Luigi Marchionni

Affiliations

Departments of Ophthalmology and Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland (MD), USA.

Publications (24)

Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma.

Acta neuropathologica communications

Avec: Antje Arnold , Eddie Luidy Imada , M Lisa Zhang , Deepak P Edward , Luigi Marchionni , Fausto J Rodriguez

Genetic Analysis of Small Well-differentiated Pancreatic Neuroendocrine Tumors Identifies Subgroups With Differing Risks of Liver Metastases.

Annals of surgery

Avec: Antonio Pea , Jun Yu , Luigi Marchionni , Michael Noe , Claudio Luchini , Alessandra Pulvirenti , Roeland F de Wilde , Lodewijk A Brosens , Neda Rezaee , Ammar Javed , Peter Chianchiano , Stefano Gobbo , Paolo Regi , Roberto Salvia , Claudio Bassi , Jin He , Matthew J Weiss , John L Cameron , G Johan A Offerhaus , Ralph H Hruban , Rita T Lawlor , Aldo Scarpa , Christopher M Heaphy , Laura D Wood , Christopher L Wolfgang

The Journal of urology

Avec: Nora M Haney , Farzana A Faisal , Jiayun Lu , Liana B Guedes , Victor E Reuter , Howard I Scher , James A Eastham , Luigi Marchionni , Corinne Joshu , Anuradha Gopalan , Tamara L Lotan

Cancer prevention research (Philadelphia, Pa.)

Avec: Rafael Guerrero-Preston , Fahcina Lawson , Sebastian Rodriguez-Torres , Maartje G Noordhuis , Francesca Pirini , Laura Manuel , Blanca L Valle , Tal Hadar , Bianca Rivera , Oluwasina Folawiyo , Adriana Baez , Luigi Marchionni , Wayne M Koch , William H Westra , Young J Kim , James R Eshleman , David Sidransky

Host Blood Gene Signatures Can Detect the Progression to Severe and Cerebral Malaria.

Frontiers in cellular and infection microbiology

Avec: Mohamed Omar , Luigi Marchionni , Georg Häcker , Mohamed Tarek Badr

A robust and interpretable gene signature for predicting the lymph node status of primary T1/T2 oral cavity squamous cell carcinoma.

International journal of cancer

Avec: Yasmin Ghantous , Mohamed Omar , Esther Channah Broner , Nishant Agrawal , Alexander T Pearson , Ari J Rosenberg , Vasudha Mishra , Alka Singh , Imad Abu El-Naaj , Peter A Savage , David Sidransky , Luigi Marchionni , Evgeny Izumchenko

Distinct mesenchymal cell states mediate prostate cancer progression.

Nature communications

Avec: Hubert Pakula , Mohamed Omar , Ryan Carelli , Filippo Pederzoli , Giuseppe Nicolò Fanelli , Tania Pannellini , Fabio Socciarelli , Lucie Van Emmenis , Silvia Rodrigues , Caroline Fidalgo-Ribeiro , Pier Vitale Nuzzo , Nicholas J Brady , Wikum Dinalankara , Madhavi Jere , Itzel Valencia , Christopher Saladino , Jason Stone , Caitlin Unkenholz , Richard Garner , Mohammad K Alexanderani , Francesca Khani , Francisca Nunes de Almeida , Cory Abate-Shen , Matthew B Greenblatt , David S Rickman , Christopher E Barbieri , Brian D Robinson , Luigi Marchionni , Massimo Loda

A Phase 1 Trial of Durvalumab in Combination with Bacillus Calmette-Guerin (BCG) or External Beam Radiation Therapy in Patients with BCG-unresponsive Non-muscle-Invasive Bladder Cancer: The Hoosier Cancer Research Network GU16-243 ADAPT-BLADDER Study.

