Mikkel Heide Schierup

Affiliations
  • Bioinformatics Research Centre, Aarhus University, 8000, Aarhus C, Denmark. mheide@birc.au.dk.
ORCID: http://orcid.org/0000-0002-5028-1790

Publications (43)

Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan.

Nature communications
Avec: Niraj Shah , Tomomi Wakabayashi , Yasuko Kawamura , Cathrine Kiel Skovbjerg , Ming-Zhuo Wang , Yusdar Mustamin , Yoshiko Isomura , Vikas Gupta , Haojie Jin , Terry Mun , Niels Sandal , Fuyuki Azuma , Eigo Fukai , Ümit Seren , Shohei Kusakabe , Yuki Kikuchi , Shogo Nitanda , Takashi Kumaki , Masatsugu Hashiguchi , Hidenori Tanaka , Atsushi Hayashi , Mads Sønderkær , Kaare Lehmann Nielsen , Korbinian Schneeberger , Bjarni Vilhjalmsson , Ryo Akashi , Jens Stougaard , Shusei Sato , Stig Uggerhøj Andersen

Studying mutation rate evolution in primates-a need for systematic comparison of computational pipelines.

GigaScience
Avec: Lucie A Bergeron , Søren Besenbacher , Mikkel H Schierup , Guojie Zhang

Small RNAs in Seminal Plasma as Novel Biomarkers for Germ Cell Tumors.

Cancers
Avec: Nina Mørup , Rytis Stakaitis , Ieva Golubickaite , Meritxell Riera , Marlene Danner Dalgaard , Mikkel H Schierup , Niels Jørgensen , Gedske Daugaard , Anders Juul , Kristian Almstrup

The Mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates.

eLife
Avec: Lucie A Bergeron , Søren Besenbacher , Tychele Turner , Cyril J Versoza , Richard J Wang , Alivia Lee Price , Ellie Armstrong , Meritxell Riera , Jedidiah Carlson , Hwei-Yen Chen , Matthew W Hahn , Kelley Harris , April Snøfrid Kleppe , Elora H López-Nandam , Priya Moorjani , Susanne P Pfeifer , George P Tiley , Anne D Yoder , Guojie Zhang , Mikkel H Schierup

The landscape of tolerated genetic variation in humans and primates.

Science (New York, N.Y.)
Avec: Hong Gao , Tobias Hamp , Jeffrey Ede , Joshua G Schraiber , Jeremy McRae , Moriel Singer-Berk , Yanshen Yang , Anastasia S D Dietrich , Petko P Fiziev , Lukas F K Kuderna , Laksshman Sundaram , Yibing Wu , Aashish Adhikari , Yair Field , Chen Chen , Serafim Batzoglou , Francois Aguet , Gabrielle Lemire , Rebecca Reimers , Daniel Balick , Mareike C Janiak , Martin Kuhlwilm , Joseph D Orkin , Shivakumara Manu , Alejandro Valenzuela , Juraj Bergman , Marjolaine Rousselle , Felipe Ennes Silva , Lidia Agueda , Julie Blanc , Marta Gut , Dorien de Vries , Ian Goodhead , R Alan Harris , Muthuswamy Raveendran , Axel Jensen , Idriss S Chuma , Julie E Horvath , Christina Hvilsom , David Juan , Peter Frandsen , Fabiano R de Melo , Fabrício Bertuol , Hazel Byrne , Iracilda Sampaio , Izeni Farias , João Valsecchi do Amaral , Mariluce Messias , Maria N F da Silva , Mihir Trivedi , Rogerio Rossi , Tomas Hrbek , Nicole Andriaholinirina , Clément J Rabarivola , Alphonse Zaramody , Clifford J Jolly , Jane Phillips-Conroy , Gregory Wilkerson , Christian Abee , Joe H Simmons , Eduardo Fernandez-Duque , Sree Kanthaswamy , Fekadu Shiferaw , Dongdong Wu , Long Zhou , Yong Shao , Guojie Zhang , Julius D Keyyu , Sascha Knauf , Minh D Le , Esther Lizano , Stefan Merker , Arcadi Navarro , Thomas Bataillon , Tilo Nadler , Chiea Chuen Khor , Jessica Lee , Patrick Tan , Weng Khong Lim , Andrew C Kitchener , Dietmar Zinner , Ivo Gut , Amanda Melin , Katerina Guschanski , Robin M D Beck , Govindhaswamy Umapathy , Christian Roos , Jean P Boubli , Monkol Lek , Shamil Sunyaev , Anne O'Donnell-Luria , Heidi L Rehm , Jinbo Xu , Jeffrey Rogers , Tomas Marques-Bonet , Kyle Kai-How Farh

A global catalog of whole-genome diversity from 233 primate species.

