Jonathan Rodiger

Affiliations

Department of Genetics, Blavatnik Institute, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA, 02115, USA.

ORCID: 0000-0002-1540-5030

Publications (12)

Next-generation large-scale binary protein interaction network for Drosophila melanogaster.

Nature communications

Avec: Hong-Wen Tang , Kerstin Spirohn , Yanhui Hu , Tong Hao , István A Kovács , Yue Gao , Richard Binari , Donghui Yang-Zhou , Kenneth H Wan , Joel S Bader , Dawit Balcha , Wenting Bian , Benjamin W Booth , Atina G Coté , Steffi de Rouck , Alice Desbuleux , Kah Yong Goh , Dae-Kyum Kim , Jennifer J Knapp , Wen Xing Lee , Irma Lemmens , Cathleen Li , Mian Li , Roujia Li , Hyobin Julianne Lim , Yifang Liu , Katja Luck , Dylan Markey , Carl Pollis , Sudharshan Rangarajan , Jonathan Rodiger , Sadie Schlabach , Yun Shen , Dayag Sheykhkarimli , Bridget TeeKing , Frederick P Roth , Jan Tavernier , Michael A Calderwood , David E Hill , Susan E Celniker , Marc Vidal , Norbert Perrimon , Stephanie E Mohr

Bioinformatic and cell-based tools for pooled CRISPR knockout screening in mosquitos.

Nature communications

Avec: Raghuvir Viswanatha , Enzo Mameli , Jonathan Rodiger , Pierre Merckaert , Fabiana Feitosa-Suntheimer , Tonya M Colpitts , Stephanie E Mohr , Yanhui Hu , Norbert Perrimon

FlyRNAi.org-the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update.

Nucleic acids research

Avec: Yanhui Hu , Aram Comjean , Jonathan Rodiger , Yifang Liu , Yue Gao , Verena Chung , Jonathan Zirin , Norbert Perrimon , Stephanie E Mohr

Paralog Explorer: A resource for mining information about paralogs in common research organisms.

Computational and structural biotechnology journal

Avec: Yanhui Hu , Ben Ewen-Campen , Aram Comjean , Jonathan Rodiger , Stephanie E Mohr , Norbert Perrimon

BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms.

G3 (Bethesda, Md.)

Avec: Yanhui Hu , Verena Chung , Aram Comjean , Jonathan Rodiger , Fnu Nipun , Norbert Perrimon , Stephanie E Mohr

FlyPhoneDB: an integrated web-based resource for cell-cell communication prediction in Drosophila.

Genetics

Avec: Yifang Liu , Joshua Shing Shun Li , Jonathan Rodiger , Aram Comjean , Helen Attrill , Giulia Antonazzo , Nicholas H Brown , Yanhui Hu , Norbert Perrimon

REPTOR and CREBRF encode key regulators of muscle energy metabolism.

Nature communications

Avec: Pedro Saavedra , Phillip A Dumesic , Yanhui Hu , Elizabeth Filine , Patrick Jouandin , Richard Binari , Sarah E Wilensky , Jonathan Rodiger , Haiyun Wang , Weihang Chen , Ying Liu , Bruce M Spiegelman , Norbert Perrimon

Use of the CRISPR-Cas9 System in Drosophila Cultured Cells to Introduce Fluorescent Tags into Endogenous Genes.

Current protocols in molecular biology

Avec: Justin A Bosch , Shannon Knight , Oguz Kanca , Jonathan Zirin , Donghui Yang-Zhou , Yanhui Hu , Jonathan Rodiger , Gabriel Amador , Hugo J Bellen , Norbert Perrimon , Stephanie E Mohr

Pooled CRISPR Screens in Drosophila Cells.

Current protocols in molecular biology

Avec: Raghuvir Viswanatha , Roderick Brathwaite , Yanhui Hu , Zhongchi Li , Jonathan Rodiger , Pierre Merckaert , Verena Chung , Stephanie E Mohr , Norbert Perrimon

SNP-CRISPR: A Web Tool for SNP-Specific Genome Editing.

G3 (Bethesda, Md.)

Avec: Chiao-Lin Chen , Jonathan Rodiger , Verena Chung , Raghuvir Viswanatha , Stephanie E Mohr , Yanhui Hu , Norbert Perrimon

DRscDB: A single-cell RNA-seq resource for data mining and data comparison across species.

