Ruben Vanholme

Affiliations

Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
VIB-UGent, Center for Plant Systems Biology, Ghent, Belgium.

Publications (22)

Downregulation of barley ferulate 5-hydroxylase dramatically alters straw lignin structure without impact on mechanical properties.

Frontiers in plant science

Avec: Reza Shafiei , Matthew Hooper , Christopher McClellan , Helena Oakey , Jennifer Stephens , Catherine Lapierre , Yukiko Tsuji , Geert Goeminne , Wout Boerjan , John Ralph , Claire Halpin

Suppression of the Arabidopsis cinnamoyl-CoA reductase 1-6 intronic T-DNA mutation by epigenetic modification.

Plant physiology

Avec: Marlies Wouters , Héloïse Bastiaanse , Stephane Rombauts , Lisanne de Vries , Tim De Pooter , Mojca Strazisar , Godfrey Neutelings , Wout Boerjan

Microparticle-mediated CRISPR DNA delivery for genome editing in poplar.

Frontiers in plant science

Avec: Lennart Hoengenaert , Jan Van Doorsselaere , Wout Boerjan

QT-GWAS: A novel method for unveiling biosynthetic loci affecting qualitative metabolic traits.

Molecular plant

Avec: Marlies Brouckaert , Meng Peng , René Höfer , Ilias El Houari , Chiarina Darrah , Véronique Storme , Yvan Saeys , Geert Goeminne , Vitaliy I Timokhin , John Ralph , Kris Morreel , Wout Boerjan

Extracellular vesicles of Norway spruce contain precursors and enzymes for lignin formation and salicylic acid.

Plant physiology

Avec: Santeri Kankaanpää , Enni Väisänen , Geert Goeminne , Rabah Soliymani , Sandrien Desmet , Anatoliy Samoylenko , Seppo Vainio , Gunnar Wingsle , Wout Boerjan , Anna Kärkönen

Lignin biosynthesis and its integration into metabolism.

Current opinion in biotechnology

Avec: Barbara De Meester , John Ralph , Wout Boerjan

Tailoring poplar lignin without yield penalty by combining a null and haploinsufficient CINNAMOYL-CoA REDUCTASE2 allele.

Nature communications

Avec: Barbara De Meester , Barbara Madariaga Calderón , Lisanne de Vries , Jacob Pollier , Geert Goeminne , Jan Van Doorsselaere , Mingjie Chen , John Ralph , Wout Boerjan

Hydroxycinnamaldehyde-derived benzofuran components in lignins.

Plant physiology

Avec: Koichi Yoshioka , Hoon Kim , Fachuang Lu , Nette De Ridder , Shinya Kajita , Wout Boerjan , John Ralph

Maize specialized metabolome networks reveal organ-preferential mixed glycosides.

Computational and structural biotechnology journal

Avec: Sandrien Desmet , Yvan Saeys , Kevin Verstaen , Rebecca Dauwe , Hoon Kim , Claudiu Niculaes , Atsushi Fukushima , Geert Goeminne , John Ralph , Wout Boerjan , Kris Morreel

RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family.

Plant biotechnology journal

Avec: Paul Daly , Christopher McClellan , Marta Maluk , Helena Oakey , Catherine Lapierre , Robbie Waugh , Jennifer Stephens , David Marshall , Abdellah Barakate , Yukiko Tsuji , Geert Goeminne , Wout Boerjan , John Ralph , Claire Halpin

COSY catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins.

Nature plants

Avec: Lisa Sundin , Keletso Carol Seetso , Hoon Kim , Xinyu Liu , Jin Li , Barbara De Meester , Lennart Hoengenaert , Geert Goeminne , Kris Morreel , Jurgen Haustraete , Huei-Hsuan Tsai , Wolfgang Schmidt , Bartel Vanholme , John Ralph , Wout Boerjan

Introducing curcumin biosynthesis in Arabidopsis enhances lignocellulosic biomass processing.

