Mahdi Moqri

Affiliations

Biomedical Informatics Program, Department of Biomedical Data Science, Stanford University, Stanford, CA, 94305, USA.

Publications (13)

Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm.

Genome biology

Avec: Andrea Cipriano , Alessio Colantoni , Alessandro Calicchio , Jonathan Fiorentino , Danielle Gomes , Mahdi Moqri , Alexander Parker , Sajede Rasouli , Matthew Caldwell , Francesca Briganti , Maria Grazia Roncarolo , Antonio Baldini , Katja G Weinacht , Gian Gaetano Tartaglia , Vittorio Sebastiano

High-dimensional Ageome Representations of Biological Aging across Functional Modules.

bioRxiv : the preprint server for biology

Avec: Kejun Ying , Alexander Tyshkovskiy , Qingwen Chen , Eric Latorre-Crespo , Bohan Zhang , Hanna Liu , Benyamin Matei-Dediu , Jesse R Poganik , Mahdi Moqri , Kristina Kirschne , Jessica Lasky-Su , Vadim N Gladyshev

Biomarkers of aging for the identification and evaluation of longevity interventions.

Cell

Avec: Mahdi Moqri , Chiara Herzog , Jesse R Poganik , Auteur inconnu , Jamie Justice , Daniel W Belsky , Albert Higgins-Chen , Alexey Moskalev , Georg Fuellen , Alan A Cohen , Ivan Bautmans , Martin Widschwendter , Jingzhong Ding , Alexander Fleming , Joan Mannick , Jing-Dong Jackie Han , Alex Zhavoronkov , Nir Barzilai , Matt Kaeberlein , Steven Cummings , Brian K Kennedy , Luigi Ferrucci , Steve Horvath , Eric Verdin , Andrea B Maier , Michael P Snyder , Vittorio Sebastiano , Vadim N Gladyshev

Depletion of loss-of-function germline mutations in centenarians reveals longevity genes.

Nature communications

Avec: Kejun Ying , José P Castro , Anastasia V Shindyapina , Alexander Tyshkovskiy , Mahdi Moqri , Ludger J E Goeminne , Sofiya Milman , Zhengdong D Zhang , Nir Barzilai , Vadim N Gladyshev

E-CatBoost: An efficient machine learning framework for predicting ICU mortality using the eICU Collaborative Research Database.

PloS one

Avec: Nima Safaei , Babak Safaei , Seyedhouman Seyedekrami , Mojtaba Talafidaryani , Arezoo Masoud , Shaodong Wang , Qing Li , Mahdi Moqri

Dynamic lipidome alterations associated with human health, disease and ageing.

Nature metabolism

Avec: Daniel Hornburg , Si Wu , Mahdi Moqri , Xin Zhou , Kevin Contrepois , Nasim Bararpour , Gavin M Traber , Baolong Su , Ahmed A Metwally , Monica Avina , Wenyu Zhou , Jessalyn M Ubellacker , Tejaswini Mishra , Sophia Miryam Schüssler-Fiorenza Rose , Paula B Kavathas , Kevin J Williams , Michael P Snyder

Validation of biomarkers of aging.

Nature medicine

Avec: Mahdi Moqri , Chiara Herzog , Jesse R Poganik , Kejun Ying , Jamie N Justice , Daniel W Belsky , Albert T Higgins-Chen , Brian H Chen , Alan A Cohen , Georg Fuellen , Sara Hägg , Riccardo E Marioni , Martin Widschwendter , Kristen Fortney , Peter O Fedichev , Alex Zhavoronkov , Nir Barzilai , Jessica Lasky-Su , Douglas P Kiel , Brian K Kennedy , Steven Cummings , P Eline Slagboom , Eric Verdin , Andrea B Maier , Vittorio Sebastiano , Michael P Snyder , Vadim N Gladyshev , Steve Horvath , Luigi Ferrucci

PRC2-AgeIndex as a universal biomarker of aging and rejuvenation.

