Thunemann , Beatrice Vignoli , Jenny Yau , Clara Zaccaria

Selective Formation of Porous Pt Nanorods for Highly Electrochemically Efficient Neural Electrode Interfaces.

Nano letters

Avec: Mehran Ganji , Angelique C Paulk , Jimmy C Yang , Nasim W Vahidi , Sang Heon Lee , Ren Liu , Lorraine Hossain , Ezequiel M Arneodo , Martin Thunemann , Michiko Shigyo , Atsunori Tanaka , Sang Baek Ryu , Seung Woo Lee , Youngbin Tchoe , Martin Marsala , Anna Devor , Daniel R Cleary , Joel R Martin , Hongseok Oh , Vikash Gilja , Timothy Q Gentner , Shelley I Fried , Eric Halgren , Sydney S Cash , Shadi A Dayeh

Apolipoprotein E derived from CD11c

iScience

Avec: Manuela Sauter , Reinhard J Sauter , Henry Nording , Chaolan Lin , Marcus Olbrich , Stella Autenrieth , Christian Gleissner , Martin Thunemann , Nadia Otero , Esther Lutgens , Zouhair Aherrahrou , Dennis Wolf , Lars Zender , Sven Meuth , Robert Feil , Harald F Langer

All-Optical Electrophysiology in hiPSC-Derived Neurons With Synthetic Voltage Sensors.

Frontiers in cellular neuroscience

Avec: Francesca Puppo , Sanaz Sadegh , Cleber A Trujillo , Martin Thunemann , Evan P Campbell , Matthieu Vandenberghe , Xiwei Shan , Ibrahim A Akkouh , Evan W Miller , Brenda L Bloodgood , Gabriel A Silva , Anders M Dale , Gaute T Einevoll , Srdjan Djurovic , Ole A Andreassen , Alysson R Muotri , Anna Devor

Multimodal monitoring of human cortical organoids implanted in mice reveal functional connection with visual cortex.

Nature communications

Avec: Madison N Wilson , Martin Thunemann , Xin Liu , Yichen Lu , Francesca Puppo , Jason W Adams , Jeong-Hoon Kim , Mehrdad Ramezani , Donald P Pizzo , Srdjan Djurovic , Ole A Andreassen , Abed AlFatah Mansour , Fred H Gage , Alysson R Muotri , Anna Devor , Duygu Kuzum

Correlation Structure in Micro-ECoG Recordings is Described by Spatially Coherent Components.

PLoS computational biology

Avec: Nicholas Rogers , John Hermiz , Mehran Ganji , Erik Kaestner , Kıvılcım Kılıç , Lorraine Hossain , Martin Thunemann , Daniel R Cleary , Bob S Carter , David Barba , Anna Devor , Eric Halgren , Shadi A Dayeh , Vikash Gilja

Chronic Cranial Windows for Long Term Multimodal Neurovascular Imaging in Mice.

Frontiers in physiology

Avec: Kıvılcım Kılıç , Michèle Desjardins , Jianbo Tang , Martin Thunemann , Smrithi Sunil , Şefik Evren Erdener , Dmitry D Postnov , David A Boas , Anna Devor

Scalable Thousand Channel Penetrating Microneedle Arrays on Flex for Multimodal and Large Area Coverage BrainMachine Interfaces.

Advanced functional materials

Avec: Sang Heon Lee , Martin Thunemann , Keundong Lee , Daniel R Cleary , Karen J Tonsfeldt , Hongseok Oh , Farid Azzazy , Youngbin Tchoe , Andrew M Bourhis , Lorraine Hossain , Yun Goo Ro , Atsunori Tanaka , Kıvılcım Kılıç , Anna Devor , Shadi A Dayeh

Time-Lagged Functional Ultrasound for Multi-Parametric Cerebral Hemodynamic Imaging.

IEEE transactions on medical imaging

Avec: Bingxue Liu , Yongchao Wang , Natalie Fomin-Thunemann , Martin Thunemann , Kivilcim Kilic , Anna Devor , Xiaojun Cheng , Jiyong Tan , John Jiang , David A Boas , Jianbo Tang

Efficient non-degenerate two-photon excitation for fluorescence microscopy.

Optics express

Avec: Sanaz Sadegh , Mu-Han Yang , Christopher G L Ferri , Martin Thunemann , Payam A Saisan , Zhe Wei , Erik A Rodriguez , Stephen R Adams , Kivilcim Kiliç , David A Boas , Sava Sakadžić , Anna Devor , Yeshaiahu Fainman

Measurement of the relative non-degenerate two-photon absorption cross-section for fluorescence microscopy.