Computational and structural biotechnology journal

Avec: Yanhui Hu , Sudhir Gopal Tattikota , Yifang Liu , Aram Comjean , Yue Gao , Corey Forman , Grace Kim , Jonathan Rodiger , Irene Papatheodorou , Gilberto Dos Santos , Stephanie E Mohr , Norbert Perrimon

FlyRNAi.org 2025 update-expanded resources for new technologies and species.

Nucleic acids research

Avec: Yanhui Hu , Aram Comjean , Jonathan Rodiger , Weihang Chen , Ah-Ram Kim , Mujeeb Qadiri , Chenxi Gao , Jonathan Zirin , Stephanie E Mohr , Norbert Perrimon

Réseau de co-auteurs

Yanhui Hu 12 collaborations

Norbert Perrimon 12 collaborations

Stephanie E Mohr 10 collaborations

Aram Comjean 6 collaborations

Yifang Liu 4 collaborations

Verena Chung 4 collaborations

Yue Gao 3 collaborations

Raghuvir Viswanatha 3 collaborations

Jonathan Zirin 3 collaborations

Richard Binari 2 collaborations

Donghui Yang-Zhou 2 collaborations

Pierre Merckaert 2 collaborations

Weihang Chen 2 collaborations

Hong-Wen Tang 1 collaboration

Kerstin Spirohn 1 collaboration

Tong Hao 1 collaboration

István A Kovács 1 collaboration

Kenneth H Wan 1 collaboration

Joel S Bader 1 collaboration

Dawit Balcha 1 collaboration

Wenting Bian 1 collaboration

Benjamin W Booth 1 collaboration

Atina G Coté 1 collaboration

Steffi de Rouck 1 collaboration

Alice Desbuleux 1 collaboration

Kah Yong Goh 1 collaboration

Dae-Kyum Kim 1 collaboration

Jennifer J Knapp 1 collaboration

Wen Xing Lee 1 collaboration

Irma Lemmens 1 collaboration

Cathleen Li 1 collaboration

Mian Li 1 collaboration

Roujia Li 1 collaboration

Hyobin Julianne Lim 1 collaboration

Katja Luck 1 collaboration

Dylan Markey 1 collaboration

Carl Pollis 1 collaboration

Sudharshan Rangarajan 1 collaboration

Sadie Schlabach 1 collaboration

Yun Shen 1 collaboration

Dayag Sheykhkarimli 1 collaboration

Bridget TeeKing 1 collaboration

Frederick P Roth 1 collaboration

Jan Tavernier 1 collaboration

Michael A Calderwood 1 collaboration

David E Hill 1 collaboration

Susan E Celniker 1 collaboration

Marc Vidal 1 collaboration

Enzo Mameli 1 collaboration

Fabiana Feitosa-Suntheimer 1 collaboration

Tonya M Colpitts 1 collaboration

Ben Ewen-Campen 1 collaboration

Fnu Nipun 1 collaboration

Joshua Shing Shun Li 1 collaboration

Helen Attrill 1 collaboration

Giulia Antonazzo 1 collaboration

Nicholas H Brown 1 collaboration

Pedro Saavedra 1 collaboration

Phillip A Dumesic 1 collaboration

Elizabeth Filine 1 collaboration

Patrick Jouandin 1 collaboration

Sarah E Wilensky 1 collaboration

Haiyun Wang 1 collaboration

Ying Liu 1 collaboration

Bruce M Spiegelman 1 collaboration

Justin A Bosch 1 collaboration

Shannon Knight 1 collaboration

Oguz Kanca 1 collaboration

Gabriel Amador 1 collaboration

Hugo J Bellen 1 collaboration

Roderick Brathwaite 1 collaboration

Zhongchi Li 1 collaboration

Chiao-Lin Chen 1 collaboration

Sudhir Gopal Tattikota 1 collaboration

Corey Forman 1 collaboration

Grace Kim 1 collaboration

Irene Papatheodorou 1 collaboration

Gilberto Dos Santos 1 collaboration

Ah-Ram Kim 1 collaboration

Mujeeb Qadiri 1 collaboration

Chenxi Gao 1 collaboration