Nature communications

Avec: Mahdi Moqri , Andrea Cipriano , Daniel J Simpson , Sajede Rasouli , Tara Murty , Tineke Anna de Jong , Daniel Nachun , Guilherme de Sena Brandine , Kejun Ying , Andrei Tarkhov , Karolina A Aberg , Edwin van den Oord , Wanding Zhou , Andrew Smith , Crystal Mackall , Vadim N Gladyshev , Steve Horvath , Michael P Snyder , Vittorio Sebastiano

OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.

bioRxiv : the preprint server for biology

Avec: Qingwen Chen , Varun B Dwaraka , Natàlia Carreras-Gallo , Kevin Mendez , Yulu Chen , Sofina Begum , Priyadarshini Kachroo , Nicole Prince , Hannah Went , Tavis Mendez , Aaron Lin , Logan Turner , Mahdi Moqri , Su H Chu , Rachel S Kelly , Scott T Weiss , Nicholas J W Rattray , Vadim N Gladyshev , Elizabeth Karlson , Craig Wheelock , Ewy A Mathé , Amber Dahlin , Michae J McGeachie , Ryan Smith , Jessica A Lasky-Su

Causality-enriched epigenetic age uncouples damage and adaptation.

Nature aging

Avec: Kejun Ying , Hanna Liu , Andrei E Tarkhov , Marie C Sadler , Ake T Lu , Mahdi Moqri , Steve Horvath , Zoltán Kutalik , Xia Shen , Vadim N Gladyshev

Mechanisms, pathways and strategies for rejuvenation through epigenetic reprogramming.

Nature aging

Avec: Andrea Cipriano , Mahdi Moqri , Sun Y Maybury-Lewis , Ryan Rogers-Hammond , Tineke Anna de Jong , Alexander Parker , Sajede Rasouli , Hans Robert Schöler , David A Sinclair , Vittorio Sebastiano

Nature of epigenetic aging from a single-cell perspective.

Nature aging

Avec: Andrei E Tarkhov , Thomas Lindstrom-Vautrin , Sirui Zhang , Kejun Ying , Mahdi Moqri , Bohan Zhang , Alexander Tyshkovskiy , Orr Levy , Vadim N Gladyshev

Challenges and recommendations for the translation of biomarkers of aging.

Nature aging

Avec: Auteur inconnu , Chiara M S Herzog , Ludger J E Goeminne , Jesse R Poganik , Nir Barzilai , Daniel W Belsky , Joe Betts-LaCroix , Brian H Chen , Michelle Chen , Alan A Cohen , Steven R Cummings , Peter O Fedichev , Luigi Ferrucci , Alexander Fleming , Kristen Fortney , David Furman , Vera Gorbunova , Albert Higgins-Chen , Lee Hood , Steve Horvath , Jamie N Justice , Douglas P Kiel , George A Kuchel , Jessica Lasky-Su , Nathan K LeBrasseur , Andrea B Maier , Birgit Schilling , Vittorio Sebastiano , P Eline Slagboom , Michael P Snyder , Eric Verdin , Martin Widschwendter , Alex Zhavoronkov , Mahdi Moqri , Vadim N Gladyshev

