Karen Lolans

Affiliations

Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA.

Publications (18)

Threshold-free genomic cluster detection to track transmission pathways in health-care settings: a genomic epidemiology analysis.

The Lancet. Microbe

Avec: Shawn E Hawken , Rachel D Yelin , Karen Lolans , Ali Pirani , Robert A Weinstein , Michael Y Lin , Mary K Hayden , Evan S Snitkin , Auteur inconnu

Relationship between chlorhexidine gluconate concentration and microbial colonization of patients' skin.

Infection control and hospital epidemiology

Avec: Yoona Rhee , Andrew T Simms , Michael Schoeny , Arthur W Baker , Meghan A Baker , Shruti Gohil , Chanu Rhee , Naasha J Talati , David K Warren , Sharon Welbel , Karen Lolans , Pamela B Bell , Christine Fukuda , Mary K Hayden , Michael Y Lin , Auteur inconnu

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome.

Genome biology

Avec: Alon Shaiber , Amy D Willis , Tom O Delmont , Simon Roux , Lin-Xing Chen , Abigail C Schmid , Mahmoud Yousef , Andrea R Watson , Karen Lolans , Özcan C Esen , Sonny T M Lee , Nora Downey , Hilary G Morrison , Floyd E Dewhirst , Jessica L Mark Welch , A Murat Eren

Nasal Iodophor Antiseptic vs Nasal Mupirocin Antibiotic in the Setting of Chlorhexidine Bathing to Prevent Infections in Adult ICUs: A Randomized Clinical Trial.

JAMA

Avec: Susan S Huang , Edward J Septimus , Ken Kleinman , Lauren T Heim , Julia A Moody , Taliser R Avery , Laura McLean , Syma Rashid , Katherine Haffenreffer , Lauren Shimelman , Whitney Staub-Juergens , Caren Spencer-Smith , Selsebil Sljivo , Ed Rosen , Russell E Poland , Micaela H Coady , Chi Hyun Lee , Eunice J Blanchard , Kimberly Reddish , Mary K Hayden , Robert A Weinstein , Brandon Carver , Kimberly Smith , Jason Hickok , Karen Lolans , Nadia Khan , S Gwynn Sturdevant , Sujan C Reddy , John A Jernigan , Kenneth E Sands , Jonathan B Perlin , Richard Platt

A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut.

bioRxiv : the preprint server for biology

Avec: Emily C Fogarty , Matthew S Schechter , Karen Lolans , Madeline L Sheahan , Iva Veseli , Ryan Moore , Evan Kiefl , Thomas Moody , Phoebe A Rice , Michael K Yu , Mark Mimee , Eugene B Chang , Sandra L Mclellan , Amy D Willis , Laurie E Comstock , A Murat Eren

Impact of doffing errors on healthcare worker self-contamination when caring for patients on contact precautions.

Infection control and hospital epidemiology

Avec: Koh Okamoto , Yoona Rhee , Michael Schoeny , Karen Lolans , Jennifer Cheng , Shivani Reddy , Robert A Weinstein , Mary K Hayden , Kyle J Popovich , Auteur inconnu

The Wolbachia mobilome in Culex pipiens includes a putative plasmid.

Nature communications

Avec: Julie Reveillaud , Sarah R Bordenstein , Corinne Cruaud , Alon Shaiber , Özcan C Esen , Mylène Weill , Patrick Makoundou , Karen Lolans , Andrea R Watson , Ignace Rakotoarivony , Seth R Bordenstein , A Murat Eren

High molecular weight DNA extraction strategies for long-read sequencing of complex metagenomes.

Molecular ecology resources

Avec: Florian Trigodet , Karen Lolans , Emily Fogarty , Alon Shaiber , Hilary G Morrison , Luis Barreiro , Bana Jabri , A Murat Eren

Cohorting KPC+

Infection control and hospital epidemiology

Avec: Shawn E Hawken , Mary K Hayden , Karen Lolans , Rachel D Yelin , Robert A Weinstein , Michael Y Lin , Evan S Snitkin

Increased Relative Abundance of Klebsiella pneumoniae Carbapenemase-producing Klebsiella pneumoniae Within the Gut Microbiota Is Associated With Risk of Bloodstream Infection in Long-term Acute Care Hospital Patients.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Teppei Shimasaki , Anna Seekatz , Christine Bassis , Yoona Rhee , Rachel D Yelin , Louis Fogg , Thelma Dangana , Enrique Cornejo Cisneros , Robert A Weinstein , Koh Okamoto , Karen Lolans , Michael Schoeny , Michael Y Lin , Nicholas M Moore , Vincent B Young , Mary K Hayden , Auteur inconnu

tRNA abundance, modification and fragmentation in nasopharyngeal swabs as biomarkers for COVID-19 severity.

