Daniel Franco-Barranco

Affiliations
  • Donostia International Physics Center (DIPC), Donostia-San Sebastián, Spain. daniel_franco001@ehu.eus.
  • Department of Computer Science and Artificial Intelligence, University of the Basque Country (UPV/EHU), Donostia-San Sebastian, Spain. daniel_franco001@ehu.eus.
ORCID: http://orcid.org/0000-0002-1109-110X

Publications (7)

Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes.

Neuroinformatics
Avec: Daniel Franco-Barranco , Arrate Muñoz-Barrutia , Ignacio Arganda-Carreras

MitoEM Dataset: Large-scale 3D Mitochondria Instance Segmentation from EM Images.

Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention
Avec: Donglai Wei , Zudi Lin , Daniel Franco-Barranco , Nils Wendt , Xingyu Liu , Wenjie Yin , Xin Huang , Aarush Gupta , Won-Dong Jang , Xueying Wang , Ignacio Arganda-Carreras , Jeff W Lichtman , Hanspeter Pfister

A quantitative biophysical principle to explain the 3D cellular connectivity in curved epithelia.

Cell systems
Avec: Pedro Gómez-Gálvez , Pablo Vicente-Munuera , Samira Anbari , Antonio Tagua , Carmen Gordillo-Vázquez , Jesús A Andrés-San Román , Daniel Franco-Barranco , Ana M Palacios , Antonio Velasco , Carlos Capitán-Agudo , Clara Grima , Valentina Annese , Ignacio Arganda-Carreras , Rafael Robles , Alberto Márquez , Javier Buceta , Luis M Escudero

Deep learning based domain adaptation for mitochondria segmentation on EM volumes.

Computer methods and programs in biomedicine
Avec: Daniel Franco-Barranco , Julio Pastor-Tronch , Aitor González-Marfil , Arrate Muñoz-Barrutia , Ignacio Arganda-Carreras

CartoCell, a high-content pipeline for 3D image analysis, unveils cell morphology patterns in epithelia.

Cell reports methods
Avec: Jesús A Andrés-San Román , Carmen Gordillo-Vázquez , Daniel Franco-Barranco , Laura Morato , Cecilia H Fernández-Espartero , Gabriel Baonza , Antonio Tagua , Pablo Vicente-Munuera , Ana M Palacios , María P Gavilán , Fernando Martín-Belmonte , Valentina Annese , Pedro Gómez-Gálvez , Ignacio Arganda-Carreras , Luis M Escudero

Current Progress and Challenges in Large-Scale 3D Mitochondria Instance Segmentation.

IEEE transactions on medical imaging
Avec: Daniel Franco-Barranco , Zudi Lin , Won-Dong Jang , Xueying Wang , Qijia Shen , Wenjie Yin , Yutian Fan , Mingxing Li , Chang Chen , Zhiwei Xiong , Rui Xin , Hao Liu , Huai Chen , Zhili Li , Jie Zhao , Xuejin Chen , Constantin Pape , Ryan Conrad , Luke Nightingale , Joost de Folter , Martin L Jones , Yanling Liu , Dorsa Ziaei , Stephan Huschauer , Ignacio Arganda-Carreras , Hanspeter Pfister , Donglai Wei

A deep learning method that identifies cellular heterogeneity using nanoscale nuclear features.

Nature machine intelligence
Avec: Davide Carnevali , Limei Zhong , Esther González-Almela , Carlotta Viana , Mikhail Rotkevich , Aiping Wang , Daniel Franco-Barranco , Aitor Gonzalez-Marfil , Maria Victoria Neguembor , Alvaro Castells-Garcia , Ignacio Arganda-Carreras , Maria Pia Cosma

Réseau de co-auteurs

Ignacio Arganda-Carreras 7 collaborations
Arrate Muñoz-Barrutia 2 collaborations
Donglai Wei 2 collaborations
Zudi Lin 2 collaborations
Wenjie Yin 2 collaborations
Won-Dong Jang 2 collaborations
Xueying Wang 2 collaborations
Hanspeter Pfister 2 collaborations
Pedro Gómez-Gálvez 2 collaborations
Pablo Vicente-Munuera 2 collaborations
Antonio Tagua 2 collaborations
Carmen Gordillo-Vázquez 2 collaborations
Jesús A Andrés-San Román 2 collaborations
Ana M Palacios 2 collaborations
Valentina Annese 2 collaborations
Luis M Escudero 2 collaborations
Nils Wendt 1 collaboration
Xingyu Liu 1 collaboration
Xin Huang 1 collaboration
Aarush Gupta 1 collaboration
Jeff W Lichtman 1 collaboration
Samira Anbari 1 collaboration
Antonio Velasco 1 collaboration
Carlos Capitán-Agudo 1 collaboration
Clara Grima 1 collaboration
Rafael Robles 1 collaboration
Alberto Márquez 1 collaboration
Javier Buceta 1 collaboration
Julio Pastor-Tronch 1 collaboration
Aitor González-Marfil 1 collaboration
Laura Morato 1 collaboration
Cecilia H Fernández-Espartero 1 collaboration
Gabriel Baonza 1 collaboration
María P Gavilán 1 collaboration
Fernando Martín-Belmonte 1 collaboration
Qijia Shen 1 collaboration
Yutian Fan 1 collaboration
Mingxing Li 1 collaboration
Chang Chen 1 collaboration
Zhiwei Xiong 1 collaboration
Rui Xin 1 collaboration
Hao Liu 1 collaboration
Huai Chen 1 collaboration
Zhili Li 1 collaboration
Jie Zhao 1 collaboration
Xuejin Chen 1 collaboration
Constantin Pape 1 collaboration
Ryan Conrad 1 collaboration
Luke Nightingale 1 collaboration
Joost de Folter 1 collaboration
Martin L Jones 1 collaboration
Yanling Liu 1 collaboration
Dorsa Ziaei 1 collaboration
Stephan Huschauer 1 collaboration
Davide Carnevali 1 collaboration
Limei Zhong 1 collaboration
Esther González-Almela 1 collaboration
Carlotta Viana 1 collaboration
Mikhail Rotkevich 1 collaboration
Aiping Wang 1 collaboration
Aitor Gonzalez-Marfil 1 collaboration
Maria Victoria Neguembor 1 collaboration
Alvaro Castells-Garcia 1 collaboration
Maria Pia Cosma 1 collaboration