Annick Waldt

Affiliations

Chemical Biology and Therapeutics, Novartis Institutes for Biomedical Research, Basel, Switzerland.

ORCID: 0000-0002-4670-1588

Publications (11)

Systematic dissection of transcriptional regulatory networks by genome-scale and single-cell CRISPR screens.

Science advances

Avec: Rui Lopes , Kathleen Sprouffske , Caibin Sheng , Esther C H Uijttewaal , Adriana Emma Wesdorp , Jan Dahinden , Simon Wengert , Juan Diaz-Miyar , Umut Yildiz , Melusine Bleu , Verena Apfel , Fanny Mermet-Meillon , Rok Krese , Mathias Eder , André Vidas Olsen , Philipp Hoppe , Judith Knehr , Walter Carbone , Rachel Cuttat , Annick Waldt , Marc Altorfer , Ulrike Naumann , Joachim Weischenfeldt , Antoine deWeck , Audrey Kauffmann , Guglielmo Roma , Dirk Schübeler , Giorgio G Galli

Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution.

Cell

Avec: Cameron S Cowan , Magdalena Renner , Martina De Gennaro , Brigitte Gross-Scherf , David Goldblum , Yanyan Hou , Martin Munz , Tiago M Rodrigues , Jacek Krol , Tamas Szikra , Rachel Cuttat , Annick Waldt , Panagiotis Papasaikas , Roland Diggelmann , Claudia P Patino-Alvarez , Patricia Galliker , Stefan E Spirig , Dinko Pavlinic , Nadine Gerber-Hollbach , Sven Schuierer , Aldin Srdanovic , Marton Balogh , Riccardo Panero , Akos Kusnyerik , Arnold Szabo , Michael B Stadler , Selim Orgül , Simone Picelli , Pascal W Hasler , Andreas Hierlemann , Hendrik P N Scholl , Guglielmo Roma , Florian Nigsch , Botond Roska

Self-organization and symmetry breaking in intestinal organoid development.

Nature

Avec: Denise Serra , Urs Mayr , Andrea Boni , Ilya Lukonin , Markus Rempfler , Ludivine Challet Meylan , Michael B Stadler , Petr Strnad , Panagiotis Papasaikas , Dario Vischi , Annick Waldt , Guglielmo Roma , Prisca Liberali

Mass Cytometry of CSF Identifies an MS-Associated B-cell Population.

Neurology(R) neuroimmunology & neuroinflammation

Avec: David Johansson , Céline Rauld , Julien Roux , Camille Regairaz , Edoardo Galli , Ilaria Callegari , Layla Raad , Annick Waldt , Rachel Cuttat , Guglielmo Roma , Martin Diebold , Burkhard Becher , Jens Kuhle , Tobias Derfuss , José M Carballido , Nicholas S R Sanderson

ZNRF3 and RNF43 cooperate to safeguard metabolic liver zonation and hepatocyte proliferation.

Cell stem cell

Avec: Tianliang Sun , Stefano Annunziato , Sebastian Bergling , Caibin Sheng , Vanessa Orsini , Pascal Forcella , Monika Pikiolek , Venkatesh Kancherla , Sjoerd Holwerda , Dilek Imanci , Fabian Wu , Ludivine Challet Meylan , Lea F Puehringer , Annick Waldt , Mevion Oertli , Sven Schuierer , Luigi M Terracciano , Stefan Reinker , Heinz Ruffner , Tewis Bouwmeester , Andreas W Sailer , Elizabeth George , Guglielmo Roma , Antoine de Weck , Salvatore Piscuoglio , Felix Lohmann , Ulrike Naumann , Prisca Liberali , Feng Cong , Jan S Tchorz

YAP, but Not RSPO-LGR4/5, Signaling in Biliary Epithelial Cells Promotes a Ductular Reaction in Response to Liver Injury.

Cell stem cell

Avec: Lara Planas-Paz , Tianliang Sun , Monika Pikiolek , Nadire R Cochran , Sebastian Bergling , Vanessa Orsini , Zinger Yang , Frederic Sigoillot , Jasna Jetzer , Maryam Syed , Marilisa Neri , Sven Schuierer , Lapo Morelli , Philipp S Hoppe , Wibke Schwarzer , Carlos M Cobos , John L Alford , Le Zhang , Rachel Cuttat , Annick Waldt , Nicole Carballido-Perrig , Florian Nigsch , Bernd Kinzel , Thomas B Nicholson , Yi Yang , Xiaohong Mao , Luigi M Terracciano , Carsten Russ , John S Reece-Hoyes , Caroline Gubser Keller , Andreas W Sailer , Tewis Bouwmeester , Linda E Greenbaum , Jesse J Lugus , Feng Cong , Gregory McAllister , Gregory R Hoffman , Guglielmo Roma , Jan S Tchorz

Single-cell and bulk transcriptomics of the liver reveals potential targets of NASH with fibrosis.