Science (New York, N.Y.)
Avec: Lukas F K Kuderna , Hong Gao , Mareike C Janiak , Martin Kuhlwilm , Joseph D Orkin , Thomas Bataillon , Shivakumara Manu , Alejandro Valenzuela , Juraj Bergman , Marjolaine Rousselle , Felipe Ennes Silva , Lidia Agueda , Julie Blanc , Marta Gut , Dorien de Vries , Ian Goodhead , R Alan Harris , Muthuswamy Raveendran , Axel Jensen , Idrissa S Chuma , Julie E Horvath , Christina Hvilsom , David Juan , Peter Frandsen , Joshua G Schraiber , Fabiano R de Melo , Fabrício Bertuol , Hazel Byrne , Iracilda Sampaio , Izeni Farias , João Valsecchi , Malu Messias , Maria N F da Silva , Mihir Trivedi , Rogerio Rossi , Tomas Hrbek , Nicole Andriaholinirina , Clément J Rabarivola , Alphonse Zaramody , Clifford J Jolly , Jane Phillips-Conroy , Gregory Wilkerson , Christian Abee , Joe H Simmons , Eduardo Fernandez-Duque , Sree Kanthaswamy , Fekadu Shiferaw , Dongdong Wu , Long Zhou , Yong Shao , Guojie Zhang , Julius D Keyyu , Sascha Knauf , Minh D Le , Esther Lizano , Stefan Merker , Arcadi Navarro , Tilo Nadler , Chiea Chuen Khor , Jessica Lee , Patrick Tan , Weng Khong Lim , Andrew C Kitchener , Dietmar Zinner , Ivo Gut , Amanda D Melin , Katerina Guschanski , Robin M D Beck , Govindhaswamy Umapathy , Christian Roos , Jean P Boubli , Jeffrey Rogers , Kyle Kai-How Farh , Tomas Marques Bonet

Evaluating genetic causes of azoospermia: What can we learn from a complex cellular structure and single-cell transcriptomics of the human testis?

Human genetics
Avec: Samuele Soraggi , Meritxell Riera , Ewa Rajpert-De Meyts , Mikkel H Schierup , Kristian Almstrup

Author Correction: Direct estimation of mutations in great apes reconciles phylogenetic dating.

Nature ecology & evolution
Avec: Søren Besenbacher , Christina Hvilsom , Tomas Marques-Bonet , Thomas Mailund ,

The germline mutational process in rhesus macaque and its implications for phylogenetic dating.

GigaScience
Avec: Lucie A Bergeron , Søren Besenbacher , Jaco Bakker , Jiao Zheng , Panyi Li , George Pacheco , Mikkel-Holger S Sinding , Maria Kamilari , M Thomas P Gilbert , Mikkel H Schierup , Guojie Zhang

Evolutionary dynamics of pseudoautosomal region 1 in humans and great apes.

Genome biology
Avec: Juraj Bergman ,

Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons.

Science (New York, N.Y.)
Avec: Erik F Sørensen , R Alan Harris , Liye Zhang , Muthuswamy Raveendran , Lukas F K Kuderna , Jerilyn A Walker , Jessica M Storer , Martin Kuhlwilm , Claudia Fontsere , Lakshmi Seshadri , Christina M Bergey , Andrew S Burrell , Juraj Bergman , Jane E Phillips-Conroy , Fekadu Shiferaw , Kenneth L Chiou , Idrissa S Chuma , Julius D Keyyu , Julia Fischer , Marie-Claude Gingras , Sejal Salvi , Harshavardhan Doddapaneni , Mikkel H Schierup , Mark A Batzer , Clifford J Jolly , Sascha Knauf , Dietmar Zinner , Kyle K-H Farh , Tomas Marques-Bonet , Kasper Munch , Christian Roos , Jeffrey Rogers

Eighty million years of rapid evolution of the primate Y chromosome.

Nature ecology & evolution
Avec: Yang Zhou , Xiaoyu Zhan , Jiazheng Jin , Long Zhou , Juraj Bergman , Xuemei Li , Marjolaine Marie C Rousselle , Meritxell Riera Belles , Lan Zhao , Miaoquan Fang , Jiawei Chen , Qi Fang , Lukas Kuderna , Tomas Marques-Bonet , Haruka Kitayama , Takashi Hayakawa , Yong-Gang Yao , Huanming Yang , David N Cooper , Xiaoguang Qi , Dong-Dong Wu , Guojie Zhang

Direct estimation of mutations in great apes reconciles phylogenetic dating.

Nature ecology & evolution
Avec: Søren Besenbacher , Christina Hvilsom , Tomas Marques-Bonet , Thomas Mailund ,

Association Mapping and Disease: Evolutionary Perspectives.

Methods in molecular biology (Clifton, N.J.)
Avec: Søren Besenbacher , Thomas Mailund , Bjarni J Vilhjálmsson , Mikkel H Schierup

Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover.

The Plant cell
Avec: Andrew G Griffiths , Roger Moraga , Marni Tausen , Vikas Gupta , Timothy P Bilton , Matthew A Campbell , Rachael Ashby , Istvan Nagy , Anar Khan , Anna Larking , Craig Anderson , Benjamin Franzmayr , Kerry Hancock , Alicia Scott , Nick W Ellison , Murray P Cox , Torben Asp , Thomas Mailund , Mikkel H Schierup , Stig Uggerhøj Andersen

Different historical generation intervals in human populations inferred from Neanderthal fragment lengths and mutation signatures.