European urology

Avec: Noah M Hahn , Michael A O'Donnell , Jason A Efstathiou , Marianna Zahurak , Gary L Rosner , Jeff Smith , Max R Kates , Trinity J Bivalacqua , Phuoc T Tran , Daniel Y Song , Alex S Baras , Andres Matoso , Woonyoung Choi , Kellie N Smith , Drew M Pardoll , Luigi Marchionni , Bridget McGuire , Mary Grace Phelan , Burles A Johnson , Tanya O'Neal , David J McConkey , Tracy L Rose , Marc Bjurlin , Emerson A Lim , Charles G Drake , James M McKiernan , Israel Deutsch , Christopher B Anderson , Donald L Lamm , Daniel M Geynisman , Elizabeth R Plimack , Mark A Hallman , Eric M Horwitz , Essel Al-Saleem , David Y T Chen , Richard E Greenberg , Alexander Kutikov , Gordon Guo , Timothy A Masterson , Nabil Adra , Hristos Z Kaimakliotis

Using biological constraints to improve prediction in precision oncology.

iScience

Avec: Mohamed Omar , Wikum Dinalankara , Lotte Mulder , Tendai Coady , Claudio Zanettini , Eddie Luidy Imada , Laurent Younes , Donald Geman , Luigi Marchionni

Machine learning predicts conventional imaging metastasis-free survival (MFS) for oligometastatic castration-sensitive prostate cancer (omCSPC) using prostate-specific membrane antigen (PSMA) PET radiomics.

Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology

Avec: Yufeng Cao , Philip Sutera , William Silva Mendes , Bardia Yousefi , Tom Hrinivich , Matthew Deek , Ryan Phillips , Danny Song , Ana Kiess , Ozan Cem Guler , Nese Torun , Mehmet Reyhan , Amit Sawant , Luigi Marchionni , Nicole L Simone , Phuoc Tran , Cem Onal , Lei Ren

An R package for divergence analysis of omics data.

PloS one

Avec: Wikum Dinalankara , Qian Ke , Donald Geman , Luigi Marchionni

Hedgehog/GLI1 activation leads to leukemic transformation of myelodysplastic syndrome in vivo and GLI1 inhibition results in antitumor activity.

Oncogene

Avec: Bonnie W Lau , Kyounghee Huh , Rafael Madero-Marroquin , Federico De Marchi , Yiting Lim , Qiuju Wang , Francisco Lobo , Luigi Marchionni , Douglas B Smith , Amy DeZern , Mark J Levis , Peter D Aplan , William Matsui , Lukasz P Gondek

CDK12 inactivation across solid tumors: an actionable genetic subtype.

Oncoscience

Avec: Catherine H Marshall , Eddie L Imada , Zhuojun Tang , Luigi Marchionni , Emmanuel S Antonarakis

Correction to: Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma.

Acta neuropathologica communications

Avec: Antje Arnold , Eddie Luidy Imada , M Lisa Zhang , Deepak P Edward , Luigi Marchionni , Fausto J Rodriguez

Global microRNA profiling identified miR-10b-5p as a regulator of neurofibromatosis 1 (NF1)-glioma migration.

Neuropathology and applied neurobiology

Avec: J S Nix , M Yuan , E L Imada , H Ames , L Marchionni , D H Gutmann , F J Rodriguez

Recounting the FANTOM CAGE-Associated Transcriptome.

Genome research

Avec: Eddie Luidy Imada , Diego Fernando Sanchez , Leonardo Collado-Torres , Christopher Wilks , Tejasvi Matam , Wikum Dinalankara , Aleksey Stupnikov , Francisco Lobo-Pereira , Chi-Wai Yip , Kayoko Yasuzawa , Naoto Kondo , Masayoshi Itoh , Harukazu Suzuki , Takeya Kasukawa , Chung-Chau Hon , Michiel J L de Hoon , Jay W Shin , Piero Carninci , Andrew E Jaffe , Jeffrey T Leek , Alexander Favorov , Gloria R Franco , Ben Langmead , Luigi Marchionni

Precision health diagnostic and surveillance network uses S gene target failure (SGTF) combined with sequencing technologies to track emerging SARS-CoV-2 variants.

