Sinem Demirkaya-Budak

Affiliations

Department of Biomedical Engineering, TOBB University of Economics and Technology , Ankara, Turkey.

ORCID: 0000-0003-3500-2682

Publications (7)

Evaluation of Tear Fluid and Aqueous Humor Concentration of Clusterin as Biomarkers for Early Diagnosis of Pseudoexfoliation Syndrome and Pseudoexfoliative Glaucoma.

Current eye research

Avec: Birsen Can Demirdöğen , Gökhan Özge , Tarkan Mumcuoğlu

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.

Cell genomics

Avec: Nathan D Olson , Justin Wagner , Jennifer McDaniel , Sarah H Stephens , Samuel T Westreich , Anish G Prasanna , Elaine Johanson , Emily Boja , Ezekiel J Maier , Omar Serang , David Jáspez , José M Lorenzo-Salazar , Adrián Muñoz-Barrera , Luis A Rubio-Rodríguez , Carlos Flores , Konstantinos Kyriakidis , Andigoni Malousi , Kishwar Shafin , Trevor Pesout , Miten Jain , Benedict Paten , Pi-Chuan Chang , Alexey Kolesnikov , Maria Nattestad , Gunjan Baid , Sidharth Goel , Howard Yang , Andrew Carroll , Robert Eveleigh , Mathieu Bourgey , Guillaume Bourque , Gen Li , ChouXian Ma , LinQi Tang , YuanPing Du , ShaoWei Zhang , Jordi Morata , Raúl Tonda , Genís Parra , Jean-Rémi Trotta , Christian Brueffer , Duygu Kabakci-Zorlu , Deniz Turgut , Özem Kalay , Gungor Budak , Kübra Narcı , Elif Arslan , Richard Brown , Ivan J Johnson , Alexey Dolgoborodov , Vladimir Semenyuk , Amit Jain , H Serhat Tetikol , Varun Jain , Mike Ruehle , Bryan Lajoie , Cooper Roddey , Severine Catreux , Rami Mehio , Mian Umair Ahsan , Qian Liu , Kai Wang , Sayed Mohammad Ebrahim Sahraeian , Li Tai Fang , Marghoob Mohiyuddin , Calvin Hung , Chirag Jain , Hanying Feng , Zhipan Li , Luoqi Chen , Fritz J Sedlazeck , Justin M Zook

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.

Cell genomics

Avec: Nathan D Olson , Justin Wagner , Jennifer McDaniel , Sarah H Stephens , Samuel T Westreich , Anish G Prasanna , Elaine Johanson , Emily Boja , Ezekiel J Maier , Omar Serang , David Jáspez , José M Lorenzo-Salazar , Adrián Muñoz-Barrera , Luis A Rubio-Rodríguez , Carlos Flores , Konstantinos Kyriakidis , Andigoni Malousi , Kishwar Shafin , Trevor Pesout , Miten Jain , Benedict Paten , Pi-Chuan Chang , Alexey Kolesnikov , Maria Nattestad , Gunjan Baid , Sidharth Goel , Howard Yang , Andrew Carroll , Robert Eveleigh , Mathieu Bourgey , Guillaume Bourque , Gen Li , ChouXian Ma , LinQi Tang , YuanPing Du , ShaoWei Zhang , Jordi Morata , Raúl Tonda , Genís Parra , Jean-Rémi Trotta , Christian Brueffer , Duygu Kabakci-Zorlu , Deniz Turgut , Özem Kalay , Gungor Budak , Kübra Narcı , Elif Arslan , Richard Brown , Ivan J Johnson , Alexey Dolgoborodov , Vladimir Semenyuk , Amit Jain , H Serhat Tetikol , Varun Jain , Mike Ruehle , Bryan Lajoie , Cooper Roddey , Severine Catreux , Rami Mehio , Mian Umair Ahsan , Qian Liu , Kai Wang , Sayed Mohammad Ebrahim Sahraeian , Li Tai Fang , Marghoob Mohiyuddin , Calvin Hung , Chirag Jain , Hanying Feng , Zhipan Li , Luoqi Chen , Fritz J Sedlazeck , Justin M Zook

Pan-African genome demonstrates how population-specific genome graphs improve high-throughput sequencing data analysis.

Nature communications

Avec: H Serhat Tetikol , Deniz Turgut , Kubra Narci , Gungor Budak , Ozem Kalay , Elif Arslan , Alexey Dolgoborodov , Duygu Kabakci-Zorlu , Vladimir Semenyuk , Amit Jain , Brandi N Davis-Dusenbery

Influence of clusterin genetic variants on IOP elevation in pseudoexfoliation syndrome and pseudoexfoliative glaucoma in Turkish population.

