Philippe Hupé

Affiliations

Institut Curie, Paris, F-75005, France.
U900, Inserm, Paris, F-75005, France.
PSL Research University, Paris, France.
Mines Paris Tech, Fontainebleau, F-77305, France.
UMR144, CNRS, Paris, F-75005, France.

ORCID: 0000-0001-8468-3424

Publications (10)

QUARTIC: QUick pArallel algoRithms for high-Throughput sequencIng data proCessing.

F1000Research

Avec: Frédéric Jarlier , Nicolas Joly , Nicolas Fedy , Thomas Magalhaes , Leonor Sirotti , Paul Paganiban , Firmin Martin , Michael McManus ,

Serum and Salivary IgG and IgA Response After COVID-19 Messenger RNA Vaccination.

JAMA network open

Avec: Guy Gorochov , Jacques Ropers , Odile Launay , Karim Dorgham , Omaira da Mata-Jardin , Said Lebbah , Christine Durier , Rebecca Bauer , Anne Radenne , Corinne Desaint , Louis-Victorien Vieillard , Claire Rekacewicz , Marie Lachatre , Béatrice Parfait , Frédéric Batteux , Läétitia Ninove , Maeva Lefebvre , Anne Conrad , Bertrand Dussol , Zoha Maakaroun-Vermesse , Giovanna Melica , Jean-François Nicolas , Renaud Verdon , Jean-Jacques Kiladjian , Paul Loubet , Catherine Schmidt-Mutter , Christian Dualé , Séverine Ansart , Elisabeth Botelho-Nevers , Jean-Daniel Lelièvre , Xavier de Lamballerie , Marie-Paule Kieny , Eric Tartour , Stéphane Paul

ONCOLINER: A new solution for monitoring, improving, and harmonizing somatic variant calling across genomic oncology centers.

Cell genomics

Avec: Rodrigo Martín , Nicolás Gaitán , Frédéric Jarlier , Lars Feuerbach , Henri de Soyres , Marc Arbonés , Tom Gutman , Montserrat Puiggròs , Alvaro Ferriz , Asier Gonzalez , Lucía Estelles , Ivo Gut , Salvador Capella-Gutierrez , Lincoln D Stein , Benedikt Brors , Romina Royo , David Torrents

Microbe-host interplay in atopic dermatitis and psoriasis.

Nature communications

Avec: Nanna Fyhrquist , Gareth Muirhead , Stefanie Prast-Nielsen , Marine Jeanmougin , Peter Olah , Tiina Skoog , Gerome Jules-Clement , Micha Feld , Mauricio Barrientos-Somarribas , Hanna Sinkko , Ellen H van den Bogaard , Patrick L J M Zeeuwen , Gijs Rikken , Joost Schalkwijk , Hanna Niehues , Walter Däubener , Silvia Kathrin Eller , Helen Alexander , Davide Pennino , Sari Suomela , Ioannis Tessas , Emilia Lybeck , Anna M Baran , Hamid Darban , Roopesh Singh Gangwar , Ulrich Gerstel , Katharina Jahn , Piia Karisola , Lee Yan , Britta Hansmann , Shintaro Katayama , Stephan Meller , Max Bylesjö , Francesca Levi-Schaffer , Dario Greco , Annamari Ranki , Jens M Schröder , Jonathan Barker , Juha Kere , Sophia Tsoka , Antti Lauerma , Vassili Soumelis , Frank O Nestle , Bernhard Homey , Björn Andersson , Harri Alenius

F1000Research

Avec: Choumouss Kamoun , Julien Roméjon , Henri de Soyres , Apolline Gallois , Elodie Girard ,

A Quantitative Multivariate Model of Human Dendritic Cell-T Helper Cell Communication.

Cell

Avec: Maximilien Grandclaudon , Marie Perrot-Dockès , Coline Trichot , Léa Karpf , Omar Abouzid , Camille Chauvin , Philémon Sirven , Wassim Abou-Jaoudé , Frédérique Berger , Denis Thieffry , Laure Sansonnet , Julien Chiquet , Céline Lévy-Leduc , Vassili Soumelis

Geniac: Automatic Configuration GENerator and Installer for nextflow pipelines.

Open research Europe

Avec: Fabrice Allain , Julien Roméjon , Philippe La Rosa , Frédéric Jarlier , Nicolas Servant ,

Analytical Platforms 1: Use of Cultured Cells and Fluorescent Read-Out Coupled to NormaCurve Normalization in RPPA.