Scientific reports

Avec: Zhong-Yi Wang , Adrian Keogh , Annick Waldt , Rachel Cuttat , Marilisa Neri , Shanshan Zhu , Sven Schuierer , Alexandra Ruchti , Christophe Crochemore , Judith Knehr , Julie Bastien , Iwona Ksiazek , Daniel Sánchez-Taltavull , Hui Ge , Jing Wu , Guglielmo Roma , Stephen B Helliwell , Deborah Stroka , Florian Nigsch

Immune cell landscaping reveals a protective role for regulatory T cells during kidney injury and fibrosis.

JCI insight

Avec: Fernanda do Valle Duraes , Armelle Lafont , Martin Beibel , Kea Martin , Katy Darribat , Rachel Cuttat , Annick Waldt , Ulrike Naumann , Grazyna Wieczorek , Swann Gaulis , Sabina Pfister , Kirsten D Mertz , Jianping Li , Guglielmo Roma , Max Warncke

CellSIUS provides sensitive and specific detection of rare cell populations from complex single-cell RNA-seq data.

Genome biology

Avec: Rebekka Wegmann , Marilisa Neri , Sven Schuierer , Bilada Bilican , Huyen Hartkopf , Florian Nigsch , Felipa Mapa , Annick Waldt , Rachel Cuttat , Max R Salick , Joe Raymond , Ajamete Kaykas , Guglielmo Roma , Caroline Gubser Keller

Genome-wide screening in human kidney organoids identifies developmental and disease-related aspects of nephrogenesis.

Cell stem cell

Avec: Rosemarie Ungricht , Laure Guibbal , Marie-Christine Lasbennes , Vanessa Orsini , Martin Beibel , Annick Waldt , Rachel Cuttat , Walter Carbone , Anne Basler , Guglielmo Roma , Florian Nigsch , Jan S Tchorz , Dominic Hoepfner , Philipp S Hoppe

Sustained Trem2 stabilization accelerates microglia heterogeneity and Aβ pathology in a mouse model of Alzheimer's disease.

Cell reports

Avec: Rahul Dhandapani , Marilisa Neri , Mario Bernhard , Irena Brzak , Tatjana Schweizer , Stefan Rudin , Stefanie Joller , Ramon Berth , Jasmin Kernen , Anna Neuhaus , Annick Waldt , Rachel Cuttat , Ulrike Naumann , Caroline Gubser Keller , Guglielmo Roma , Dominik Feuerbach , Derya R Shimshek , Ulf Neumann , Fabrizio Gasparini , Ivan Galimberti

