Alexey Valeryevich Feofanov

Affiliations

Department of Bioengineering, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.

Publications (36)

Ratiometric Detection of Mercury (II) Ions in Living Cells Using Fluorescent Probe Based on Bis(styryl) Dye and Azadithia-15-Crown-5 Ether Receptor.

Sensors (Basel, Switzerland)

Avec: Pavel A Panchenko , Anastasija V Efremenko , Alexey V Feofanov , Mariya A Ustimova , Yuri V Fedorov , Olga A Fedorova

N-Terminal Tagging with GFP Enhances Selectivity of Agitoxin 2 to Kv1.3-Channel Binding Site.

Toxins

Avec: Oksana V Nekrasova , Alexandra L Primak , Anastasia A Ignatova , Valery N Novoseletsky , Olga V Geras'kina , Ksenia S Kudryashova , Sergey A Yakimov , Mikhail P Kirpichnikov , Alexander S Arseniev , Alexey V Feofanov

Projection structures reveal the position of the DNA within DNA-Dps Co-crystals.

Biochemical and biophysical research communications

Avec: Andrey Moiseenko , Natalia Loiko , Ksenia Tereshkina , Yana Danilova , Vladislav Kovalenko , Oleg Chertkov , Alexey V Feofanov , Yurii F Krupyanskii , Olga S Sokolova

Antibacterial activity of cardiotoxin-like basic polypeptide from cobra venom.

Bioorganic & medicinal chemistry letters

Avec: Peter V Dubovskii , Anastasia A Ignatova , Alexey V Feofanov , Yuri N Utkin , Roman G Efremov

Poly(ADP-Ribosyl) Code Functions.

Acta naturae

Avec: N V Maluchenko , D O Koshkina , A V Feofanov , V M Studitsky , M P Kirpichnikov

Electron microscopy analysis of ATP-independent nucleosome unfolding by FACT.

Communications biology

Avec: Anastasiia L Sivkina , Maria G Karlova , Maria E Valieva , Laura L McCullough , Timothy Formosa , Alexey K Shaytan , Alexey V Feofanov , Mikhail P Kirpichnikov , Olga S Sokolova , Vasily M Studitsky

GFP-Margatoxin, a Genetically Encoded Fluorescent Ligand to Probe Affinity of Kv1.3 Channel Blockers.

International journal of molecular sciences

Avec: Kristina R Denisova , Nikita A Orlov , Sergey A Yakimov , Elena A Kryukova , Dmitry A Dolgikh , Mikhail P Kirpichnikov , Alexey V Feofanov , Oksana V Nekrasova

Na

Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada

Avec: Tatyana V Andreeva , Natalya V Maluchenko , Anastasiia L Sivkina , Oleg V Chertkov , Maria E Valieva , Elena Y Kotova , Mikhail P Kirpichnikov , Vasily M Studitsky , Alexey V Feofanov

A New Glutathione-Cleavable Theranostic for Photodynamic Therapy Based on Bacteriochlorin e and Styrylnaphthalimide Derivatives.

Biosensors

Avec: Marina A Pavlova , Pavel A Panchenko , Ekaterina A Alekhina , Anastasia A Ignatova , Anna D Plyutinskaya , Andrey A Pankratov , Dmitriy A Pritmov , Mikhail A Grin , Alexey V Feofanov , Olga A Fedorova

Mechanisms of Nucleosome Reorganization by PARP1.

International journal of molecular sciences

Avec: Natalya V Maluchenko , Dmitry K Nilov , Sergey V Pushkarev , Elena Y Kotova , Nadezhda S Gerasimova , Mikhail P Kirpichnikov , Marie-France Langelier , John M Pascal , Md Sohail Akhtar , Alexey V Feofanov , Vasily M Studitsky

Artificial pore blocker acts specifically on voltage-gated potassium channel isoform K

The Journal of biological chemistry

Avec: Andrei M Gigolaev , Vladislav A Lushpa , Ernesto L Pinheiro-Junior , Valentin M Tabakmakher , Steve Peigneur , Anastasija A Ignatova , Alexey V Feofanov , Roman G Efremov , Konstantin S Mineev , Jan Tytgat , Alexander A Vassilevski

Atto488-Agitoxin 2-A Fluorescent Ligand with Increased Selectivity for Kv1.3 Channel Binding Site.

Bioengineering (Basel, Switzerland)

Avec: Kristina R Denisova , Nikita A Orlov , Sergey A Yakimov , Mikhail P Kirpichnikov , Alexey V Feofanov , Oksana V Nekrasova

Interactions of Nucleosomes with Acidic Patch-Binding Peptides: A Combined Structural Bioinformatics, Molecular Modeling, Fluorescence Polarization, and Single-Molecule FRET Study.