Nature plants

Avec: Paula Oyarce , Barbara De Meester , Fernando Fonseca , Lisanne de Vries , Geert Goeminne , Andreas Pallidis , Riet De Rycke , Yukiko Tsuji , Yanding Li , Sander Van den Bosch , Bert Sels , John Ralph , Wout Boerjan

Lignin engineering in forest trees: From gene discovery to field trials.

Plant communications

Avec: Barbara De Meester , Thatiane Mota , Wout Boerjan

Reassessing the claimed cytokinin-substituting activity of dehydrodiconiferyl alcohol glucoside.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Klaas Witvrouw , Hoon Kim , Geert Goeminne , John Ralph , Wout Boerjan , Bartel Vanholme

PIRIN2 suppresses S-type lignin accumulation in a noncell-autonomous manner in Arabidopsis xylem elements.

The New phytologist

Avec: Bo Zhang , Bernadette Sztojka , Sacha Escamez , Mattias Hedenström , Yin Wang , Halbay Turumtay , András Gorzsás , Wout Boerjan , Hannele Tuominen

Vessel- and ray-specific monolignol biosynthesis as an approach to engineer fiber-hypolignification and enhanced saccharification in poplar.

The Plant journal : for cell and molecular biology

Avec: Barbara De Meester , Lisanne de Vries , Marlies Wouters , Jan Van Doorsselaere , Wout Boerjan

CRISPR-Cas9 editing of CAFFEOYL SHIKIMATE ESTERASE 1 and 2 shows their importance and partial redundancy in lignification in Populus tremula × P. alba.

Plant biotechnology journal

Avec: Lisanne de Vries , Marlies Brouckaert , Alexandra Chanoca , Hoon Kim , Matthew R Regner , Vitaliy I Timokhin , Yi Sun , Barbara De Meester , Jan Van Doorsselaere , Geert Goeminne , Vincent L Chiang , Jack P Wang , John Ralph , Kris Morreel , Wout Boerjan

Rewired phenolic metabolism and improved saccharification efficiency of a Zea mays cinnamyl alcohol dehydrogenase 2 (zmcad2) mutant.

The Plant journal : for cell and molecular biology

Avec: Xinyu Liu , Rebecca Van Acker , Wannes Voorend , Andreas Pallidis , Geert Goeminne , Jacob Pollier , Kris Morreel , Hoon Kim , Hilde Muylle , Mickael Bosio , John Ralph , Wout Boerjan

Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen.

The Plant journal : for cell and molecular biology

Avec: Shi Hu , Naofumi Kamimura , Shingo Sakamoto , Soichiro Nagano , Naoki Takata , Sarah Liu , Geert Goeminne , Mikiko Uesugi , Masanobu Yamamoto , Shojiro Hishiyama , Hoon Kim , Wout Boerjan , John Ralph , Eiji Masai , Nobutaka Mitsuda , Shinya Kajita

Engineering Curcumin Biosynthesis in Poplar Affects Lignification and Biomass Yield.

Frontiers in plant science

Avec: Barbara De Meester , Paula Oyarce , Rebecca Van Acker , Yukiko Tsuji , Thijs Vangeel , Sander Van den Bosch , Jan Van Doorsselaere , Bert Sels , John Ralph , Wout Boerjan

Overexpression of the scopoletin biosynthetic pathway enhances lignocellulosic biomass processing.

Science advances

Avec: Lennart Hoengenaert , Marlies Wouters , Hoon Kim , Barbara De Meester , Kris Morreel , Steven Vandersyppe , Jacob Pollier , Sandrien Desmet , Geert Goeminne , John Ralph , Wout Boerjan ,