Immunity, inflammation and disease

Avec: Rafael Guerrero-Preston , Vanessa Rivera-Amill , Karem Caraballo , Sebastian Rodríguez-Torres , Ana Purcell-Wiltz , Andrea A García , Raphael S Torres , Fernando T Zamuner , Claudio Zanettini , Matthew J MacKay , Rachel Baits , Daisy Salgado , Gaurav Khullar , Jessica Metti , Timothy Baker , Joel Dudley , Keilyn Vale , Gabriela Pérez , Lorena De Jesús , Yaima Miranda , Denise Ortiz , Amanda García-Negrón , Liliana Viera , Alberto Ortiz , Jorge A Canabal , Josefina Romaguera , Ivonne Jiménez-Velázquez , Luigi Marchionni , José F Rodríguez-Orengo , Adriana Baez , Christopher E Mason , David Sidransky

Genomic Determinants Associated with Modes of Progression and Patterns of Failure in Metachronous Oligometastatic Castration-sensitive Prostate Cancer.

European urology oncology

Avec: Philip Sutera , Yang Song , Amol C Shetty , Keara English , Kim Van der Eecken , Ozan Cem Guler , Jarey Wang , Yufeng Cao , Soha Bazyar , Sofie Verbeke , Jo Van Dorpe , Valérie Fonteyne , Bram De Laere , Mark Mishra , Zaker Rana , Jason Molitoris , Matthew Ferris , Ana Kiess , Daniel Y Song , Theodore DeWeese , Kenneth J Pienta , Christopher Barbieri , Luigi Marchionni , Lei Ren , Amit Sawant , Nicole Simone , Alejandro Berlin , Cem Onal , Phuoc T Tran , Piet Ost , Matthew P Deek

A FOXO1-dependent transcription network is a targetable vulnerability of mantle cell lymphomas.

The Journal of clinical investigation

Avec: Ja-Young Jang , Inah Hwang , Heng Pan , Jun Yao , Lapo Alinari , Eddie Imada , Claudio Zanettini , Michael J Kluk , Yizhe Wang , Yunkyoung Lee , Hua V Lin , Xiangao Huang , Maurizio Di Liberto , Zhengming Chen , Karla V Ballman , Lewis C Cantley , Luigi Marchionni , Giorgio Inghirami , Olivier Elemento , Robert A Baiocchi , Selina Chen-Kiang , Sandro Belvedere , Hongwu Zheng , Jihye Paik

Donor-derived acute myeloid leukemia in solid organ transplantation.

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons

Avec: Luigi Marchionni , Francisco Pereira Lobo , Rumen Kostadinov , Anna Serra , Federico Genzano Besso , Silvia Deaglio , Piero Stratta , Monica Berrino , Claudio Zanettini , Eddie Luidy Imada , Mohamed N Omar , Gianluca Gaidano , Benedetto Bruno , Giuseppe Saglio , Antonio Amoroso

Tumor-Specific CD8

bioRxiv : the preprint server for biology

Avec: Elizabeth M Zawidzka , Luca Biavati , Amy Thomas , Claudio Zanettini , Luigi Marchionni , Robert Leone , Ivan Borrello

MultiNEP: a multi-omics network enhancement framework for prioritizing disease genes and metabolites simultaneously.

Bioinformatics (Oxford, England)

Avec: Zhuoran Xu , Luigi Marchionni , Shuang Wang

Notch-based gene signature for predicting the response to neoadjuvant chemotherapy in triple-negative breast cancer.

Journal of translational medicine

Avec: Mohamed Omar , Pier Vitale Nuzzo , Francesco Ravera , Sara Bleve , Giuseppe Nicolò Fanelli , Claudio Zanettini , Itzel Valencia , Luigi Marchionni

Combined extracts of Echinacea angustifolia DC. and Zingiber officinale Roscoe in softgel capsules: Pharmacokinetics and immunomodulatory effects assessed by gene expression profiling.

