Maria Poptsova

Affiliations

Laboratory of Bioinformatics, Faculty of Computer Science, National Research University Higher School of Economics, Moscow, Russia.

Publications (14)

Z-RNA and the Flipside of the SARS Nsp13 Helicase: Is There a Role for Flipons in Coronavirus-Induced Pathology?

Frontiers in immunology

Avec: Alan Herbert , Maria Poptsova

Unsupervised domain adaptation methods for cross-species transfer of regulatory code signals.

Frontiers in big data

Avec: Pavel Latyshev , Fedor Pavlov , Alan Herbert , Maria Poptsova

Tissue-specific impact of stem-loops and quadruplexes on cancer breakpoints formation.

BMC cancer

Avec: Kseniia Cheloshkina , Maria Poptsova

ADAR1 masks the cancer immunotherapeutic promise of ZBP1-driven necroptosis.

Nature

Avec: Ting Zhang , Chaoran Yin , Aleksandr Fedorov , Liangjun Qiao , Hongliang Bao , Nazar Beknazarov , Shiyu Wang , Avishekh Gautam , Riley M Williams , Jeremy Chase Crawford , Suraj Peri , Vasily Studitsky , Amer A Beg , Paul G Thomas , Carl Walkley , Yan Xu , Maria Poptsova , Alan Herbert , Siddharth Balachandran

Z-DNA formation in promoters conserved between human and mouse are associated with increased transcription reinitiation rates.

Scientific reports

Avec: Nazar Beknazarov , Dmitry Konovalov , Alan Herbert , Maria Poptsova

Deep learning approach for predicting functional Z-DNA regions using omics data.

Scientific reports

Avec: Nazar Beknazarov , Seungmin Jin , Maria Poptsova

Mono a Mano: ZBP1's Love-Hate Relationship with the Kissing Virus.

International journal of molecular sciences

Avec: Alan Herbert , Aleksandr Fedorov , Maria Poptsova

DeepZ: A Deep Learning Approach for Z-DNA Prediction.

Methods in molecular biology (Clifton, N.J.)

Avec: Nazar Beknazarov , Maria Poptsova

Recognition of 3'-end L1, Alu, processed pseudogenes, and mRNA stem-loops in the human genome using sequence-based and structure-based machine-learning models.

Scientific reports

Avec: Alexander Shein , Anton Zaikin , Maria Poptsova

Comprehensive analysis of cancer breakpoints reveals signatures of genetic and epigenetic contribution to cancer genome rearrangements.

PLoS computational biology

Avec: Kseniia Cheloshkina , Maria Poptsova

Special Issue: A, B and Z: The Structure, Function and Genetics of Z-DNA and Z-RNA.

International journal of molecular sciences

Avec: Alan Herbert , Sergey Karapetyan , Maria Poptsova , Karen M Vasquez , Quentin Vicens , Beat Vögeli

Z-flipon variants reveal the many roles of Z-DNA and Z-RNA in health and disease.

Life science alliance

Avec: Dmitry Umerenkov , Alan Herbert , Dmitrii Konovalov , Anna Danilova , Nazar Beknazarov , Vladimir Kokh , Aleksandr Fedorov , Maria Poptsova

Conserved microRNAs and Flipons Shape Gene Expression during Development by Altering Promoter Conformations.

International journal of molecular sciences

Avec: Alan Herbert , Fedor Pavlov , Dmitrii Konovalov , Maria Poptsova

Machine learning models for predicting risks of MACEs for myocardial infarction patients with different VEGFR2 genotypes.

Frontiers in medicine

Avec: Alexander Kirdeev , Konstantin Burkin , Anton Vorobev , Elena Zbirovskaya , Galina Lifshits , Konstantin Nikolaev , Elena Zelenskaya , Maxim Donnikov , Lyudmila Kovalenko , Irina Urvantseva , Maria Poptsova

Réseau de co-auteurs

Alan Herbert 8 collaborations

Nazar Beknazarov 5 collaborations

Aleksandr Fedorov 3 collaborations

Fedor Pavlov 2 collaborations

Kseniia Cheloshkina 2 collaborations

Dmitrii Konovalov 2 collaborations

Pavel Latyshev 1 collaboration

Ting Zhang 1 collaboration

Chaoran Yin 1 collaboration

Liangjun Qiao 1 collaboration

Hongliang Bao 1 collaboration

Shiyu Wang 1 collaboration

Avishekh Gautam 1 collaboration

Riley M Williams 1 collaboration

Jeremy Chase Crawford 1 collaboration

Suraj Peri 1 collaboration

Vasily Studitsky 1 collaboration

Amer A Beg 1 collaboration

Paul G Thomas 1 collaboration

Carl Walkley 1 collaboration

Yan Xu 1 collaboration

Siddharth Balachandran 1 collaboration

Dmitry Konovalov 1 collaboration

Seungmin Jin 1 collaboration

Alexander Shein 1 collaboration

Anton Zaikin 1 collaboration

Sergey Karapetyan 1 collaboration

Karen M Vasquez 1 collaboration

Quentin Vicens 1 collaboration

Beat Vögeli 1 collaboration

Dmitry Umerenkov 1 collaboration

Anna Danilova 1 collaboration

Vladimir Kokh 1 collaboration

Alexander Kirdeev 1 collaboration

Konstantin Burkin 1 collaboration

Anton Vorobev 1 collaboration

Elena Zbirovskaya 1 collaboration

Galina Lifshits 1 collaboration

Konstantin Nikolaev 1 collaboration

Elena Zelenskaya 1 collaboration

Maxim Donnikov 1 collaboration

Lyudmila Kovalenko 1 collaboration

Irina Urvantseva 1 collaboration