International journal of molecular sciences

Avec: Pavel D Oleinikov , Anastasiia S Fedulova , Grigoriy A Armeev , Nikita A Motorin , Lovepreet Singh-Palchevskaia , Anastasiia L Sivkina , Pavel G Feskin , Grigory S Glukhov , Dmitry A Afonin , Galina A Komarova , Mikhail P Kirpichnikov , Vasily M Studitsky , Alexey V Feofanov , Alexey K Shaytan

C-Type Natriuretic Peptide Acts as a Microorganism-Activated Regulator of the Skin Commensals

Biology

Avec: Maria A Ovcharova , Mikhail I Schelkunov , Olga V Geras'kina , Nadezhda E Makarova , Marina V Sukhacheva , Sergey V Martyanov , Ekaterina D Nevolina , Marina V Zhurina , Alexey V Feofanov , Ekaterina A Botchkova , Vladimir K Plakunov , Andrei V Gannesen

Application of RET Approach for Ratiometric Response Enhancement of ICT Fluorescent Hg2+ Probe Based on Crown-containing Styrylpyridinium Dye.

Chemistry, an Asian journal

Avec: Pavel Aleksandrovich Panchenko , Anastasija V Efremenko , Anna S Polyakova , Alexey V Feofanov , Maria A Ustimova , Yuri V Fedorov , Olga A Fedorova

Epinephrine affects gene expression levels and has a complex effect on biofilm formation in

Biofilm

Avec: A V Gannesen , M I Schelkunov , O V Geras'kina , N E Makarova , M V Sukhacheva , N D Danilova , M A Ovcharova , S V Mart'yanov , T A Pankratov , D S Muzychenko , M V Zhurina , A V Feofanov , E A Botchkova , V K Plakunov

Chimeras of KcsA and Kv1 as a bioengineering tool to study voltage-gated potassium channels and their ligands.

Biochemical pharmacology

Avec: Ksenia S Kudryashova , Oksana V Nekrasova , Mikhail P Kirpichnikov , Alexey V Feofanov

Human PARP1 Facilitates Transcription through a Nucleosome and Histone Displacement by Pol II In Vitro.

International journal of molecular sciences

Avec: Elena Y Kotova , Fu-Kai Hsieh , Han-Wen Chang , Natalia V Maluchenko , Marie-France Langelier , John M Pascal , Donal S Luse , Alexey V Feofanov , Vasily M Studitsky

Membrane-Disrupting Activity of Cobra Cytotoxins Is Determined by Configuration of the N-Terminal Loop.

Toxins

Avec: Peter V Dubovskii , Anastasia A Ignatova , Anna S Alekseeva , Vladislav G Starkov , Ivan A Boldyrev , Alexey V Feofanov , Yuri N Utkin

AgTx2-GFP, Fluorescent Blocker Targeting Pharmacologically Important K

Toxins

Avec: Alexandra L Primak , Nikita A Orlov , Steve Peigneur , Jan Tytgat , Anastasia A Ignatova , Kristina R Denisova , Sergey A Yakimov , Mikhail P Kirpichnikov , Oksana V Nekrasova , Alexey V Feofanov

Properties and Activity of Peptide Derivatives of ACE2 Cellular Receptor and Their Interaction with SARS-CoV-2 S Protein Receptor-Binding Domain.

Doklady. Biochemistry and biophysics

Avec: M V Sidorova , R S Bibilashvili , D V Avdeev , U S Kozhokar , M E Palkeeva , M V Ovchinnikov , A S Molokoedov , D A Shirokov , A V Semyonova , V I Uvarova , P O Kulyaev , E V Khvatov , A A Ignatova , A V Feofanov , D I Osolodkin , Yu B Porozov , L I Kozlovskaya , A A Ishmukhametov , Ye V Parfyonova , A M Egorov

Combining mKate2-Kv1.3 Channel and Atto488-Hongotoxin for the Studies of Peptide Pore Blockers on Living Eukaryotic Cells.

Toxins

Avec: Nikita A Orlov , Anastasia A Ignatova , Elena V Kryukova , Sergey A Yakimov , Mikhail P Kirpichnikov , Oksana V Nekrasova , Alexey V Feofanov

Epigallocatechin Gallate Affects the Structure of Chromatosomes, Nucleosomes and Their Complexes with PARP1.