Phytomedicine : international journal of phytotherapy and phytopharmacology

Avec: Stefano Dall'Acqua , Iztok Grabnar , Roberto Verardo , Enio Klaric , Luigi Marchionni , Eddie Luidy-Imada , Stefania Sut , Chiara Agostinis , Roberta Bulla , Beatrice Perissutti , Dario Voinovich

Réseau de co-auteurs

Claudio Zanettini 6 collaborations

Eddie Luidy Imada 5 collaborations

Mohamed Omar 5 collaborations

Wikum Dinalankara 4 collaborations

David Sidransky 3 collaborations

Antje Arnold 2 collaborations

M Lisa Zhang 2 collaborations

Deepak P Edward 2 collaborations

Fausto J Rodriguez 2 collaborations

Rafael Guerrero-Preston 2 collaborations

Adriana Baez 2 collaborations

Giuseppe Nicolò Fanelli 2 collaborations

Pier Vitale Nuzzo 2 collaborations

Itzel Valencia 2 collaborations

Phuoc T Tran 2 collaborations

Daniel Y Song 2 collaborations

Donald Geman 2 collaborations

Yufeng Cao 2 collaborations

Philip Sutera 2 collaborations

Ana Kiess 2 collaborations

Ozan Cem Guler 2 collaborations

Amit Sawant 2 collaborations

Cem Onal 2 collaborations

Lei Ren 2 collaborations

Antonio Pea 1 collaboration

Jun Yu 1 collaboration

Michael Noe 1 collaboration

Claudio Luchini 1 collaboration

Alessandra Pulvirenti 1 collaboration

Roeland F de Wilde 1 collaboration

Lodewijk A Brosens 1 collaboration

Neda Rezaee 1 collaboration

Ammar Javed 1 collaboration

Peter Chianchiano 1 collaboration

Stefano Gobbo 1 collaboration

Paolo Regi 1 collaboration

Roberto Salvia 1 collaboration

Claudio Bassi 1 collaboration

Jin He 1 collaboration

Matthew J Weiss 1 collaboration

John L Cameron 1 collaboration

G Johan A Offerhaus 1 collaboration

Ralph H Hruban 1 collaboration

Rita T Lawlor 1 collaboration

Aldo Scarpa 1 collaboration

Christopher M Heaphy 1 collaboration

Laura D Wood 1 collaboration

Christopher L Wolfgang 1 collaboration

Nora M Haney 1 collaboration

Farzana A Faisal 1 collaboration

Jiayun Lu 1 collaboration

Liana B Guedes 1 collaboration

Victor E Reuter 1 collaboration

Howard I Scher 1 collaboration

James A Eastham 1 collaboration

Corinne Joshu 1 collaboration

Anuradha Gopalan 1 collaboration

Tamara L Lotan 1 collaboration

Fahcina Lawson 1 collaboration

Sebastian Rodriguez-Torres 1 collaboration

Maartje G Noordhuis 1 collaboration

Francesca Pirini 1 collaboration

Laura Manuel 1 collaboration

Blanca L Valle 1 collaboration

Tal Hadar 1 collaboration

Bianca Rivera 1 collaboration

Oluwasina Folawiyo 1 collaboration

Wayne M Koch 1 collaboration

William H Westra 1 collaboration

Young J Kim 1 collaboration

James R Eshleman 1 collaboration

Georg Häcker 1 collaboration

Mohamed Tarek Badr 1 collaboration

Yasmin Ghantous 1 collaboration

Esther Channah Broner 1 collaboration

Nishant Agrawal 1 collaboration

Alexander T Pearson 1 collaboration

Ari J Rosenberg 1 collaboration

Vasudha Mishra 1 collaboration

Alka Singh 1 collaboration

Imad Abu El-Naaj 1 collaboration

Peter A Savage 1 collaboration

Evgeny Izumchenko 1 collaboration

Hubert Pakula 1 collaboration

Ryan Carelli 1 collaboration

Filippo Pederzoli 1 collaboration

Tania Pannellini 1 collaboration

Fabio Socciarelli 1 collaboration

Lucie Van Emmenis 1 collaboration

Silvia Rodrigues 1 collaboration

Caroline Fidalgo-Ribeiro 1 collaboration

Nicholas J Brady 1 collaboration

Madhavi Jere 1 collaboration

Christopher Saladino 1 collaboration