Frontiers in cell and developmental biology

Avec: Christopher D Katanski , Hala Alshammary , Christopher P Watkins , Sihao Huang , Ana Gonzales-Reiche , Emilia Mia Sordillo , Harm van Bakel , Auteur inconnu , Karen Lolans , Viviana Simon , Tao Pan

Metabolic independence drives gut microbial colonization and resilience in health and disease.

Genome biology

Avec: Andrea R Watson , Jessika Füssel , Iva Veseli , Johanna Zaal DeLongchamp , Marisela Silva , Florian Trigodet , Karen Lolans , Alon Shaiber , Emily Fogarty , Joseph M Runde , Christopher Quince , Michael K Yu , Arda Söylev , Hilary G Morrison , Sonny T M Lee , Dina Kao , David T Rubin , Bana Jabri , Thomas Louie , A Murat Eren

Dynamic genetic adaptation of Bacteroides thetaiotaomicron during murine gut colonization.

Cell reports

Avec: Megan S Kennedy , Manjing Zhang , Orlando DeLeon , Jacie Bissell , Florian Trigodet , Karen Lolans , Sara Temelkova , Katherine T Carroll , Aretha Fiebig , Adam Deutschbauer , Ashley M Sidebottom , Joash Lake , Chris Henry , Phoebe A Rice , Joy Bergelson , Eugene B Chang

Author Correction: The Wolbachia mobilome in Culex pipiens includes a putative plasmid.

Nature communications

Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling.

Genome biology

Avec: Sihao Huang , Wen Zhang , Christopher D Katanski , Devin Dersh , Qing Dai , Karen Lolans , Jonathan Yewdell , A Murat Eren , Tao Pan

Impact of measurement and feedback on chlorhexidine gluconate bathing among intensive care unit patients: A multicenter study.

Infection control and hospital epidemiology

Avec: Yoona Rhee , Mary K Hayden , Michael Schoeny , Arthur W Baker , Meghan A Baker , Shruti Gohil , Chanu Rhee , Naasha J Talati , David K Warren , Sharon Welbel , Karen Lolans , Bardia Bahadori , Pamela B Bell , Heilen Bravo , Thelma Dangana , Christine Fukuda , Tracey Habrock Bach , Alicia Nelson , Andrew T Simms , Pam Tolomeo , Robert Wolf , Rachel Yelin , Michael Y Lin , Auteur inconnu

Comparison of Daily versus Admission and Discharge Surveillance Cultures for Multidrug-Resistant Organism Detection in an Intensive Care Unit.

The Journal of infectious diseases

Avec: Sarah E Sansom , Teppei Shimasaki , Thelma Dangana , Michael Y Lin , Michael E Schoeny , Christine Fukuda , Nicholas M Moore , Rachel D Yelin , Christine M Bassis , Yoona Rhee , Enrique Cornejo Cisneros , Pamela Bell , Karen Lolans , Khaled Aboushaala , Vincent B Young , Mary K Hayden

A cryptic plasmid is among the most numerous genetic elements in the human gut.

Cell

Avec: Emily C Fogarty , Matthew S Schechter , Karen Lolans , Madeline L Sheahan , Iva Veseli , Ryan M Moore , Evan Kiefl , Thomas Moody , Phoebe A Rice , Michael K Yu , Mark Mimee , Eugene B Chang , Hans-Joachim Ruscheweyh , Shinichi Sunagawa , Sandra L Mclellan , Amy D Willis , Laurie E Comstock , A Murat Eren