International journal of molecular sciences

Avec: Tatiana V Andreeva , Natalya V Maluchenko , Anastasiya V Efremenko , Alexander V Lyubitelev , Anna N Korovina , Dmitry A Afonin , Mikhail P Kirpichnikov , Vasily M Studitsky , Alexey V Feofanov

The anti-cancer drugs curaxins target spatial genome organization.

Nature communications

Avec: Omar L Kantidze , Artem V Luzhin , Ekaterina V Nizovtseva , Alfiya Safina , Maria E Valieva , Arkadiy K Golov , Artem K Velichko , Alexander V Lyubitelev , Alexey V Feofanov , Katerina V Gurova , Vasily M Studitsky , Sergey V Razin

PARP-1-Associated Pathological Processes: Inhibition by Natural Polyphenols.

International journal of molecular sciences

Avec: Natalya V Maluchenko , Alexey V Feofanov , Vasily M Studitsky

Hmo1 Protein Affects the Nucleosome Structure and Supports the Nucleosome Reorganization Activity of Yeast FACT.

Cells

Avec: Daria K Malinina , Anastasiia L Sivkina , Anna N Korovina , Laura L McCullough , Tim Formosa , Mikhail P Kirpichnikov , Vasily M Studitsky , Alexey V Feofanov

N-Terminal Tails of Histones H2A and H2B Differentially Affect Transcription by RNA Polymerase II In Vitro.

Cells

Avec: Han-Wen Chang , Alexey V Feofanov , Alexander V Lyubitelev , Grigory A Armeev , Elena Y Kotova , Fu-Kai Hsieh , Mikhail P Kirpichnikov , Alexey K Shaytan , Vasily M Studitsky

Fluorescent RET-Based Chemosensor Bearing 1,8-Naphthalimide and Styrylpyridine Chromophores for Ratiometric Detection of Hg

Biosensors

Avec: Pavel A Panchenko , Anastasija V Efremenko , Anna S Polyakova , Alexey V Feofanov , Maria A Ustimova , Yuri V Fedorov , Olga A Fedorova

Interactions of the Kv1.1 Channel with Peptide Pore Blockers: A Fluorescent Analysis on Mammalian Cells.

Membranes

Avec: Nikita A Orlov , Elena V Kryukova , Anastasia V Efremenko , Sergey A Yakimov , Victoria A Toporova , Mikhail P Kirpichnikov , Oksana V Nekrasova , Alexey V Feofanov

Histone Tails Promote PARP1-Dependent Structural Rearrangements in Nucleosomes.

Doklady. Biochemistry and biophysics

Avec: N V Maluchenko , D S Sultanov , E Yu Kotova , M P Kirpichnikov , V M Studitsky , A V Feofanov

Bioengineered System for High Throughput Screening of Kv1 Ion Channel Blockers.

Bioengineering (Basel, Switzerland)

Avec: George V Sharonov , Oksana V Nekrasova , Ksenia S Kudryashova , Mikhail P Kirpichnikov , Alexey V Feofanov

Spatial Structure and Activity of Synthetic Fragments of Lynx1 and of Nicotinic Receptor Loop C Models.

Biomolecules

Avec: Konstantin S Mineev , Elena V Kryukova , Igor E Kasheverov , Natalia S Egorova , Maxim N Zhmak , Igor A Ivanov , Dmitry A Senko , Alexey V Feofanov , Anastasia A Ignatova , Alexander S Arseniev , Yuri N Utkin , Victor I Tsetlin

Atrial Natriuretic Peptide Affects Skin Commensal

Microorganisms

Avec: Maria Alekseevna Ovcharova , Olga Vyacheslavovna Geraskina , Natalya Dmitrievna Danilova , Ekaterina Alexandrovna Botchkova , Sergey Vladislavovich Martyanov , Alexey Valeryevich Feofanov , Vladimir Konstantinovich Plakunov , Andrei Vladislavovich Gannesen

Ratiometric i-Motif-Based Sensor for Precise Long-Term Monitoring of pH Micro Alterations in the Nucleoplasm and Interchromatin Granules.

ACS sensors

Avec: Nataliia A Petrunina , Alina S Shtork , Maria M Lukina , Vladimir B Tsvetkov , Yuri M Khodarovich , Alexey V Feofanov , Anastasia M Moysenovich , Eugene G Maksimov , Victoria O Shipunova , Timofei S Zatsepin , Alexandra N Bogomazova , Victoria O Shender , Andrey V Aralov , Maria A Lagarkova , Anna M Varizhuk

Structure and Dynamics of Compact Dinucleosomes: Analysis by Electron Microscopy and spFRET.