Jason Stone 1 collaboration

Caitlin Unkenholz 1 collaboration

Richard Garner 1 collaboration

Mohammad K Alexanderani 1 collaboration

Francesca Khani 1 collaboration

Francisca Nunes de Almeida 1 collaboration

Cory Abate-Shen 1 collaboration

Matthew B Greenblatt 1 collaboration

David S Rickman 1 collaboration

Christopher E Barbieri 1 collaboration

Brian D Robinson 1 collaboration

Massimo Loda 1 collaboration

Noah M Hahn 1 collaboration

Michael A O'Donnell 1 collaboration

Jason A Efstathiou 1 collaboration

Marianna Zahurak 1 collaboration

Gary L Rosner 1 collaboration

Jeff Smith 1 collaboration

Max R Kates 1 collaboration

Trinity J Bivalacqua 1 collaboration

Alex S Baras 1 collaboration

Andres Matoso 1 collaboration

Woonyoung Choi 1 collaboration

Kellie N Smith 1 collaboration

Drew M Pardoll 1 collaboration

Bridget McGuire 1 collaboration

Mary Grace Phelan 1 collaboration

Burles A Johnson 1 collaboration

Tanya O'Neal 1 collaboration

David J McConkey 1 collaboration

Tracy L Rose 1 collaboration

Marc Bjurlin 1 collaboration

Emerson A Lim 1 collaboration

Charles G Drake 1 collaboration

James M McKiernan 1 collaboration

Israel Deutsch 1 collaboration

Christopher B Anderson 1 collaboration

Donald L Lamm 1 collaboration

Daniel M Geynisman 1 collaboration

Elizabeth R Plimack 1 collaboration

Mark A Hallman 1 collaboration

Eric M Horwitz 1 collaboration

Essel Al-Saleem 1 collaboration

David Y T Chen 1 collaboration

Richard E Greenberg 1 collaboration

Alexander Kutikov 1 collaboration

Gordon Guo 1 collaboration

Timothy A Masterson 1 collaboration

Nabil Adra 1 collaboration

Hristos Z Kaimakliotis 1 collaboration

Lotte Mulder 1 collaboration

Tendai Coady 1 collaboration

Laurent Younes 1 collaboration

William Silva Mendes 1 collaboration

Bardia Yousefi 1 collaboration

Tom Hrinivich 1 collaboration

Matthew Deek 1 collaboration

Ryan Phillips 1 collaboration

Danny Song 1 collaboration

Nese Torun 1 collaboration

Mehmet Reyhan 1 collaboration

Nicole L Simone 1 collaboration

Phuoc Tran 1 collaboration

Qian Ke 1 collaboration

Bonnie W Lau 1 collaboration

Kyounghee Huh 1 collaboration

Rafael Madero-Marroquin 1 collaboration

Federico De Marchi 1 collaboration

Yiting Lim 1 collaboration

Qiuju Wang 1 collaboration

Francisco Lobo 1 collaboration

Douglas B Smith 1 collaboration

Amy DeZern 1 collaboration

Mark J Levis 1 collaboration

Peter D Aplan 1 collaboration

William Matsui 1 collaboration

Lukasz P Gondek 1 collaboration

Catherine H Marshall 1 collaboration

Eddie L Imada 1 collaboration

Zhuojun Tang 1 collaboration

Emmanuel S Antonarakis 1 collaboration

J S Nix 1 collaboration

M Yuan 1 collaboration

E L Imada 1 collaboration

H Ames 1 collaboration

L Marchionni 1 collaboration

D H Gutmann 1 collaboration

F J Rodriguez 1 collaboration

Diego Fernando Sanchez 1 collaboration

Leonardo Collado-Torres 1 collaboration

Christopher Wilks 1 collaboration

Tejasvi Matam 1 collaboration

Aleksey Stupnikov 1 collaboration

Francisco Lobo-Pereira 1 collaboration

Chi-Wai Yip 1 collaboration

Kayoko Yasuzawa 1 collaboration

Naoto Kondo 1 collaboration

Masayoshi Itoh 1 collaboration

Harukazu Suzuki 1 collaboration

Takeya Kasukawa 1 collaboration

Chung-Chau Hon 1 collaboration

Michiel J L de Hoon 1 collaboration

Jay W Shin 1 collaboration

Piero Carninci 1 collaboration

Andrew E Jaffe 1 collaboration

