Marie Bernkopf

Affiliations

St. Anna Children's Cancer Research Institute (CCRI), 1090 Vienna, Austria.

Publications (14)

Landscape of Bone Marrow Metastasis in Human Neuroblastoma Unraveled by Transcriptomics and Deep Multiplex Imaging.

Cancers

Avec: Daria Lazic , Florian Kromp , Fikret Rifatbegovic , Peter Repiscak , Michael Kirr , Filip Mivalt , Florian Halbritter , Marie Bernkopf , Andrea Bileck , Marek Ussowicz , Inge M Ambros , Peter F Ambros , Christopher Gerner , Ruth Ladenstein , Christian Ostalecki , Sabine Taschner-Mandl

Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis.

Nature communications

Avec: Irfete S Fetahu , Wolfgang Esser-Skala , Rohit Dnyansagar , Samuel Sindelar , Fikret Rifatbegovic , Andrea Bileck , Lukas Skos , Eva Bozsaky , Daria Lazic , Lisa Shaw , Marcus Tötzl , Dora Tarlungeanu , Marie Bernkopf , Magdalena Rados , Wolfgang Weninger , Eleni M Tomazou , Christoph Bock , Christopher Gerner , Ruth Ladenstein , Matthias Farlik , Nikolaus Fortelny , Sabine Taschner-Mandl

Novel Insights into Diagnosis, Biology and Treatment of Primary Diffuse Leptomeningeal Melanomatosis.

Journal of personalized medicine

Avec: Alicia Baumgartner , Natalia Stepien , Lisa Mayr , Sibylle Madlener , Christian Dorfer , Maria T Schmook , Tatjana Traub-Weidinger , Daniela Lötsch-Gojo , Dominik Kirchhofer , Dominik Reisinger , Cora Hedrich , Saleha Arshad , Stefan Irschik , Heidrun Boztug , Gernot Engstler , Marie Bernkopf , Fikret Rifatbegovic , Christoph Höller , Irene Slavc , Walter Berger , Leonhard Müllauer , Christine Haberler , Amedeo A Azizi , Andreas Peyrl , Johannes Gojo

Multimodal analysis of cell-free DNA whole-genome sequencing for pediatric cancers with low mutational burden.

Nature communications

Avec: Peter Peneder , Adrian M Stütz , Didier Surdez , Manuela Krumbholz , Sabine Semper , Mathieu Chicard , Nathan C Sheffield , Gaelle Pierron , Eve Lapouble , Marcus Tötzl , Bekir Ergüner , Daniele Barreca , André F Rendeiro , Abbas Agaimy , Heidrun Boztug , Gernot Engstler , Michael Dworzak , Marie Bernkopf , Sabine Taschner-Mandl , Inge M Ambros , Ola Myklebost , Perrine Marec-Bérard , Susan Ann Burchill , Bernadette Brennan , Sandra J Strauss , Jeremy Whelan , Gudrun Schleiermacher , Christiane Schaefer , Uta Dirksen , Caroline Hutter , Kjetil Boye , Peter F Ambros , Olivier Delattre , Markus Metzler , Christoph Bock , Eleni M Tomazou

A human neural crest model reveals the developmental impact of neuroblastoma-associated chromosomal aberrations.

Nature communications

Avec: Ingrid M Saldana-Guerrero , Luis F Montano-Gutierrez , Katy Boswell , Christoph Hafemeister , Evon Poon , Lisa E Shaw , Dylan Stavish , Rebecca A Lea , Sara Wernig-Zorc , Eva Bozsaky , Irfete S Fetahu , Peter Zoescher , Ulrike Pötschger , Marie Bernkopf , Andrea Wenninger-Weinzierl , Caterina Sturtzel , Celine Souilhol , Sophia Tarelli , Mohamed R Shoeb , Polyxeni Bozatzi , Magdalena Rados , Maria Guarini , Michelle C Buri , Wolfgang Weninger , Eva M Putz , Miller Huang , Ruth Ladenstein , Peter W Andrews , Ivana Barbaric , George D Cresswell , Helen E Bryant , Martin Distel , Louis Chesler , Sabine Taschner-Mandl , Matthias Farlik , Anestis Tsakiridis , Florian Halbritter