International journal of molecular sciences

Avec: Maria E Stefanova , Olesya I Volokh , Oleg V Chertkov , Grigory A Armeev , Alexey K Shaytan , Alexey V Feofanov , Mikhail P Kirpichnikov , Olga S Sokolova , Vasily M Studitsky

Histone Tetrasome Dynamics Affects Chromatin Transcription.

bioRxiv : the preprint server for biology

Avec: X Shi , A S Fedulova , E Y Kotova , N V Maluchenko , G A Armeev , Q Chen , C Prasanna , A L Sivkina , A V Feofanov , M P Kirpichnikov , L Nordensköld , A K Shaytan , V M Studitsky

Réseau de co-auteurs

Alexey V Feofanov 30 collaborations

Mikhail P Kirpichnikov 16 collaborations

Vasily M Studitsky 11 collaborations

Oksana V Nekrasova 8 collaborations

Anastasia A Ignatova 7 collaborations

Sergey A Yakimov 6 collaborations

A V Feofanov 5 collaborations

Nikita A Orlov 5 collaborations

Olga A Fedorova 4 collaborations

Anastasiia L Sivkina 4 collaborations

Alexey K Shaytan 4 collaborations

Natalya V Maluchenko 4 collaborations

Elena Y Kotova 4 collaborations

Pavel A Panchenko 3 collaborations

Anastasija V Efremenko 3 collaborations

Yuri V Fedorov 3 collaborations

Ksenia S Kudryashova 3 collaborations

Olga S Sokolova 3 collaborations

Yuri N Utkin 3 collaborations

N V Maluchenko 3 collaborations

V M Studitsky 3 collaborations

M P Kirpichnikov 3 collaborations

Maria E Valieva 3 collaborations

Kristina R Denisova 3 collaborations

Elena V Kryukova 3 collaborations

Alexander V Lyubitelev 3 collaborations

Alexandra L Primak 2 collaborations

Olga V Geras'kina 2 collaborations

Alexander S Arseniev 2 collaborations

Peter V Dubovskii 2 collaborations

Roman G Efremov 2 collaborations

Laura L McCullough 2 collaborations

Oleg V Chertkov 2 collaborations

Marie-France Langelier 2 collaborations

John M Pascal 2 collaborations

Steve Peigneur 2 collaborations

Konstantin S Mineev 2 collaborations

Jan Tytgat 2 collaborations

Dmitry A Afonin 2 collaborations

Anna S Polyakova 2 collaborations

Maria A Ustimova 2 collaborations

Fu-Kai Hsieh 2 collaborations

Han-Wen Chang 2 collaborations

Anna N Korovina 2 collaborations

Grigory A Armeev 2 collaborations

Mariya A Ustimova 1 collaboration

Valery N Novoseletsky 1 collaboration

Andrey Moiseenko 1 collaboration

Natalia Loiko 1 collaboration

Ksenia Tereshkina 1 collaboration

Yana Danilova 1 collaboration

Vladislav Kovalenko 1 collaboration

Oleg Chertkov 1 collaboration

Yurii F Krupyanskii 1 collaboration

D O Koshkina 1 collaboration

Maria G Karlova 1 collaboration

Timothy Formosa 1 collaboration

Elena A Kryukova 1 collaboration

Dmitry A Dolgikh 1 collaboration

Tatyana V Andreeva 1 collaboration

Marina A Pavlova 1 collaboration

Ekaterina A Alekhina 1 collaboration

Anna D Plyutinskaya 1 collaboration

Andrey A Pankratov 1 collaboration

Dmitriy A Pritmov 1 collaboration

Mikhail A Grin 1 collaboration

Dmitry K Nilov 1 collaboration

Sergey V Pushkarev 1 collaboration

Nadezhda S Gerasimova 1 collaboration

Md Sohail Akhtar 1 collaboration

Andrei M Gigolaev 1 collaboration

Vladislav A Lushpa 1 collaboration

Ernesto L Pinheiro-Junior 1 collaboration

Valentin M Tabakmakher 1 collaboration

Anastasija A Ignatova 1 collaboration

Alexander A Vassilevski 1 collaboration

Pavel D Oleinikov 1 collaboration

Anastasiia S Fedulova 1 collaboration

Grigoriy A Armeev 1 collaboration

Nikita A Motorin 1 collaboration

Lovepreet Singh-Palchevskaia 1 collaboration

Pavel G Feskin 1 collaboration

Grigory S Glukhov 1 collaboration

Galina A Komarova 1 collaboration