Advances in experimental medicine and biology

Avec: Bérengère Ouine , Sabine Rajkumar , Leanne de Koning

Influence of FLG loss-of-function mutations in host-microbe interactions during atopic skin inflammation.

Journal of dermatological science

Avec: Peter Oláh , Eszter Szlávicz , Marcus Kuchner , Jana Nemmer , Patrick Zeeuwen , Alain Lefèvre-Utile , Nanna Fyhrquist , Stefanie Prast-Nielsen , Tiina Skoog , Angela Serra , Elke Rodríguez , Ulrike Raap , Stephan Meller , Rolland Gyulai , Juha Kere , Francesca Levi-Schaffer , Sophia Tsoka , Helen Alexander , Frank O Nestle , Jens M Schröder , Stephan Weidinger , Ellen van den Bogaard , Vassili Soumelis , Dario Greco , Jonathan Barker , Antti Lauerma , Annamari Ranki , Björn Andersson , Harri Alenius , Bernhard Homey

Patient Derived Xenografts (PDX) Models as an Avatar to Assess Personalized Therapy Options in Uveal Melanoma: A Feasibility Study.

Current oncology (Toronto, Ont.)

Avec: Fariba Nemati , Leanne de Koning , David Gentien , Franck Assayag , Emilie Henry , Khadija Ait Rais , Gaelle Pierron , Odette Mariani , Michèle Nijnikoff , Gabriel Champenois , André Nicolas , Didier Meseure , Sophie Gardrat , Nicolas Servant , Maud Kamal , Christophe Le Tourneau , Sophie Piperno-Neumann , Manuel Rodrigues , Sergio Roman-Roman , Didier Decaudin , Pascale Mariani , Nathalie Cassoux