Frequency and Prognostic Impact of

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

Avec: Angela Bellini , Ulrike Pötschger , Virginie Bernard , Eve Lapouble , Sylvain Baulande , Peter F Ambros , Nathalie Auger , Klaus Beiske , Marie Bernkopf , David R Betts , Jaydutt Bhalshankar , Nick Bown , Katleen de Preter , Nathalie Clément , Valérie Combaret , Jaime Font de Mora , Sally L George , Irene Jiménez , Marta Jeison , Barbara Marques , Tommy Martinsson , Katia Mazzocco , Martina Morini , Annick Mühlethaler-Mottet , Rosa Noguera , Gaelle Pierron , Maria Rossing , Sabine Taschner-Mandl , Nadine Van Roy , Ales Vicha , Louis Chesler , Walentyna Balwierz , Victoria Castel , Martin Elliott , Per Kogner , Geneviève Laureys , Roberto Luksch , Josef Malis , Maja Popovic-Beck , Shifra Ash , Olivier Delattre , Dominique Valteau-Couanet , Deborah A Tweddle , Ruth Ladenstein , Gudrun Schleiermacher

Topical bevacizumab for the treatment of corneal vascularization in dogs: A case series.

Veterinary ophthalmology

Avec: Lisa-Marie Muellerleile , Michael Bernkopf , Michael Wambacher , Barbara Nell

Personalized recurrence risk assessment following the birth of a child with a pathogenic de novo mutation.

Nature communications

Avec: Marie Bernkopf , Ummi B Abdullah , Stephen J Bush , Katherine A Wood , Sahar Ghaffari , Eleni Giannoulatou , Nils Koelling , Geoffrey J Maher , Loïc M Thibaut , Jonathan Williams , Edward M Blair , Fiona Blanco Kelly , Angela Bloss , Emma Burkitt-Wright , Natalie Canham , Alexander T Deng , Abhijit Dixit , Jacqueline Eason , Frances Elmslie , Alice Gardham , Eleanor Hay , Muriel Holder , Tessa Homfray , Jane A Hurst , Diana Johnson , Wendy D Jones , Usha Kini , Emma Kivuva , Ajith Kumar , Melissa M Lees , Harry G Leitch , Jenny E V Morton , Andrea H Németh , Shwetha Ramachandrappa , Katherine Saunders , Deborah J Shears , Lucy Side , Miranda Splitt , Alison Stewart , Helen Stewart , Mohnish Suri , Penny Clouston , Robert W Davies , Andrew O M Wilkie , Anne Goriely

Zoledronic acid add-on therapy for standard-risk Ewing sarcoma patients in the Ewing 2008R1 trial.

Clinical cancer research : an official journal of the American Association for Cancer Research

Avec: Raphael Koch , Lianne Haveman , Ruth Ladenstein , Bénédicte Brichard , Heribert Juergens , Soňa Cyprová , Henk van den Berg , Wolf Hassenpflug , Anna Raciborska , Torben Ek , Daniel Baumhoer , Gerlinde Egerer , Leo Kager , Marleen Renard , Peter Hauser , Stefan Burdach , Judith V M G Bovee , Angela M Hong , Peter Reichardt , Jarmila Kruseova , Arne Streitbürger , Thomas Kühne , Torsten Kessler , Marie Bernkopf , Trude Butterfaß-Bahloul , Catharina Dhooge , Sebastian Bauer , János Kiss , Michael Paulussen , Fiona Bonar , Andreas Ranft , Beate Timmermann , Jelena Rascon , Volker Vieth , Jukka Kanerva , Andreas Faldum , Wolfgang Hartmann , Lars Hjorth , Vivek A Bhadri , Markus Metzler , Hans Gelderblom , Uta Dirksen

amplimap: a versatile tool to process and analyze targeted NGS data.

Bioinformatics (Oxford, England)

Avec: Nils Koelling , Marie Bernkopf , Eduardo Calpena , Geoffrey J Maher , Kerry A Miller , Hannah K Ralph , Anne Goriely , Andrew O M Wilkie

Comparison of three different methods to detect bone marrow involvement in patients with neuroblastoma.

Journal of cancer research and clinical oncology

Avec: Felix Schriegel , Sabine Taschner-Mandl , Marie Bernkopf , Uwe Grunwald , Nikolai Siebert , Peter F Ambros , Inge Ambros , Holger N Lode , Guenter Henze , Karoline Ehlert

The impact of chemo- and radiotherapy treatments on selfish de novo FGFR2 mutations in sperm of cancer survivors.