Optics express

Avec: Sanaz Sadegh , Mu-Han Yang , Christopher G L Ferri , Martin Thunemann , Payam A Saisan , Anna Devor , Yeshaiahu Fainman

Visual stimulation drives retinotopic acetylcholine release in the mouse visual cortex.

bioRxiv : the preprint server for biology

Avec: Scott G Knudstrup , Catalina Martinez , Bradley C Rauscher , Patrick R Doran , Natalie Fomin-Thunemann , Kivilcim Kilic , John Jiang , Anna Devor , Martin Thunemann , Jeffrey P Gavornik

Construction and use of an adaptive optics two-photon microscope with direct wavefront sensing.

Nature protocols

Avec: Pantong Yao , Rui Liu , Thomas Broggini , Martin Thunemann , David Kleinfeld

Widefield

Neurophotonics

Avec: Patrick R Doran , Natalie Fomin-Thunemann , Rockwell P Tang , Dora Balog , Bernhard Zimmerman , Kıvılcım Kılıç , Emily A Martin , Sreekanth Kura , Harrison P Fisher , Grace Chabbott , Joel Herbert , Bradley C Rauscher , John X Jiang , Sava Sakadzic , David A Boas , Anna Devor , Ichun Anderson Chen , Martin Thunemann

Two-photon microscopic imaging of capillary red blood cell flux in mouse brain reveals vulnerability of cerebral white matter to hypoperfusion.

Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Avec: Baoqiang Li , Ryo Ohtomo , Martin Thunemann , Stephen R Adams , Jing Yang , Buyin Fu , Mohammad A Yaseen , Chongzhao Ran , Jonathan R Polimeni , David A Boas , Anna Devor , Eng H Lo , Ken Arai , Sava Sakadžić

Impact of Brain Surface Boundary Conditions on Electrophysiology and Implications for Electrocorticography.

Frontiers in neuroscience

Avec: Nicholas Rogers , Martin Thunemann , Anna Devor , Vikash Gilja

A Suite of Neurophotonic Tools to Underpin the Contribution of Internal Brain States in fMRI.

Current opinion in biomedical engineering

Avec: Philipp Mächler , Thomas Broggini , Celine Mateo , Martin Thunemann , Natalie Fomin-Thunemann , Patrick R Doran , Ikbal Sencan , Kivilcim Kilic , Michèle Desjardins , Hana Uhlirova , Mohammad A Yaseen , David A Boas , Andreas A Linninger , Massimo Vergassola , Xin Yu , Laura D Lewis , Jonathan R Polimeni , Bruce R Rosen , Sava Sakadžić , Richard B Buxton , Martin Lauritzen , David Kleinfeld , Anna Devor

Baseline oxygen consumption decreases with cortical depth.

PLoS biology

Avec: Philipp Mächler , Natalie Fomin-Thunemann , Martin Thunemann , Marte Julie Sætra , Michèle Desjardins , Kıvılcım Kılıç , Layth N Amra , Emily A Martin , Ichun Anderson Chen , Ikbal Şencan-Eğilmez , Baoqiang Li , Payam Saisan , John X Jiang , Qun Cheng , Kimberly L Weldy , David A Boas , Richard B Buxton , Gaute T Einevoll , Anders M Dale , Sava Sakadžić , Anna Devor

Protocol to visualize CD11c

STAR protocols

Avec: Manuela Sauter , Reinhard J Sauter , Marcus Olbrich , Martin Thunemann , Susanne Feil , Robert Feil , Harald F Langer

PV interneurons evoke astrocytic Ca

Glia

Avec: Aske Krogsgaard , Leonora Sperling , Matilda Dahlqvist , Kirsten Thomsen , Gabriele Vydmantaite , Fangyuan Li , Martin Thunemann , Martin Lauritzen , Barbara Lykke Lind

Widefield in vivo imaging system with two fluorescence and two reflectance channels, a single sCMOS detector, and shielded illumination.

bioRxiv : the preprint server for biology

Avec: Patrick R Doran , Natalie Fomin-Thunemann , Rockwell P Tang , Dora Balog , Bernhard Zimmerman , Kivilcim Kilic , Emily A Martin , Sreekanth Kura , Harrison P Fisher , Grace Chabbott , Joel Herbert , Bradley C Rauscher , John X Jiang , Sava Sakadzic , David A Boas , Anna Devor , Ichun Anderson Chen , Martin Thunemann