Maria A Ovcharova 1 collaboration

Mikhail I Schelkunov 1 collaboration

Nadezhda E Makarova 1 collaboration

Marina V Sukhacheva 1 collaboration

Sergey V Martyanov 1 collaboration

Ekaterina D Nevolina 1 collaboration

Marina V Zhurina 1 collaboration

Ekaterina A Botchkova 1 collaboration

Vladimir K Plakunov 1 collaboration

Andrei V Gannesen 1 collaboration

Pavel Aleksandrovich Panchenko 1 collaboration

A V Gannesen 1 collaboration

M I Schelkunov 1 collaboration

O V Geras'kina 1 collaboration

N E Makarova 1 collaboration

M V Sukhacheva 1 collaboration

N D Danilova 1 collaboration

M A Ovcharova 1 collaboration

S V Mart'yanov 1 collaboration

T A Pankratov 1 collaboration

D S Muzychenko 1 collaboration

M V Zhurina 1 collaboration

E A Botchkova 1 collaboration

V K Plakunov 1 collaboration

Natalia V Maluchenko 1 collaboration

Donal S Luse 1 collaboration

Anna S Alekseeva 1 collaboration

Vladislav G Starkov 1 collaboration

Ivan A Boldyrev 1 collaboration

M V Sidorova 1 collaboration

R S Bibilashvili 1 collaboration

D V Avdeev 1 collaboration

U S Kozhokar 1 collaboration

M E Palkeeva 1 collaboration

M V Ovchinnikov 1 collaboration

A S Molokoedov 1 collaboration

D A Shirokov 1 collaboration

A V Semyonova 1 collaboration

V I Uvarova 1 collaboration

P O Kulyaev 1 collaboration

E V Khvatov 1 collaboration

A A Ignatova 1 collaboration

D I Osolodkin 1 collaboration

Yu B Porozov 1 collaboration

L I Kozlovskaya 1 collaboration

A A Ishmukhametov 1 collaboration

Ye V Parfyonova 1 collaboration

A M Egorov 1 collaboration

Tatiana V Andreeva 1 collaboration

Anastasiya V Efremenko 1 collaboration

Omar L Kantidze 1 collaboration

Artem V Luzhin 1 collaboration

Ekaterina V Nizovtseva 1 collaboration

Alfiya Safina 1 collaboration

Arkadiy K Golov 1 collaboration

Artem K Velichko 1 collaboration

Katerina V Gurova 1 collaboration

Sergey V Razin 1 collaboration

Daria K Malinina 1 collaboration

Tim Formosa 1 collaboration

Anastasia V Efremenko 1 collaboration

Victoria A Toporova 1 collaboration

D S Sultanov 1 collaboration

E Yu Kotova 1 collaboration

George V Sharonov 1 collaboration

Igor E Kasheverov 1 collaboration

Natalia S Egorova 1 collaboration

Maxim N Zhmak 1 collaboration

Igor A Ivanov 1 collaboration

Dmitry A Senko 1 collaboration

Victor I Tsetlin 1 collaboration

Maria Alekseevna Ovcharova 1 collaboration

Olga Vyacheslavovna Geraskina 1 collaboration

Natalya Dmitrievna Danilova 1 collaboration

Ekaterina Alexandrovna Botchkova 1 collaboration

Sergey Vladislavovich Martyanov 1 collaboration

Vladimir Konstantinovich Plakunov 1 collaboration

Andrei Vladislavovich Gannesen 1 collaboration

Nataliia A Petrunina 1 collaboration

Alina S Shtork 1 collaboration

Maria M Lukina 1 collaboration

Vladimir B Tsvetkov 1 collaboration

Yuri M Khodarovich 1 collaboration

Anastasia M Moysenovich 1 collaboration

Eugene G Maksimov 1 collaboration

Victoria O Shipunova 1 collaboration

Timofei S Zatsepin 1 collaboration

Alexandra N Bogomazova 1 collaboration

Victoria O Shender 1 collaboration

Andrey V Aralov 1 collaboration

Maria A Lagarkova 1 collaboration

Anna M Varizhuk 1 collaboration

Maria E Stefanova 1 collaboration

Olesya I Volokh 1 collaboration

X Shi 1 collaboration

A S Fedulova 1 collaboration

E Y Kotova 1 collaboration

G A Armeev 1 collaboration

Q Chen 1 collaboration

C Prasanna 1 collaboration

A L Sivkina 1 collaboration

L Nordensköld 1 collaboration

A K Shaytan 1 collaboration