Agatha Treveil

Affiliations

Earlham Institute, Norwich, United Kingdom.
Gut Microbes and Health Programme, Quadram Institute Bioscience, Norwich, United Kingdom.

Publications (11)

SARS-CoV-2 Causes a Different Cytokine Response Compared to Other Cytokine Storm-Causing Respiratory Viruses in Severely Ill Patients.

Frontiers in immunology

Avec: Marton Olbei , Isabelle Hautefort , Dezso Modos , Agatha Treveil , Martina Poletti , Lejla Gul , Claire D Shannon-Lowe , Tamas Korcsmaros

COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms.

Molecular systems biology

Avec: Marek Ostaszewski , Anna Niarakis , Alexander Mazein , Inna Kuperstein , Robert Phair , Aurelio Orta-Resendiz , Vidisha Singh , Sara Sadat Aghamiri , Marcio Luis Acencio , Enrico Glaab , Andreas Ruepp , Gisela Fobo , Corinna Montrone , Barbara Brauner , Goar Frishman , Luis Cristóbal Monraz Gómez , Julia Somers , Matti Hoch , Shailendra Kumar Gupta , Julia Scheel , Hanna Borlinghaus , Tobias Czauderna , Falk Schreiber , Arnau Montagud , Miguel Ponce de Leon , Akira Funahashi , Yusuke Hiki , Noriko Hiroi , Takahiro G Yamada , Andreas Dräger , Alina Renz , Muhammad Naveez , Zsolt Bocskei , Francesco Messina , Daniela Börnigen , Liam Fergusson , Marta Conti , Marius Rameil , Vanessa Nakonecnij , Jakob Vanhoefer , Leonard Schmiester , Muying Wang , Emily E Ackerman , Jason E Shoemaker , Jeremy Zucker , Kristie Oxford , Jeremy Teuton , Ebru Kocakaya , Gökçe Yağmur Summak , Kristina Hanspers , Martina Kutmon , Susan Coort , Lars Eijssen , Friederike Ehrhart , Devasahayam Arokia Balaya Rex , Denise Slenter , Marvin Martens , Nhung Pham , Robin Haw , Bijay Jassal , Lisa Matthews , Marija Orlic-Milacic , Andrea Senff Ribeiro , Karen Rothfels , Veronica Shamovsky , Ralf Stephan , Cristoffer Sevilla , Thawfeek Varusai , Jean-Marie Ravel , Rupsha Fraser , Vera Ortseifen , Silvia Marchesi , Piotr Gawron , Ewa Smula , Laurent Heirendt , Venkata Satagopam , Guanming Wu , Anders Riutta , Martin Golebiewski , Stuart Owen , Carole Goble , Xiaoming Hu , Rupert W Overall , Dieter Maier , Angela Bauch , Benjamin M Gyori , John A Bachman , Carlos Vega , Valentin Grouès , Miguel Vazquez , Pablo Porras , Luana Licata , Marta Iannuccelli , Francesca Sacco , Anastasia Nesterova , Anton Yuryev , Anita de Waard , Denes Turei , Augustin Luna , Ozgun Babur , Sylvain Soliman , Alberto Valdeolivas , Marina Esteban-Medina , Maria Peña-Chilet , Kinza Rian , Tomáš Helikar , Bhanwar Lal Puniya , Dezso Modos , Agatha Treveil , Marton Olbei , Bertrand De Meulder , Stephane Ballereau , Aurélien Dugourd , Aurélien Naldi , Vincent Noël , Laurence Calzone , Chris Sander , Emek Demir , Tamas Korcsmaros , Tom C Freeman , Franck Augé , Jacques S Beckmann , Jan Hasenauer , Olaf Wolkenhauer , Egon L Wilighagen , Alexander R Pico , Chris T Evelo , Marc E Gillespie , Lincoln D Stein , Henning Hermjakob , Peter D'Eustachio , Julio Saez-Rodriguez , Joaquin Dopazo , Alfonso Valencia , Hiroaki Kitano , Emmanuel Barillot , Charles Auffray , Rudi Balling , Reinhard Schneider , Auteur inconnu

Interleukin-22 regulates neutrophil recruitment in ulcerative colitis and is associated with resistance to ustekinumab therapy.