Réseau de co-auteurs

Vadim N Gladyshev 9 collaborations

Vittorio Sebastiano 6 collaborations

Kejun Ying 6 collaborations

Steve Horvath 5 collaborations

Michael P Snyder 5 collaborations

Jesse R Poganik 4 collaborations

Nir Barzilai 4 collaborations

Andrea Cipriano 3 collaborations

Sajede Rasouli 3 collaborations

Alexander Tyshkovskiy 3 collaborations

Jessica Lasky-Su 3 collaborations

Daniel W Belsky 3 collaborations

Alan A Cohen 3 collaborations

Martin Widschwendter 3 collaborations

Alex Zhavoronkov 3 collaborations

Luigi Ferrucci 3 collaborations

Eric Verdin 3 collaborations

Andrea B Maier 3 collaborations

Alexander Parker 2 collaborations

Qingwen Chen 2 collaborations

Bohan Zhang 2 collaborations

Hanna Liu 2 collaborations

Chiara Herzog 2 collaborations

None None 2 collaborations

Albert Higgins-Chen 2 collaborations

Georg Fuellen 2 collaborations

Alexander Fleming 2 collaborations

Steven Cummings 2 collaborations

Brian K Kennedy 2 collaborations

Ludger J E Goeminne 2 collaborations

Jamie N Justice 2 collaborations

Brian H Chen 2 collaborations

Kristen Fortney 2 collaborations

Peter O Fedichev 2 collaborations

Douglas P Kiel 2 collaborations

P Eline Slagboom 2 collaborations

Tineke Anna de Jong 2 collaborations

Andrei E Tarkhov 2 collaborations

Alessio Colantoni 1 collaboration

Alessandro Calicchio 1 collaboration

Jonathan Fiorentino 1 collaboration

Danielle Gomes 1 collaboration

Matthew Caldwell 1 collaboration

Francesca Briganti 1 collaboration

Maria Grazia Roncarolo 1 collaboration

Antonio Baldini 1 collaboration

Katja G Weinacht 1 collaboration

Gian Gaetano Tartaglia 1 collaboration

Eric Latorre-Crespo 1 collaboration

Benyamin Matei-Dediu 1 collaboration

Kristina Kirschne 1 collaboration

Jamie Justice 1 collaboration

Alexey Moskalev 1 collaboration

Ivan Bautmans 1 collaboration

Jingzhong Ding 1 collaboration

Joan Mannick 1 collaboration

Jing-Dong Jackie Han 1 collaboration

Matt Kaeberlein 1 collaboration

José P Castro 1 collaboration

Anastasia V Shindyapina 1 collaboration

Sofiya Milman 1 collaboration

Zhengdong D Zhang 1 collaboration

Nima Safaei 1 collaboration

Babak Safaei 1 collaboration

Seyedhouman Seyedekrami 1 collaboration

Mojtaba Talafidaryani 1 collaboration

Arezoo Masoud 1 collaboration

Shaodong Wang 1 collaboration

Qing Li 1 collaboration

Daniel Hornburg 1 collaboration

Si Wu 1 collaboration

Xin Zhou 1 collaboration

Kevin Contrepois 1 collaboration

Nasim Bararpour 1 collaboration

Gavin M Traber 1 collaboration

Baolong Su 1 collaboration

Ahmed A Metwally 1 collaboration

Monica Avina 1 collaboration

Wenyu Zhou 1 collaboration

Jessalyn M Ubellacker 1 collaboration

Tejaswini Mishra 1 collaboration

Sophia Miryam Schüssler-Fiorenza Rose 1 collaboration

Paula B Kavathas 1 collaboration

Kevin J Williams 1 collaboration

Albert T Higgins-Chen 1 collaboration

Sara Hägg 1 collaboration

Riccardo E Marioni 1 collaboration

Daniel J Simpson 1 collaboration

Tara Murty 1 collaboration

Daniel Nachun 1 collaboration

Guilherme de Sena Brandine 1 collaboration

Andrei Tarkhov 1 collaboration

Karolina A Aberg 1 collaboration

Edwin van den Oord 1 collaboration

Wanding Zhou 1 collaboration

Andrew Smith 1 collaboration

Crystal Mackall 1 collaboration

Varun B Dwaraka 1 collaboration

Natàlia Carreras-Gallo 1 collaboration

Kevin Mendez 1 collaboration

Yulu Chen 1 collaboration

Sofina Begum 1 collaboration

Priyadarshini Kachroo 1 collaboration

Nicole Prince 1 collaboration

Hannah Went 1 collaboration

Tavis Mendez 1 collaboration

Aaron Lin 1 collaboration

Logan Turner 1 collaboration

Su H Chu 1 collaboration

Rachel S Kelly 1 collaboration

Scott T Weiss 1 collaboration

Nicholas J W Rattray 1 collaboration

Elizabeth Karlson 1 collaboration

Craig Wheelock 1 collaboration

Ewy A Mathé 1 collaboration

Amber Dahlin 1 collaboration

Michae J McGeachie 1 collaboration

Ryan Smith 1 collaboration

Jessica A Lasky-Su 1 collaboration

Marie C Sadler 1 collaboration

Ake T Lu 1 collaboration

Zoltán Kutalik 1 collaboration

Xia Shen 1 collaboration

Sun Y Maybury-Lewis 1 collaboration

Ryan Rogers-Hammond 1 collaboration

Hans Robert Schöler 1 collaboration

David A Sinclair 1 collaboration

Thomas Lindstrom-Vautrin 1 collaboration

Sirui Zhang 1 collaboration

Orr Levy 1 collaboration

Chiara M S Herzog 1 collaboration

Joe Betts-LaCroix 1 collaboration

Michelle Chen 1 collaboration

Steven R Cummings 1 collaboration

David Furman 1 collaboration

Vera Gorbunova 1 collaboration

Lee Hood 1 collaboration

George A Kuchel 1 collaboration

Nathan K LeBrasseur 1 collaboration

Birgit Schilling 1 collaboration