Réseau de co-auteurs

Mary K Hayden 8 collaborations

A Murat Eren 8 collaborations

Michael Y Lin 6 collaborations

None None 6 collaborations

Robert A Weinstein 5 collaborations

Yoona Rhee 5 collaborations

Alon Shaiber 5 collaborations

Rachel D Yelin 4 collaborations

Michael Schoeny 4 collaborations

Andrea R Watson 4 collaborations

Christine Fukuda 3 collaborations

Amy D Willis 3 collaborations

Özcan C Esen 3 collaborations

Hilary G Morrison 3 collaborations

Iva Veseli 3 collaborations

Phoebe A Rice 3 collaborations

Michael K Yu 3 collaborations

Eugene B Chang 3 collaborations

Florian Trigodet 3 collaborations

Thelma Dangana 3 collaborations

Shawn E Hawken 2 collaborations

Evan S Snitkin 2 collaborations

Andrew T Simms 2 collaborations

Arthur W Baker 2 collaborations

Meghan A Baker 2 collaborations

Shruti Gohil 2 collaborations

Chanu Rhee 2 collaborations

Naasha J Talati 2 collaborations

David K Warren 2 collaborations

Sharon Welbel 2 collaborations

Pamela B Bell 2 collaborations

Sonny T M Lee 2 collaborations

Emily C Fogarty 2 collaborations

Matthew S Schechter 2 collaborations

Madeline L Sheahan 2 collaborations

Evan Kiefl 2 collaborations

Thomas Moody 2 collaborations

Mark Mimee 2 collaborations

Sandra L Mclellan 2 collaborations

Laurie E Comstock 2 collaborations

Koh Okamoto 2 collaborations

Julie Reveillaud 2 collaborations

Sarah R Bordenstein 2 collaborations

Corinne Cruaud 2 collaborations

Mylène Weill 2 collaborations

Patrick Makoundou 2 collaborations

Ignace Rakotoarivony 2 collaborations

Seth R Bordenstein 2 collaborations

Emily Fogarty 2 collaborations

Bana Jabri 2 collaborations

Teppei Shimasaki 2 collaborations

Enrique Cornejo Cisneros 2 collaborations

Nicholas M Moore 2 collaborations

Vincent B Young 2 collaborations

Christopher D Katanski 2 collaborations

Sihao Huang 2 collaborations

Tao Pan 2 collaborations

Ali Pirani 1 collaboration

Tom O Delmont 1 collaboration

Simon Roux 1 collaboration

Lin-Xing Chen 1 collaboration

Abigail C Schmid 1 collaboration

Mahmoud Yousef 1 collaboration

Nora Downey 1 collaboration

Floyd E Dewhirst 1 collaboration

Jessica L Mark Welch 1 collaboration

Susan S Huang 1 collaboration

Edward J Septimus 1 collaboration

Ken Kleinman 1 collaboration

Lauren T Heim 1 collaboration

Julia A Moody 1 collaboration

Taliser R Avery 1 collaboration

Laura McLean 1 collaboration

Syma Rashid 1 collaboration

Katherine Haffenreffer 1 collaboration

Lauren Shimelman 1 collaboration

Whitney Staub-Juergens 1 collaboration

Caren Spencer-Smith 1 collaboration

Selsebil Sljivo 1 collaboration

Ed Rosen 1 collaboration

Russell E Poland 1 collaboration

Micaela H Coady 1 collaboration

Chi Hyun Lee 1 collaboration

Eunice J Blanchard 1 collaboration

Kimberly Reddish 1 collaboration

Brandon Carver 1 collaboration

Kimberly Smith 1 collaboration

Jason Hickok 1 collaboration

Nadia Khan 1 collaboration

S Gwynn Sturdevant 1 collaboration

Sujan C Reddy 1 collaboration

John A Jernigan 1 collaboration

Kenneth E Sands 1 collaboration

Jonathan B Perlin 1 collaboration

Richard Platt 1 collaboration

Ryan Moore 1 collaboration

Jennifer Cheng 1 collaboration

Shivani Reddy 1 collaboration

Kyle J Popovich 1 collaboration

Luis Barreiro 1 collaboration

Anna Seekatz 1 collaboration

Christine Bassis 1 collaboration

Louis Fogg 1 collaboration

Hala Alshammary 1 collaboration

Christopher P Watkins 1 collaboration

Ana Gonzales-Reiche 1 collaboration

Emilia Mia Sordillo 1 collaboration

Harm van Bakel 1 collaboration

Viviana Simon 1 collaboration

Jessika Füssel 1 collaboration

Johanna Zaal DeLongchamp 1 collaboration

Marisela Silva 1 collaboration

Joseph M Runde 1 collaboration

Christopher Quince 1 collaboration

Arda Söylev 1 collaboration

Dina Kao 1 collaboration

David T Rubin 1 collaboration

Thomas Louie 1 collaboration

Megan S Kennedy 1 collaboration

Manjing Zhang 1 collaboration

Orlando DeLeon 1 collaboration

Jacie Bissell 1 collaboration

Sara Temelkova 1 collaboration

Katherine T Carroll 1 collaboration

Aretha Fiebig 1 collaboration

Adam Deutschbauer 1 collaboration

Ashley M Sidebottom 1 collaboration

Joash Lake 1 collaboration

Chris Henry 1 collaboration

Joy Bergelson 1 collaboration

Wen Zhang 1 collaboration

Devin Dersh 1 collaboration

Qing Dai 1 collaboration

Jonathan Yewdell 1 collaboration

Bardia Bahadori 1 collaboration

Heilen Bravo 1 collaboration

Tracey Habrock Bach 1 collaboration

Alicia Nelson 1 collaboration

Pam Tolomeo 1 collaboration

Robert Wolf 1 collaboration

Rachel Yelin 1 collaboration

Sarah E Sansom 1 collaboration

Michael E Schoeny 1 collaboration

Christine M Bassis 1 collaboration

Pamela Bell 1 collaboration

Khaled Aboushaala 1 collaboration

Ryan M Moore 1 collaboration

Hans-Joachim Ruscheweyh 1 collaboration

Shinichi Sunagawa 1 collaboration