Human reproduction (Oxford, England)

Avec: Geoffrey J Maher , Marie Bernkopf , Nils Koelling , Andrew O M Wilkie , Marvin L Meistrich , Anne Goriely

High-Dose Treosulfan and Melphalan as Consolidation Therapy Versus Standard Therapy for High-Risk (Metastatic) Ewing Sarcoma.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

Avec: Raphael Koch , Hans Gelderblom , Lianne Haveman , Benedicte Brichard , Heribert Jürgens , Sona Cyprova , Henk van den Berg , Wolf Hassenpflug , Anna Raciborska , Torben Ek , Daniel Baumhoer , Gerlinde Egerer , Hans Theodor Eich , Marleen Renard , Peter Hauser , Stefan Burdach , Judith Bovee , Fiona Bonar , Peter Reichardt , Jarmila Kruseova , Jendrik Hardes , Thomas Kühne , Torsten Kessler , Stephane Collaud , Marie Bernkopf , Trude Butterfaß-Bahloul , Catharina Dhooge , Sebastian Bauer , János Kiss , Michael Paulussen , Angela Hong , Andreas Ranft , Beate Timmermann , Jelena Rascon , Volker Vieth , Jukka Kanerva , Andreas Faldum , Markus Metzler , Wolfgang Hartmann , Lars Hjorth , Vivek Bhadri , Uta Dirksen

The evolutionary dynamics of extrachromosomal DNA in human cancers.

Nature genetics

Avec: Joshua T Lange , John C Rose , Celine Y Chen , Yuriy Pichugin , Liangqi Xie , Jun Tang , King L Hung , Kathryn E Yost , Quanming Shi , Marcella L Erb , Utkrisht Rajkumar , Sihan Wu , Sabine Taschner-Mandl , Marie Bernkopf , Charles Swanton , Zhe Liu , Weini Huang , Howard Y Chang , Vineet Bafna , Anton G Henssen , Benjamin Werner , Paul S Mischel