Réseau de co-auteurs

Frédéric Jarlier 3 collaborations

Vassili Soumelis 3 collaborations

Henri de Soyres 2 collaborations

Nanna Fyhrquist 2 collaborations

Stefanie Prast-Nielsen 2 collaborations

Tiina Skoog 2 collaborations

Helen Alexander 2 collaborations

Stephan Meller 2 collaborations

Francesca Levi-Schaffer 2 collaborations

Dario Greco 2 collaborations

Annamari Ranki 2 collaborations

Jens M Schröder 2 collaborations

Jonathan Barker 2 collaborations

Juha Kere 2 collaborations

Sophia Tsoka 2 collaborations

Antti Lauerma 2 collaborations

Frank O Nestle 2 collaborations

Bernhard Homey 2 collaborations

Björn Andersson 2 collaborations

Harri Alenius 2 collaborations

Julien Roméjon 2 collaborations

Nicolas Servant 2 collaborations

Leanne de Koning 2 collaborations

Nicolas Joly 1 collaboration

Nicolas Fedy 1 collaboration

Thomas Magalhaes 1 collaboration

Leonor Sirotti 1 collaboration

Paul Paganiban 1 collaboration

Firmin Martin 1 collaboration

Michael McManus 1 collaboration

Guy Gorochov 1 collaboration

Jacques Ropers 1 collaboration

Odile Launay 1 collaboration

Karim Dorgham 1 collaboration

Omaira da Mata-Jardin 1 collaboration

Said Lebbah 1 collaboration

Christine Durier 1 collaboration

Rebecca Bauer 1 collaboration

Anne Radenne 1 collaboration

Corinne Desaint 1 collaboration

Louis-Victorien Vieillard 1 collaboration

Claire Rekacewicz 1 collaboration

Marie Lachatre 1 collaboration

Béatrice Parfait 1 collaboration

Frédéric Batteux 1 collaboration

Läétitia Ninove 1 collaboration

Maeva Lefebvre 1 collaboration

Anne Conrad 1 collaboration

Bertrand Dussol 1 collaboration

Zoha Maakaroun-Vermesse 1 collaboration

Giovanna Melica 1 collaboration

Jean-François Nicolas 1 collaboration

Renaud Verdon 1 collaboration

Jean-Jacques Kiladjian 1 collaboration

Paul Loubet 1 collaboration

Catherine Schmidt-Mutter 1 collaboration

Christian Dualé 1 collaboration

Séverine Ansart 1 collaboration

Elisabeth Botelho-Nevers 1 collaboration

Jean-Daniel Lelièvre 1 collaboration

Xavier de Lamballerie 1 collaboration

Marie-Paule Kieny 1 collaboration

Eric Tartour 1 collaboration

Stéphane Paul 1 collaboration

Rodrigo Martín 1 collaboration

Nicolás Gaitán 1 collaboration

Lars Feuerbach 1 collaboration

Marc Arbonés 1 collaboration

Tom Gutman 1 collaboration

Montserrat Puiggròs 1 collaboration

Alvaro Ferriz 1 collaboration

Asier Gonzalez 1 collaboration

Lucía Estelles 1 collaboration

Ivo Gut 1 collaboration

Salvador Capella-Gutierrez 1 collaboration

Lincoln D Stein 1 collaboration

Benedikt Brors 1 collaboration

Romina Royo 1 collaboration

David Torrents 1 collaboration

Gareth Muirhead 1 collaboration

Marine Jeanmougin 1 collaboration

Peter Olah 1 collaboration

Gerome Jules-Clement 1 collaboration

Micha Feld 1 collaboration

Mauricio Barrientos-Somarribas 1 collaboration

Hanna Sinkko 1 collaboration

Ellen H van den Bogaard 1 collaboration

Patrick L J M Zeeuwen 1 collaboration

Gijs Rikken 1 collaboration

Joost Schalkwijk 1 collaboration

Hanna Niehues 1 collaboration

Walter Däubener 1 collaboration

Silvia Kathrin Eller 1 collaboration

Davide Pennino 1 collaboration

Sari Suomela 1 collaboration

Ioannis Tessas 1 collaboration

Emilia Lybeck 1 collaboration

Anna M Baran 1 collaboration

Hamid Darban 1 collaboration

Roopesh Singh Gangwar 1 collaboration

Ulrich Gerstel 1 collaboration

Katharina Jahn 1 collaboration

Piia Karisola 1 collaboration

Lee Yan 1 collaboration

Britta Hansmann 1 collaboration

Shintaro Katayama 1 collaboration

Max Bylesjö 1 collaboration

Choumouss Kamoun 1 collaboration

Apolline Gallois 1 collaboration

Elodie Girard 1 collaboration

Maximilien Grandclaudon 1 collaboration

Marie Perrot-Dockès 1 collaboration

Coline Trichot 1 collaboration

Léa Karpf 1 collaboration

Omar Abouzid 1 collaboration

Camille Chauvin 1 collaboration

Philémon Sirven 1 collaboration

Wassim Abou-Jaoudé 1 collaboration

Frédérique Berger 1 collaboration

Denis Thieffry 1 collaboration

Laure Sansonnet 1 collaboration

Julien Chiquet 1 collaboration

Céline Lévy-Leduc 1 collaboration

Fabrice Allain 1 collaboration

Philippe La Rosa 1 collaboration

Bérengère Ouine 1 collaboration

Sabine Rajkumar 1 collaboration

Peter Oláh 1 collaboration

Eszter Szlávicz 1 collaboration

Marcus Kuchner 1 collaboration

Jana Nemmer 1 collaboration

Patrick Zeeuwen 1 collaboration

Alain Lefèvre-Utile 1 collaboration

Angela Serra 1 collaboration

Elke Rodríguez 1 collaboration

Ulrike Raap 1 collaboration

Rolland Gyulai 1 collaboration

Stephan Weidinger 1 collaboration

Ellen van den Bogaard 1 collaboration

Fariba Nemati 1 collaboration

David Gentien 1 collaboration

Franck Assayag 1 collaboration

Emilie Henry 1 collaboration

Khadija Ait Rais 1 collaboration

Gaelle Pierron 1 collaboration

Odette Mariani 1 collaboration

Michèle Nijnikoff 1 collaboration

Gabriel Champenois 1 collaboration

André Nicolas 1 collaboration

Didier Meseure 1 collaboration

Sophie Gardrat 1 collaboration

Maud Kamal 1 collaboration

Christophe Le Tourneau 1 collaboration

Sophie Piperno-Neumann 1 collaboration

Manuel Rodrigues 1 collaboration

Sergio Roman-Roman 1 collaboration

Didier Decaudin 1 collaboration

Pascale Mariani 1 collaboration

Nathalie Cassoux 1 collaboration