BMC ophthalmology

Avec: Birsen Can Demirdöğen ,

Paraoxonase 1 (PON1) promoter (-107T/C) and coding region (192Q/R and 55L/M) genetic variations in pseudoexfoliation syndrome and pseudoexfoliative glaucoma risk.

Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie

Avec: Birsen Can Demirdöğen , Canan Koçan Akçin , Ezgi Göksoy , Gizem Yakar , Tuğçe Öztepe , Sinan Oflaz

Automated Identification of Germline

bioRxiv : the preprint server for biology

Avec: Mariya Shadrina , Özem Kalay , Charles A LeDuc , Wendy K Chung , Deniz Turgut , Gungor Budak , Elif Arslan , Vladimir Semenyuk , Brandi Davis-Dusenbery , Christine E Seidman , H Joseph Yost , Amit Jain , Bruce D Gelb

Réseau de co-auteurs

Deniz Turgut 4 collaborations

Gungor Budak 4 collaborations

Elif Arslan 4 collaborations

Vladimir Semenyuk 4 collaborations

Amit Jain 4 collaborations

Birsen Can Demirdöğen 3 collaborations

Duygu Kabakci-Zorlu 3 collaborations

Özem Kalay 3 collaborations

Alexey Dolgoborodov 3 collaborations

H Serhat Tetikol 3 collaborations

Nathan D Olson 2 collaborations

Justin Wagner 2 collaborations

Jennifer McDaniel 2 collaborations

Sarah H Stephens 2 collaborations

Samuel T Westreich 2 collaborations

Anish G Prasanna 2 collaborations

Elaine Johanson 2 collaborations

Emily Boja 2 collaborations

Ezekiel J Maier 2 collaborations

Omar Serang 2 collaborations

David Jáspez 2 collaborations

José M Lorenzo-Salazar 2 collaborations

Adrián Muñoz-Barrera 2 collaborations

Luis A Rubio-Rodríguez 2 collaborations

Carlos Flores 2 collaborations

Konstantinos Kyriakidis 2 collaborations

Andigoni Malousi 2 collaborations

Kishwar Shafin 2 collaborations

Trevor Pesout 2 collaborations

Miten Jain 2 collaborations

Benedict Paten 2 collaborations

Pi-Chuan Chang 2 collaborations

Alexey Kolesnikov 2 collaborations

Maria Nattestad 2 collaborations

Gunjan Baid 2 collaborations

Sidharth Goel 2 collaborations

Howard Yang 2 collaborations

Andrew Carroll 2 collaborations

Robert Eveleigh 2 collaborations

Mathieu Bourgey 2 collaborations

Guillaume Bourque 2 collaborations

Gen Li 2 collaborations

ChouXian Ma 2 collaborations

LinQi Tang 2 collaborations

YuanPing Du 2 collaborations

ShaoWei Zhang 2 collaborations

Jordi Morata 2 collaborations

Raúl Tonda 2 collaborations

Genís Parra 2 collaborations

Jean-Rémi Trotta 2 collaborations

Christian Brueffer 2 collaborations

Kübra Narcı 2 collaborations

Richard Brown 2 collaborations

Ivan J Johnson 2 collaborations

Varun Jain 2 collaborations

Mike Ruehle 2 collaborations

Bryan Lajoie 2 collaborations

Cooper Roddey 2 collaborations

Severine Catreux 2 collaborations

Rami Mehio 2 collaborations

Mian Umair Ahsan 2 collaborations

Qian Liu 2 collaborations

Kai Wang 2 collaborations

Sayed Mohammad Ebrahim Sahraeian 2 collaborations

Li Tai Fang 2 collaborations

Marghoob Mohiyuddin 2 collaborations

Calvin Hung 2 collaborations

Chirag Jain 2 collaborations

Hanying Feng 2 collaborations

Zhipan Li 2 collaborations

Luoqi Chen 2 collaborations

Fritz J Sedlazeck 2 collaborations

Justin M Zook 2 collaborations

Gökhan Özge 1 collaboration

Tarkan Mumcuoğlu 1 collaboration

Kubra Narci 1 collaboration

Ozem Kalay 1 collaboration

Brandi N Davis-Dusenbery 1 collaboration

Canan Koçan Akçin 1 collaboration

Ezgi Göksoy 1 collaboration

Gizem Yakar 1 collaboration

Tuğçe Öztepe 1 collaboration

Sinan Oflaz 1 collaboration

Mariya Shadrina 1 collaboration

Charles A LeDuc 1 collaboration

Wendy K Chung 1 collaboration

Brandi Davis-Dusenbery 1 collaboration

Christine E Seidman 1 collaboration

H Joseph Yost 1 collaboration

Bruce D Gelb 1 collaboration