Nature communications

Avec: Polychronis Pavlidis , Anastasia Tsakmaki , Eirini Pantazi , Katherine Li , Domenico Cozzetto , Jonathan Digby-Bell , Feifei Yang , Jonathan W Lo , Elena Alberts , Ana Caroline Costa Sa , Umar Niazi , Joshua Friedman , Anna K Long , Yuchun Ding , Christopher D Carey , Christopher Lamb , Mansoor Saqi , Matthew Madgwick , Leila Gul , Agatha Treveil , Tamas Korcsmaros , Thomas T Macdonald , Graham M Lord , Gavin Bewick , Nick Powell

Nutrients

Avec: Deborah Püngel , Agatha Treveil , Matthew J Dalby , Shabhonam Caim , Ian J Colquhoun , Catherine Booth , Jennifer Ketskemety , Tamas Korcsmaros , Douwe van Sinderen , Melissa Ae Lawson , Lindsay J Hall

CytokineLink: A Cytokine Communication Map to Analyse Immune Responses-Case Studies in Inflammatory Bowel Disease and COVID-19.

Cells

Avec: Marton Olbei , John P Thomas , Isabelle Hautefort , Agatha Treveil , Balazs Bohar , Matthew Madgwick , Lejla Gul , Luca Csabai , Dezso Modos , Tamas Korcsmaros

Cytokine responsive networks in human colonic epithelial organoids unveil a molecular classification of inflammatory bowel disease.

Cell reports

Avec: Polychronis Pavlidis , Anastasia Tsakmaki , Agatha Treveil , Katherine Li , Domenico Cozzetto , Feifei Yang , Umar Niazi , Bu Hussain Hayee , Mansoor Saqi , Joshua Friedman , Tamas Korcsmaros , Gavin Bewick , Nick Powell

Bifidobacterium breve UCC2003 Induces a Distinct Global Transcriptomic Program in Neonatal Murine Intestinal Epithelial Cells.

iScience

Avec: Raymond Kiu , Agatha Treveil , Lukas C Harnisch , Shabhonam Caim , Charlotte Leclaire , Douwe van Sinderen , Tamas Korcsmaros , Lindsay J Hall

Regulatory network analysis of Paneth cell and goblet cell enriched gut organoids using transcriptomics approaches.

Molecular omics

Avec: A Treveil , P Sudhakar , Z J Matthews , T Wrzesiński , E J Jones , J Brooks , M Ölbei , I Hautefort , L J Hall , S R Carding , U Mayer , P P Powell , T Wileman , F Di Palma , W Haerty , T Korcsmáros

Integrative analysis of Paneth cell proteomic and transcriptomic data from intestinal organoids reveals functional processes dependent on autophagy.

Disease models & mechanisms

Avec: Emily J Jones , Zoe J Matthews , Lejla Gul , Padhmanand Sudhakar , Agatha Treveil , Devina Divekar , Jasmine Buck , Tomasz Wrzesinski , Matthew Jefferson , Stuart D Armstrong , Lindsay J Hall , Alastair J M Watson , Simon R Carding , Wilfried Haerty , Federica Di Palma , Ulrike Mayer , Penny P Powell , Isabelle Hautefort , Tom Wileman , Tamas Korcsmaros

ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways.

PLoS computational biology

Avec: Agatha Treveil , Balazs Bohar , Padhmanand Sudhakar , Lejla Gul , Luca Csabai , Marton Olbei , Martina Poletti , Matthew Madgwick , Tahila Andrighetti , Isabelle Hautefort , Dezso Modos , Tamas Korcsmaros

Mapping the epithelial-immune cell interactome upon infection in the gut and the upper airways.

NPJ systems biology and applications

Avec: Martina Poletti , Agatha Treveil , Luca Csabai , Leila Gul , Dezso Modos , Matthew Madgwick , Marton Olbei , Balazs Bohar , Alberto Valdeolivas , Denes Turei , Bram Verstockt , Sergio Triana , Theodore Alexandrov , Julio Saez-Rodriguez , Megan L Stanifer , Steeve Boulant , Tamas Korcsmaros