Breeding for improved digestibility and processing of lignocellulosic biomass in

Frontiers in plant science

Avec: Yasmine Vanhevel , Astrid De Moor , Hilde Muylle , Wout Boerjan

Réseau de co-auteurs

Wout Boerjan 22 collaborations

John Ralph 15 collaborations

Geert Goeminne 13 collaborations

Barbara De Meester 9 collaborations

Hoon Kim 8 collaborations

Kris Morreel 6 collaborations

Lisanne de Vries 5 collaborations

Jan Van Doorsselaere 5 collaborations

Yukiko Tsuji 4 collaborations

Marlies Wouters 3 collaborations

Lennart Hoengenaert 3 collaborations

Sandrien Desmet 3 collaborations

Jacob Pollier 3 collaborations

Christopher McClellan 2 collaborations

Helena Oakey 2 collaborations

Jennifer Stephens 2 collaborations

Catherine Lapierre 2 collaborations

Claire Halpin 2 collaborations

Marlies Brouckaert 2 collaborations

Yvan Saeys 2 collaborations

Vitaliy I Timokhin 2 collaborations

Shinya Kajita 2 collaborations

Xinyu Liu 2 collaborations

Bartel Vanholme 2 collaborations

Paula Oyarce 2 collaborations

Andreas Pallidis 2 collaborations

Sander Van den Bosch 2 collaborations

Bert Sels 2 collaborations

Rebecca Van Acker 2 collaborations

Hilde Muylle 2 collaborations

Reza Shafiei 1 collaboration

Matthew Hooper 1 collaboration

Héloïse Bastiaanse 1 collaboration

Stephane Rombauts 1 collaboration

Tim De Pooter 1 collaboration

Mojca Strazisar 1 collaboration

Godfrey Neutelings 1 collaboration

Meng Peng 1 collaboration

René Höfer 1 collaboration

Ilias El Houari 1 collaboration

Chiarina Darrah 1 collaboration

Véronique Storme 1 collaboration

Santeri Kankaanpää 1 collaboration

Enni Väisänen 1 collaboration

Rabah Soliymani 1 collaboration

Anatoliy Samoylenko 1 collaboration

Seppo Vainio 1 collaboration

Gunnar Wingsle 1 collaboration

Anna Kärkönen 1 collaboration

Barbara Madariaga Calderón 1 collaboration

Mingjie Chen 1 collaboration

Koichi Yoshioka 1 collaboration

Fachuang Lu 1 collaboration

Nette De Ridder 1 collaboration

Kevin Verstaen 1 collaboration

Rebecca Dauwe 1 collaboration

Claudiu Niculaes 1 collaboration

Atsushi Fukushima 1 collaboration

Paul Daly 1 collaboration

Marta Maluk 1 collaboration

Robbie Waugh 1 collaboration

David Marshall 1 collaboration

Abdellah Barakate 1 collaboration

Lisa Sundin 1 collaboration

Keletso Carol Seetso 1 collaboration

Jin Li 1 collaboration

Jurgen Haustraete 1 collaboration

Huei-Hsuan Tsai 1 collaboration

Wolfgang Schmidt 1 collaboration

Fernando Fonseca 1 collaboration

Riet De Rycke 1 collaboration

Yanding Li 1 collaboration

Thatiane Mota 1 collaboration

Klaas Witvrouw 1 collaboration

Bo Zhang 1 collaboration

Bernadette Sztojka 1 collaboration

Sacha Escamez 1 collaboration

Mattias Hedenström 1 collaboration

Yin Wang 1 collaboration

Halbay Turumtay 1 collaboration

András Gorzsás 1 collaboration

Hannele Tuominen 1 collaboration

Alexandra Chanoca 1 collaboration

Matthew R Regner 1 collaboration

Yi Sun 1 collaboration

Vincent L Chiang 1 collaboration

Jack P Wang 1 collaboration

Wannes Voorend 1 collaboration

Mickael Bosio 1 collaboration

Shi Hu 1 collaboration

Naofumi Kamimura 1 collaboration

Shingo Sakamoto 1 collaboration

Soichiro Nagano 1 collaboration

Naoki Takata 1 collaboration

Sarah Liu 1 collaboration

Mikiko Uesugi 1 collaboration

Masanobu Yamamoto 1 collaboration

Shojiro Hishiyama 1 collaboration

Eiji Masai 1 collaboration

Nobutaka Mitsuda 1 collaboration

Thijs Vangeel 1 collaboration

Steven Vandersyppe 1 collaboration

Yasmine Vanhevel 1 collaboration

Astrid De Moor 1 collaboration