Réseau de co-auteurs

Anna Devor 19 collaborations

David A Boas 9 collaborations

Kıvılcım Kılıç 6 collaborations

Natalie Fomin-Thunemann 6 collaborations

Sava Sakadžić 5 collaborations

Michèle Desjardins 4 collaborations

David Kleinfeld 4 collaborations

Sanaz Sadegh 4 collaborations

Kivilcim Kilic 4 collaborations

Patrick R Doran 4 collaborations

Christopher G L Ferri 3 collaborations

Baoqiang Li 3 collaborations

Payam A Saisan 3 collaborations

Richard B Buxton 3 collaborations

Anders M Dale 3 collaborations

Lorraine Hossain 3 collaborations

Daniel R Cleary 3 collaborations

Vikash Gilja 3 collaborations

Shadi A Dayeh 3 collaborations

Bradley C Rauscher 3 collaborations

Emily A Martin 3 collaborations

John X Jiang 3 collaborations

Ichun Anderson Chen 3 collaborations

Celine Mateo 2 collaborations

Qun Cheng 2 collaborations

Kimberly L Weldy 2 collaborations

Pantong Yao 2 collaborations

Rui Liu 2 collaborations

Mehran Ganji 2 collaborations

Sang Heon Lee 2 collaborations

Atsunori Tanaka 2 collaborations

Youngbin Tchoe 2 collaborations

Hongseok Oh 2 collaborations

Eric Halgren 2 collaborations

Manuela Sauter 2 collaborations

Reinhard J Sauter 2 collaborations

Marcus Olbrich 2 collaborations

Robert Feil 2 collaborations

Harald F Langer 2 collaborations

Francesca Puppo 2 collaborations

Gaute T Einevoll 2 collaborations

Srdjan Djurovic 2 collaborations

Ole A Andreassen 2 collaborations

Alysson R Muotri 2 collaborations

Nicholas Rogers 2 collaborations

Jianbo Tang 2 collaborations

John Jiang 2 collaborations

Mu-Han Yang 2 collaborations

Stephen R Adams 2 collaborations

Yeshaiahu Fainman 2 collaborations

Thomas Broggini 2 collaborations

Rockwell P Tang 2 collaborations

Dora Balog 2 collaborations

Bernhard Zimmerman 2 collaborations

Sreekanth Kura 2 collaborations

Harrison P Fisher 2 collaborations

Grace Chabbott 2 collaborations

Joel Herbert 2 collaborations

Sava Sakadzic 2 collaborations

Mohammad A Yaseen 2 collaborations

Jonathan R Polimeni 2 collaborations

Philipp Mächler 2 collaborations

Martin Lauritzen 2 collaborations

Dominic Holland 1 collaboration

Jonathan A Cremonesi 1 collaboration

Takaki Komiyama 1 collaboration

Thomas T Liu 1 collaboration

Robert Bussell 1 collaboration

Eric C Wong 1 collaboration

Miriam Scadeng 1 collaboration

Andrew K Dunn 1 collaboration

Joseph B Mandeville 1 collaboration

Maria T Proetto 1 collaboration

Jan Sanning 1 collaboration

Martin Peterlechner 1 collaboration

Linda Stegemann 1 collaboration

Nathan C Gianneschi 1 collaboration

Cristian A Strassert 1 collaboration

Thomas Broginni 1 collaboration

Yves De Koninck 1 collaboration

Johanna Alonso 1 collaboration

Stéphane Bancelin 1 collaboration

Jean-Claude Béïque 1 collaboration

Erik Bélanger 1 collaboration

Catherine Bouchard 1 collaboration

Marco Canossa 1 collaboration

Johan Chaniot 1 collaboration

Daniel Choquet 1 collaboration

Marie-Ève Crochetière 1 collaboration

Nanke Cui 1 collaboration

Lydia Danglot 1 collaboration

Paul De Koninck 1 collaboration

Mathieu Ducros 1 collaboration

Angela M Getz 1 collaboration

Mohamed Haouat 1 collaboration

Iván Coto Hernández 1 collaboration

Nate Jowett 1 collaboration

Iason Keramidis 1 collaboration

Céline Larivière-Loiselle 1 collaboration