Réseau de co-auteurs

Sabine Taschner-Mandl 7 collaborations

Ruth Ladenstein 5 collaborations

Peter F Ambros 4 collaborations

Fikret Rifatbegovic 3 collaborations

Uta Dirksen 3 collaborations

Markus Metzler 3 collaborations

Nils Koelling 3 collaborations

Geoffrey J Maher 3 collaborations

Andrew O M Wilkie 3 collaborations

Anne Goriely 3 collaborations

Daria Lazic 2 collaborations

Florian Halbritter 2 collaborations

Andrea Bileck 2 collaborations

Inge M Ambros 2 collaborations

Christopher Gerner 2 collaborations

Irfete S Fetahu 2 collaborations

Eva Bozsaky 2 collaborations

Marcus Tötzl 2 collaborations

Magdalena Rados 2 collaborations

Wolfgang Weninger 2 collaborations

Eleni M Tomazou 2 collaborations

Christoph Bock 2 collaborations

Matthias Farlik 2 collaborations

Heidrun Boztug 2 collaborations

Gernot Engstler 2 collaborations

Gaelle Pierron 2 collaborations

Eve Lapouble 2 collaborations

Gudrun Schleiermacher 2 collaborations

Olivier Delattre 2 collaborations

Ulrike Pötschger 2 collaborations

Louis Chesler 2 collaborations

Raphael Koch 2 collaborations

Lianne Haveman 2 collaborations

Henk van den Berg 2 collaborations

Wolf Hassenpflug 2 collaborations

Anna Raciborska 2 collaborations

Torben Ek 2 collaborations

Daniel Baumhoer 2 collaborations

Gerlinde Egerer 2 collaborations

Marleen Renard 2 collaborations

Peter Hauser 2 collaborations

Stefan Burdach 2 collaborations

Peter Reichardt 2 collaborations

Jarmila Kruseova 2 collaborations

Thomas Kühne 2 collaborations

Torsten Kessler 2 collaborations

Trude Butterfaß-Bahloul 2 collaborations

Catharina Dhooge 2 collaborations

Sebastian Bauer 2 collaborations

János Kiss 2 collaborations

Michael Paulussen 2 collaborations

Fiona Bonar 2 collaborations

Andreas Ranft 2 collaborations

Beate Timmermann 2 collaborations

Jelena Rascon 2 collaborations

Volker Vieth 2 collaborations

Jukka Kanerva 2 collaborations

Andreas Faldum 2 collaborations

Wolfgang Hartmann 2 collaborations

Lars Hjorth 2 collaborations

Hans Gelderblom 2 collaborations

Florian Kromp 1 collaboration

Peter Repiscak 1 collaboration

Michael Kirr 1 collaboration

Filip Mivalt 1 collaboration

Marek Ussowicz 1 collaboration

Christian Ostalecki 1 collaboration

Wolfgang Esser-Skala 1 collaboration

Rohit Dnyansagar 1 collaboration

Samuel Sindelar 1 collaboration

Lukas Skos 1 collaboration

Lisa Shaw 1 collaboration

Dora Tarlungeanu 1 collaboration

Nikolaus Fortelny 1 collaboration

Alicia Baumgartner 1 collaboration

Natalia Stepien 1 collaboration

Lisa Mayr 1 collaboration

Sibylle Madlener 1 collaboration

Christian Dorfer 1 collaboration

Maria T Schmook 1 collaboration

Tatjana Traub-Weidinger 1 collaboration

Daniela Lötsch-Gojo 1 collaboration

Dominik Kirchhofer 1 collaboration

Dominik Reisinger 1 collaboration

Cora Hedrich 1 collaboration

Saleha Arshad 1 collaboration

Stefan Irschik 1 collaboration

Christoph Höller 1 collaboration

Irene Slavc 1 collaboration

Walter Berger 1 collaboration

Leonhard Müllauer 1 collaboration

Christine Haberler 1 collaboration

Amedeo A Azizi 1 collaboration

Andreas Peyrl 1 collaboration

Johannes Gojo 1 collaboration

Peter Peneder 1 collaboration

Adrian M Stütz 1 collaboration

Didier Surdez 1 collaboration

Manuela Krumbholz 1 collaboration

Sabine Semper 1 collaboration

Mathieu Chicard 1 collaboration

Nathan C Sheffield 1 collaboration

Bekir Ergüner 1 collaboration

Daniele Barreca 1 collaboration

André F Rendeiro 1 collaboration

Abbas Agaimy 1 collaboration

Michael Dworzak 1 collaboration

Ola Myklebost 1 collaboration

Perrine Marec-Bérard 1 collaboration

Susan Ann Burchill 1 collaboration

Bernadette Brennan 1 collaboration

Sandra J Strauss 1 collaboration

Jeremy Whelan 1 collaboration

Christiane Schaefer 1 collaboration

Caroline Hutter 1 collaboration

Kjetil Boye 1 collaboration

Ingrid M Saldana-Guerrero 1 collaboration

Luis F Montano-Gutierrez 1 collaboration

Katy Boswell 1 collaboration

Christoph Hafemeister 1 collaboration

Evon Poon 1 collaboration

Lisa E Shaw 1 collaboration

Dylan Stavish 1 collaboration

Rebecca A Lea 1 collaboration

Sara Wernig-Zorc 1 collaboration

Peter Zoescher 1 collaboration

Andrea Wenninger-Weinzierl 1 collaboration

Caterina Sturtzel 1 collaboration

Celine Souilhol 1 collaboration

Sophia Tarelli 1 collaboration

Mohamed R Shoeb 1 collaboration

Polyxeni Bozatzi 1 collaboration