Réseau de co-auteurs

Tamas Korcsmaros 10 collaborations

Marton Olbei 5 collaborations

Dezso Modos 5 collaborations

Isabelle Hautefort 4 collaborations

Lejla Gul 4 collaborations

Matthew Madgwick 4 collaborations

Martina Poletti 3 collaborations

Lindsay J Hall 3 collaborations

Balazs Bohar 3 collaborations

Luca Csabai 3 collaborations

Denes Turei 2 collaborations

Alberto Valdeolivas 2 collaborations

Julio Saez-Rodriguez 2 collaborations

Polychronis Pavlidis 2 collaborations

Anastasia Tsakmaki 2 collaborations

Katherine Li 2 collaborations

Domenico Cozzetto 2 collaborations

Feifei Yang 2 collaborations

Umar Niazi 2 collaborations

Joshua Friedman 2 collaborations

Mansoor Saqi 2 collaborations

Leila Gul 2 collaborations

Gavin Bewick 2 collaborations

Nick Powell 2 collaborations

Shabhonam Caim 2 collaborations

Douwe van Sinderen 2 collaborations

Padhmanand Sudhakar 2 collaborations

Claire D Shannon-Lowe 1 collaboration

Marek Ostaszewski 1 collaboration

Anna Niarakis 1 collaboration

Alexander Mazein 1 collaboration

Inna Kuperstein 1 collaboration

Robert Phair 1 collaboration

Aurelio Orta-Resendiz 1 collaboration

Vidisha Singh 1 collaboration

Sara Sadat Aghamiri 1 collaboration

Marcio Luis Acencio 1 collaboration

Enrico Glaab 1 collaboration

Andreas Ruepp 1 collaboration

Gisela Fobo 1 collaboration

Corinna Montrone 1 collaboration

Barbara Brauner 1 collaboration

Goar Frishman 1 collaboration

Luis Cristóbal Monraz Gómez 1 collaboration

Julia Somers 1 collaboration

Matti Hoch 1 collaboration

Shailendra Kumar Gupta 1 collaboration

Julia Scheel 1 collaboration

Hanna Borlinghaus 1 collaboration

Tobias Czauderna 1 collaboration

Falk Schreiber 1 collaboration

Arnau Montagud 1 collaboration

Miguel Ponce de Leon 1 collaboration

Akira Funahashi 1 collaboration

Yusuke Hiki 1 collaboration

Noriko Hiroi 1 collaboration

Takahiro G Yamada 1 collaboration

Andreas Dräger 1 collaboration

Alina Renz 1 collaboration

Muhammad Naveez 1 collaboration

Zsolt Bocskei 1 collaboration

Francesco Messina 1 collaboration

Daniela Börnigen 1 collaboration

Liam Fergusson 1 collaboration

Marta Conti 1 collaboration

Marius Rameil 1 collaboration

Vanessa Nakonecnij 1 collaboration

Jakob Vanhoefer 1 collaboration

Leonard Schmiester 1 collaboration

Muying Wang 1 collaboration

Emily E Ackerman 1 collaboration

Jason E Shoemaker 1 collaboration

Jeremy Zucker 1 collaboration

Kristie Oxford 1 collaboration

Jeremy Teuton 1 collaboration

Ebru Kocakaya 1 collaboration

Gökçe Yağmur Summak 1 collaboration

Kristina Hanspers 1 collaboration

Martina Kutmon 1 collaboration

Susan Coort 1 collaboration

Lars Eijssen 1 collaboration

Friederike Ehrhart 1 collaboration

Devasahayam Arokia Balaya Rex 1 collaboration

Denise Slenter 1 collaboration

Marvin Martens 1 collaboration

Nhung Pham 1 collaboration

Robin Haw 1 collaboration

Bijay Jassal 1 collaboration

Lisa Matthews 1 collaboration

Marija Orlic-Milacic 1 collaboration

Andrea Senff Ribeiro 1 collaboration

Karen Rothfels 1 collaboration

Veronica Shamovsky 1 collaboration

Ralf Stephan 1 collaboration

Cristoffer Sevilla 1 collaboration

Thawfeek Varusai 1 collaboration

Jean-Marie Ravel 1 collaboration

Rupsha Fraser 1 collaboration

Vera Ortseifen 1 collaboration

Silvia Marchesi 1 collaboration

Piotr Gawron 1 collaboration

Ewa Smula 1 collaboration

Laurent Heirendt 1 collaboration

Venkata Satagopam 1 collaboration

Guanming Wu 1 collaboration

Anders Riutta 1 collaboration

Martin Golebiewski 1 collaboration