Flavie Lavoie-Cardinal 1 collaboration

Harold D MacGillavry 1 collaboration

Asiye Malkoç 1 collaboration

Mattia Mancinelli 1 collaboration

Pierre Marquet 1 collaboration

Steven Minderler 1 collaboration

Maxime Moreaud 1 collaboration

U Valentin Nägerl 1 collaboration

Katerina Papanikolopoulou 1 collaboration

Marie-Eve Paquet 1 collaboration

Lorenzo Pavesi 1 collaboration

David Perrais 1 collaboration

Romain Sansonetti 1 collaboration

Beatrice Vignoli 1 collaboration

Jenny Yau 1 collaboration

Clara Zaccaria 1 collaboration

Angelique C Paulk 1 collaboration

Jimmy C Yang 1 collaboration

Nasim W Vahidi 1 collaboration

Ren Liu 1 collaboration

Ezequiel M Arneodo 1 collaboration

Michiko Shigyo 1 collaboration

Sang Baek Ryu 1 collaboration

Seung Woo Lee 1 collaboration

Martin Marsala 1 collaboration

Joel R Martin 1 collaboration

Timothy Q Gentner 1 collaboration

Shelley I Fried 1 collaboration

Sydney S Cash 1 collaboration

Henry Nording 1 collaboration

Chaolan Lin 1 collaboration

Stella Autenrieth 1 collaboration

Christian Gleissner 1 collaboration

Nadia Otero 1 collaboration

Esther Lutgens 1 collaboration

Zouhair Aherrahrou 1 collaboration

Dennis Wolf 1 collaboration

Lars Zender 1 collaboration

Sven Meuth 1 collaboration

Cleber A Trujillo 1 collaboration

Evan P Campbell 1 collaboration

Matthieu Vandenberghe 1 collaboration

Xiwei Shan 1 collaboration

Ibrahim A Akkouh 1 collaboration

Evan W Miller 1 collaboration

Brenda L Bloodgood 1 collaboration

Gabriel A Silva 1 collaboration

Madison N Wilson 1 collaboration

Xin Liu 1 collaboration

Yichen Lu 1 collaboration

Jason W Adams 1 collaboration

Jeong-Hoon Kim 1 collaboration

Mehrdad Ramezani 1 collaboration

Donald P Pizzo 1 collaboration

Abed AlFatah Mansour 1 collaboration

Fred H Gage 1 collaboration

Duygu Kuzum 1 collaboration

John Hermiz 1 collaboration

Erik Kaestner 1 collaboration

Bob S Carter 1 collaboration

David Barba 1 collaboration

Smrithi Sunil 1 collaboration

Şefik Evren Erdener 1 collaboration

Dmitry D Postnov 1 collaboration

Keundong Lee 1 collaboration

Karen J Tonsfeldt 1 collaboration

Farid Azzazy 1 collaboration

Andrew M Bourhis 1 collaboration

Yun Goo Ro 1 collaboration

Bingxue Liu 1 collaboration

Yongchao Wang 1 collaboration

Xiaojun Cheng 1 collaboration

Jiyong Tan 1 collaboration

Zhe Wei 1 collaboration

Erik A Rodriguez 1 collaboration

Kivilcim Kiliç 1 collaboration

Scott G Knudstrup 1 collaboration

Catalina Martinez 1 collaboration

Jeffrey P Gavornik 1 collaboration

Ryo Ohtomo 1 collaboration

Jing Yang 1 collaboration

Buyin Fu 1 collaboration

Chongzhao Ran 1 collaboration

Eng H Lo 1 collaboration

Ken Arai 1 collaboration

Ikbal Sencan 1 collaboration

Hana Uhlirova 1 collaboration

Andreas A Linninger 1 collaboration

Massimo Vergassola 1 collaboration

Xin Yu 1 collaboration

Laura D Lewis 1 collaboration

Bruce R Rosen 1 collaboration

Marte Julie Sætra 1 collaboration

Layth N Amra 1 collaboration

Ikbal Şencan-Eğilmez 1 collaboration

Payam Saisan 1 collaboration

Susanne Feil 1 collaboration

Aske Krogsgaard 1 collaboration

Leonora Sperling 1 collaboration

Matilda Dahlqvist 1 collaboration

Kirsten Thomsen 1 collaboration

Gabriele Vydmantaite 1 collaboration

Fangyuan Li 1 collaboration

Barbara Lykke Lind 1 collaboration