Jeffrey T Leek 1 collaboration

Alexander Favorov 1 collaboration

Gloria R Franco 1 collaboration

Ben Langmead 1 collaboration

Vanessa Rivera-Amill 1 collaboration

Karem Caraballo 1 collaboration

Sebastian Rodríguez-Torres 1 collaboration

Ana Purcell-Wiltz 1 collaboration

Andrea A García 1 collaboration

Raphael S Torres 1 collaboration

Fernando T Zamuner 1 collaboration

Matthew J MacKay 1 collaboration

Rachel Baits 1 collaboration

Daisy Salgado 1 collaboration

Gaurav Khullar 1 collaboration

Jessica Metti 1 collaboration

Timothy Baker 1 collaboration

Joel Dudley 1 collaboration

Keilyn Vale 1 collaboration

Gabriela Pérez 1 collaboration

Lorena De Jesús 1 collaboration

Yaima Miranda 1 collaboration

Denise Ortiz 1 collaboration

Amanda García-Negrón 1 collaboration

Liliana Viera 1 collaboration

Alberto Ortiz 1 collaboration

Jorge A Canabal 1 collaboration

Josefina Romaguera 1 collaboration

Ivonne Jiménez-Velázquez 1 collaboration

José F Rodríguez-Orengo 1 collaboration

Christopher E Mason 1 collaboration

Yang Song 1 collaboration

Amol C Shetty 1 collaboration

Keara English 1 collaboration

Kim Van der Eecken 1 collaboration

Jarey Wang 1 collaboration

Soha Bazyar 1 collaboration

Sofie Verbeke 1 collaboration

Jo Van Dorpe 1 collaboration

Valérie Fonteyne 1 collaboration

Bram De Laere 1 collaboration

Mark Mishra 1 collaboration

Zaker Rana 1 collaboration

Jason Molitoris 1 collaboration

Matthew Ferris 1 collaboration

Theodore DeWeese 1 collaboration

Kenneth J Pienta 1 collaboration

Christopher Barbieri 1 collaboration

Nicole Simone 1 collaboration

Alejandro Berlin 1 collaboration

Piet Ost 1 collaboration

Matthew P Deek 1 collaboration

Ja-Young Jang 1 collaboration

Inah Hwang 1 collaboration

Heng Pan 1 collaboration

Jun Yao 1 collaboration

Lapo Alinari 1 collaboration

Eddie Imada 1 collaboration

Michael J Kluk 1 collaboration

Yizhe Wang 1 collaboration

Yunkyoung Lee 1 collaboration

Hua V Lin 1 collaboration

Xiangao Huang 1 collaboration

Maurizio Di Liberto 1 collaboration

Zhengming Chen 1 collaboration

Karla V Ballman 1 collaboration

Lewis C Cantley 1 collaboration

Giorgio Inghirami 1 collaboration

Olivier Elemento 1 collaboration

Robert A Baiocchi 1 collaboration

Selina Chen-Kiang 1 collaboration

Sandro Belvedere 1 collaboration

Hongwu Zheng 1 collaboration

Jihye Paik 1 collaboration

Francisco Pereira Lobo 1 collaboration

Rumen Kostadinov 1 collaboration

Anna Serra 1 collaboration

Federico Genzano Besso 1 collaboration

Silvia Deaglio 1 collaboration

Piero Stratta 1 collaboration

Monica Berrino 1 collaboration

Mohamed N Omar 1 collaboration

Gianluca Gaidano 1 collaboration

Benedetto Bruno 1 collaboration

Giuseppe Saglio 1 collaboration

Antonio Amoroso 1 collaboration

Elizabeth M Zawidzka 1 collaboration

Luca Biavati 1 collaboration

Amy Thomas 1 collaboration

Robert Leone 1 collaboration

Ivan Borrello 1 collaboration

Zhuoran Xu 1 collaboration

Shuang Wang 1 collaboration

Francesco Ravera 1 collaboration

Sara Bleve 1 collaboration

Stefano Dall'Acqua 1 collaboration

Iztok Grabnar 1 collaboration

Roberto Verardo 1 collaboration

Enio Klaric 1 collaboration

Eddie Luidy-Imada 1 collaboration

Stefania Sut 1 collaboration

Chiara Agostinis 1 collaboration

Roberta Bulla 1 collaboration

Beatrice Perissutti 1 collaboration

Dario Voinovich 1 collaboration