Stuart Owen 1 collaboration

Carole Goble 1 collaboration

Xiaoming Hu 1 collaboration

Rupert W Overall 1 collaboration

Dieter Maier 1 collaboration

Angela Bauch 1 collaboration

Benjamin M Gyori 1 collaboration

John A Bachman 1 collaboration

Carlos Vega 1 collaboration

Valentin Grouès 1 collaboration

Miguel Vazquez 1 collaboration

Pablo Porras 1 collaboration

Luana Licata 1 collaboration

Marta Iannuccelli 1 collaboration

Francesca Sacco 1 collaboration

Anastasia Nesterova 1 collaboration

Anton Yuryev 1 collaboration

Anita de Waard 1 collaboration

Augustin Luna 1 collaboration

Ozgun Babur 1 collaboration

Sylvain Soliman 1 collaboration

Marina Esteban-Medina 1 collaboration

Maria Peña-Chilet 1 collaboration

Kinza Rian 1 collaboration

Tomáš Helikar 1 collaboration

Bhanwar Lal Puniya 1 collaboration

Bertrand De Meulder 1 collaboration

Stephane Ballereau 1 collaboration

Aurélien Dugourd 1 collaboration

Aurélien Naldi 1 collaboration

Vincent Noël 1 collaboration

Laurence Calzone 1 collaboration

Chris Sander 1 collaboration

Emek Demir 1 collaboration

Tom C Freeman 1 collaboration

Franck Augé 1 collaboration

Jacques S Beckmann 1 collaboration

Jan Hasenauer 1 collaboration

Olaf Wolkenhauer 1 collaboration

Egon L Wilighagen 1 collaboration

Alexander R Pico 1 collaboration

Chris T Evelo 1 collaboration

Marc E Gillespie 1 collaboration

Lincoln D Stein 1 collaboration

Henning Hermjakob 1 collaboration

Peter D'Eustachio 1 collaboration

Joaquin Dopazo 1 collaboration

Alfonso Valencia 1 collaboration

Hiroaki Kitano 1 collaboration

Emmanuel Barillot 1 collaboration

Charles Auffray 1 collaboration

Rudi Balling 1 collaboration

Reinhard Schneider 1 collaboration

None None 1 collaboration

Eirini Pantazi 1 collaboration

Jonathan Digby-Bell 1 collaboration

Jonathan W Lo 1 collaboration

Elena Alberts 1 collaboration

Ana Caroline Costa Sa 1 collaboration

Anna K Long 1 collaboration

Yuchun Ding 1 collaboration

Christopher D Carey 1 collaboration

Christopher Lamb 1 collaboration

Thomas T Macdonald 1 collaboration

Graham M Lord 1 collaboration

Deborah Püngel 1 collaboration

Matthew J Dalby 1 collaboration

Ian J Colquhoun 1 collaboration

Catherine Booth 1 collaboration

Jennifer Ketskemety 1 collaboration

Melissa Ae Lawson 1 collaboration

John P Thomas 1 collaboration

Bu Hussain Hayee 1 collaboration

Raymond Kiu 1 collaboration

Lukas C Harnisch 1 collaboration

Charlotte Leclaire 1 collaboration

A Treveil 1 collaboration

P Sudhakar 1 collaboration

Z J Matthews 1 collaboration

T Wrzesiński 1 collaboration

E J Jones 1 collaboration

J Brooks 1 collaboration

M Ölbei 1 collaboration

I Hautefort 1 collaboration

L J Hall 1 collaboration

S R Carding 1 collaboration

U Mayer 1 collaboration

P P Powell 1 collaboration

T Wileman 1 collaboration

F Di Palma 1 collaboration

W Haerty 1 collaboration

T Korcsmáros 1 collaboration

Emily J Jones 1 collaboration

Zoe J Matthews 1 collaboration

Devina Divekar 1 collaboration

Jasmine Buck 1 collaboration

Tomasz Wrzesinski 1 collaboration

Matthew Jefferson 1 collaboration

Stuart D Armstrong 1 collaboration

Alastair J M Watson 1 collaboration

Simon R Carding 1 collaboration

Wilfried Haerty 1 collaboration

Federica Di Palma 1 collaboration

Ulrike Mayer 1 collaboration

Penny P Powell 1 collaboration

Tom Wileman 1 collaboration

Tahila Andrighetti 1 collaboration

Bram Verstockt 1 collaboration

Sergio Triana 1 collaboration

Theodore Alexandrov 1 collaboration

Megan L Stanifer 1 collaboration

Steeve Boulant 1 collaboration