Maria Guarini 1 collaboration

Michelle C Buri 1 collaboration

Eva M Putz 1 collaboration

Miller Huang 1 collaboration

Peter W Andrews 1 collaboration

Ivana Barbaric 1 collaboration

George D Cresswell 1 collaboration

Helen E Bryant 1 collaboration

Martin Distel 1 collaboration

Anestis Tsakiridis 1 collaboration

Angela Bellini 1 collaboration

Virginie Bernard 1 collaboration

Sylvain Baulande 1 collaboration

Nathalie Auger 1 collaboration

Klaus Beiske 1 collaboration

David R Betts 1 collaboration

Jaydutt Bhalshankar 1 collaboration

Nick Bown 1 collaboration

Katleen de Preter 1 collaboration

Nathalie Clément 1 collaboration

Valérie Combaret 1 collaboration

Jaime Font de Mora 1 collaboration

Sally L George 1 collaboration

Irene Jiménez 1 collaboration

Marta Jeison 1 collaboration

Barbara Marques 1 collaboration

Tommy Martinsson 1 collaboration

Katia Mazzocco 1 collaboration

Martina Morini 1 collaboration

Annick Mühlethaler-Mottet 1 collaboration

Rosa Noguera 1 collaboration

Maria Rossing 1 collaboration

Nadine Van Roy 1 collaboration

Ales Vicha 1 collaboration

Walentyna Balwierz 1 collaboration

Victoria Castel 1 collaboration

Martin Elliott 1 collaboration

Per Kogner 1 collaboration

Geneviève Laureys 1 collaboration

Roberto Luksch 1 collaboration

Josef Malis 1 collaboration

Maja Popovic-Beck 1 collaboration

Shifra Ash 1 collaboration

Dominique Valteau-Couanet 1 collaboration

Deborah A Tweddle 1 collaboration

Lisa-Marie Muellerleile 1 collaboration

Michael Bernkopf 1 collaboration

Michael Wambacher 1 collaboration

Barbara Nell 1 collaboration

Ummi B Abdullah 1 collaboration

Stephen J Bush 1 collaboration

Katherine A Wood 1 collaboration

Sahar Ghaffari 1 collaboration

Eleni Giannoulatou 1 collaboration

Loïc M Thibaut 1 collaboration

Jonathan Williams 1 collaboration

Edward M Blair 1 collaboration

Fiona Blanco Kelly 1 collaboration

Angela Bloss 1 collaboration

Emma Burkitt-Wright 1 collaboration

Natalie Canham 1 collaboration

Alexander T Deng 1 collaboration

Abhijit Dixit 1 collaboration

Jacqueline Eason 1 collaboration

Frances Elmslie 1 collaboration

Alice Gardham 1 collaboration

Eleanor Hay 1 collaboration

Muriel Holder 1 collaboration

Tessa Homfray 1 collaboration

Jane A Hurst 1 collaboration

Diana Johnson 1 collaboration

Wendy D Jones 1 collaboration

Usha Kini 1 collaboration

Emma Kivuva 1 collaboration

Ajith Kumar 1 collaboration

Melissa M Lees 1 collaboration

Harry G Leitch 1 collaboration

Jenny E V Morton 1 collaboration

Andrea H Németh 1 collaboration

Shwetha Ramachandrappa 1 collaboration

Katherine Saunders 1 collaboration

Deborah J Shears 1 collaboration

Lucy Side 1 collaboration

Miranda Splitt 1 collaboration

Alison Stewart 1 collaboration

Helen Stewart 1 collaboration

Mohnish Suri 1 collaboration

Penny Clouston 1 collaboration

Robert W Davies 1 collaboration

Bénédicte Brichard 1 collaboration

Heribert Juergens 1 collaboration

Soňa Cyprová 1 collaboration

Leo Kager 1 collaboration

Judith V M G Bovee 1 collaboration

Angela M Hong 1 collaboration

Arne Streitbürger 1 collaboration

Vivek A Bhadri 1 collaboration

Eduardo Calpena 1 collaboration

Kerry A Miller 1 collaboration

Hannah K Ralph 1 collaboration

Felix Schriegel 1 collaboration

Uwe Grunwald 1 collaboration

Nikolai Siebert 1 collaboration

Inge Ambros 1 collaboration

Holger N Lode 1 collaboration

Guenter Henze 1 collaboration

Karoline Ehlert 1 collaboration

Marvin L Meistrich 1 collaboration

Benedicte Brichard 1 collaboration

Heribert Jürgens 1 collaboration

Sona Cyprova 1 collaboration

Hans Theodor Eich 1 collaboration

Judith Bovee 1 collaboration

Jendrik Hardes 1 collaboration

Stephane Collaud 1 collaboration

Angela Hong 1 collaboration

Vivek Bhadri 1 collaboration

Joshua T Lange 1 collaboration

John C Rose 1 collaboration

Celine Y Chen 1 collaboration

Yuriy Pichugin 1 collaboration

Liangqi Xie 1 collaboration

Jun Tang 1 collaboration

King L Hung 1 collaboration

Kathryn E Yost 1 collaboration

Quanming Shi 1 collaboration

Marcella L Erb 1 collaboration

Utkrisht Rajkumar 1 collaboration

Sihan Wu 1 collaboration

Charles Swanton 1 collaboration

Zhe Liu 1 collaboration

Weini Huang 1 collaboration

Howard Y Chang 1 collaboration

Vineet Bafna 1 collaboration

Anton G Henssen 1 collaboration

Benjamin Werner 1 collaboration

Paul S Mischel 1 collaboration