Réseau de co-auteurs

Guglielmo Roma 11 collaborations

Rachel Cuttat 9 collaborations

Sven Schuierer 5 collaborations

Florian Nigsch 5 collaborations

Ulrike Naumann 4 collaborations

Marilisa Neri 4 collaborations

Vanessa Orsini 3 collaborations

Jan S Tchorz 3 collaborations

Caroline Gubser Keller 3 collaborations

Caibin Sheng 2 collaborations

Judith Knehr 2 collaborations

Walter Carbone 2 collaborations

Panagiotis Papasaikas 2 collaborations

Michael B Stadler 2 collaborations

Ludivine Challet Meylan 2 collaborations

Prisca Liberali 2 collaborations

Tianliang Sun 2 collaborations

Sebastian Bergling 2 collaborations

Monika Pikiolek 2 collaborations

Luigi M Terracciano 2 collaborations

Tewis Bouwmeester 2 collaborations

Andreas W Sailer 2 collaborations

Feng Cong 2 collaborations

Philipp S Hoppe 2 collaborations

Martin Beibel 2 collaborations

Rui Lopes 1 collaboration

Kathleen Sprouffske 1 collaboration

Esther C H Uijttewaal 1 collaboration

Adriana Emma Wesdorp 1 collaboration

Jan Dahinden 1 collaboration

Simon Wengert 1 collaboration

Juan Diaz-Miyar 1 collaboration

Umut Yildiz 1 collaboration

Melusine Bleu 1 collaboration

Verena Apfel 1 collaboration

Fanny Mermet-Meillon 1 collaboration

Rok Krese 1 collaboration

Mathias Eder 1 collaboration

André Vidas Olsen 1 collaboration

Philipp Hoppe 1 collaboration

Marc Altorfer 1 collaboration

Joachim Weischenfeldt 1 collaboration

Antoine deWeck 1 collaboration

Audrey Kauffmann 1 collaboration

Dirk Schübeler 1 collaboration

Giorgio G Galli 1 collaboration

Cameron S Cowan 1 collaboration

Magdalena Renner 1 collaboration

Martina De Gennaro 1 collaboration

Brigitte Gross-Scherf 1 collaboration

David Goldblum 1 collaboration

Yanyan Hou 1 collaboration

Martin Munz 1 collaboration

Tiago M Rodrigues 1 collaboration

Jacek Krol 1 collaboration

Tamas Szikra 1 collaboration

Roland Diggelmann 1 collaboration

Claudia P Patino-Alvarez 1 collaboration

Patricia Galliker 1 collaboration

Stefan E Spirig 1 collaboration

Dinko Pavlinic 1 collaboration

Nadine Gerber-Hollbach 1 collaboration

Aldin Srdanovic 1 collaboration

Marton Balogh 1 collaboration

Riccardo Panero 1 collaboration

Akos Kusnyerik 1 collaboration

Arnold Szabo 1 collaboration

Selim Orgül 1 collaboration

Simone Picelli 1 collaboration

Pascal W Hasler 1 collaboration

Andreas Hierlemann 1 collaboration

Hendrik P N Scholl 1 collaboration

Botond Roska 1 collaboration

Denise Serra 1 collaboration

Urs Mayr 1 collaboration

Andrea Boni 1 collaboration

Ilya Lukonin 1 collaboration

Markus Rempfler 1 collaboration

Petr Strnad 1 collaboration

Dario Vischi 1 collaboration

David Johansson 1 collaboration

Céline Rauld 1 collaboration

Julien Roux 1 collaboration

Camille Regairaz 1 collaboration

Edoardo Galli 1 collaboration

Ilaria Callegari 1 collaboration

Layla Raad 1 collaboration

Martin Diebold 1 collaboration

Burkhard Becher 1 collaboration

Jens Kuhle 1 collaboration

Tobias Derfuss 1 collaboration

José M Carballido 1 collaboration

Nicholas S R Sanderson 1 collaboration

Stefano Annunziato 1 collaboration

Pascal Forcella 1 collaboration

Venkatesh Kancherla 1 collaboration

Sjoerd Holwerda 1 collaboration

Dilek Imanci 1 collaboration

Fabian Wu 1 collaboration

Lea F Puehringer 1 collaboration

Mevion Oertli 1 collaboration

Stefan Reinker 1 collaboration

Heinz Ruffner 1 collaboration

Elizabeth George 1 collaboration

Antoine de Weck 1 collaboration

Salvatore Piscuoglio 1 collaboration

Felix Lohmann 1 collaboration

Lara Planas-Paz 1 collaboration

Nadire R Cochran 1 collaboration

Zinger Yang 1 collaboration

Frederic Sigoillot 1 collaboration

Jasna Jetzer 1 collaboration

Maryam Syed 1 collaboration

Lapo Morelli 1 collaboration

Wibke Schwarzer 1 collaboration

Carlos M Cobos 1 collaboration

John L Alford 1 collaboration

Le Zhang 1 collaboration

Nicole Carballido-Perrig 1 collaboration

Bernd Kinzel 1 collaboration

Thomas B Nicholson 1 collaboration

Yi Yang 1 collaboration

Xiaohong Mao 1 collaboration

Carsten Russ 1 collaboration

John S Reece-Hoyes 1 collaboration

Linda E Greenbaum 1 collaboration

Jesse J Lugus 1 collaboration

Gregory McAllister 1 collaboration

Gregory R Hoffman 1 collaboration

Zhong-Yi Wang 1 collaboration

Adrian Keogh 1 collaboration

Shanshan Zhu 1 collaboration

Alexandra Ruchti 1 collaboration

Christophe Crochemore 1 collaboration

Julie Bastien 1 collaboration

Iwona Ksiazek 1 collaboration

Daniel Sánchez-Taltavull 1 collaboration

Hui Ge 1 collaboration

Jing Wu 1 collaboration

Stephen B Helliwell 1 collaboration

Deborah Stroka 1 collaboration

Fernanda do Valle Duraes 1 collaboration

Armelle Lafont 1 collaboration

Kea Martin 1 collaboration

Katy Darribat 1 collaboration

Grazyna Wieczorek 1 collaboration

Swann Gaulis 1 collaboration

Sabina Pfister 1 collaboration

Kirsten D Mertz 1 collaboration

Jianping Li 1 collaboration

Max Warncke 1 collaboration

Rebekka Wegmann 1 collaboration

Bilada Bilican 1 collaboration

Huyen Hartkopf 1 collaboration

Felipa Mapa 1 collaboration

Max R Salick 1 collaboration

Joe Raymond 1 collaboration

Ajamete Kaykas 1 collaboration

Rosemarie Ungricht 1 collaboration

Laure Guibbal 1 collaboration

Marie-Christine Lasbennes 1 collaboration

Anne Basler 1 collaboration

Dominic Hoepfner 1 collaboration

Rahul Dhandapani 1 collaboration

Mario Bernhard 1 collaboration

Irena Brzak 1 collaboration

Tatjana Schweizer 1 collaboration

Stefan Rudin 1 collaboration

Stefanie Joller 1 collaboration

Ramon Berth 1 collaboration

Jasmin Kernen 1 collaboration

Anna Neuhaus 1 collaboration

Dominik Feuerbach 1 collaboration

Derya R Shimshek 1 collaboration

Ulf Neumann 1 collaboration

Fabrizio Gasparini 1 collaboration

Ivan Galimberti 1 collaboration