Nature communications
Avec: Moisès Coll Macià , Laurits Skov , Benjamin Marco Peter ,

Proceedings of the National Academy of Sciences of the United States of America
Avec: Maria Izabel A Cavassim , Zachary Baker , Carla Hoge , Mikkel H Schierup , Molly Schumer , Molly Przeworski

Incomplete lineage sorting and phenotypic evolution in marsupials.

Cell
Avec: Shaohong Feng , Ming Bai , Iker Rivas-González , Cai Li , Shiping Liu , Yijie Tong , Haidong Yang , Guangji Chen , Duo Xie , Karen E Sears , Lida M Franco , Juan Diego Gaitan-Espitia , Roberto F Nespolo , Warren E Johnson , Huanming Yang , Parice A Brandies , Carolyn J Hogg , Katherine Belov , Marilyn B Renfree , Kristofer M Helgen , Jacobus J Boomsma , Guojie Zhang

TRAILS: Tree reconstruction of ancestry using incomplete lineage sorting.

PLoS genetics
Avec: Iker Rivas-González , Mikkel H Schierup , John Wakeley , Asger Hobolth

Identification of constrained sequence elements across 239 primate genomes.

Nature
Avec: Lukas F K Kuderna , Jacob C Ulirsch , Sabrina Rashid , Mohamed Ameen , Laksshman Sundaram , Glenn Hickey , Anthony J Cox , Hong Gao , Arvind Kumar , Francois Aguet , Matthew J Christmas , Hiram Clawson , Maximilian Haeussler , Mareike C Janiak , Martin Kuhlwilm , Joseph D Orkin , Thomas Bataillon , Shivakumara Manu , Alejandro Valenzuela , Juraj Bergman , Marjolaine Rouselle , Felipe Ennes Silva , Lidia Agueda , Julie Blanc , Marta Gut , Dorien de Vries , Ian Goodhead , R Alan Harris , Muthuswamy Raveendran , Axel Jensen , Idriss S Chuma , Julie E Horvath , Christina Hvilsom , David Juan , Peter Frandsen , Joshua G Schraiber , Fabiano R de Melo , Fabrício Bertuol , Hazel Byrne , Iracilda Sampaio , Izeni Farias , João Valsecchi , Malu Messias , Maria N F da Silva , Mihir Trivedi , Rogerio Rossi , Tomas Hrbek , Nicole Andriaholinirina , Clément J Rabarivola , Alphonse Zaramody , Clifford J Jolly , Jane Phillips-Conroy , Gregory Wilkerson , Christian Abee , Joe H Simmons , Eduardo Fernandez-Duque , Sree Kanthaswamy , Fekadu Shiferaw , Dongdong Wu , Long Zhou , Yong Shao , Guojie Zhang , Julius D Keyyu , Sascha Knauf , Minh D Le , Esther Lizano , Stefan Merker , Arcadi Navarro , Tilo Nadler , Chiea Chuen Khor , Jessica Lee , Patrick Tan , Weng Khong Lim , Andrew C Kitchener , Dietmar Zinner , Ivo Gut , Amanda D Melin , Katerina Guschanski , Robin M D Beck , Ioannis Karakikes , Kevin C Wang , Govindhaswamy Umapathy , Christian Roos , Jean P Boubli , Adam Siepel , Anshul Kundaje , Benedict Paten , Kerstin Lindblad-Toh , Jeffrey Rogers , Tomas Marques Bonet , Kyle Kai-How Farh

Evidence for Faster X Chromosome Evolution in Spiders.

Molecular biology and evolution
Avec: Jesper Bechsgaard , Mads Fristrup Schou , Bram Vanthournout , Frederik Hendrickx , Bjarne Knudsen , Virginia Settepani , Trine Bilde

The comparative genomics and complex population history of

Science advances
Avec: Jeffrey Rogers , Muthuswamy Raveendran , R Alan Harris , Thomas Mailund , Kalle Leppälä , Georgios Athanasiadis , Jade Cheng , Kasper Munch , Jerilyn A Walker , Miriam K Konkel , Vallmer Jordan , Cody J Steely , Thomas O Beckstrom , Christina Bergey , Andrew Burrell , Dominik Schrempf , Angela Noll , Maximillian Kothe , Gisela H Kopp , Yue Liu , Shwetha Murali , Konstantinos Billis , Fergal J Martin , Matthieu Muffato , Laura Cox , James Else , Todd Disotell , Donna M Muzny , Jane Phillips-Conroy , Bronwen Aken , Evan E Eichler , Tomas Marques-Bonet , Carolin Kosiol , Mark A Batzer , Matthew W Hahn , Jenny Tung , Dietmar Zinner , Christian Roos , Clifford J Jolly , Richard A Gibbs , Kim C Worley , Auteur inconnu

The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes.

Nature
Avec: Laurits Skov , Moisès Coll Macià , Garðar Sveinbjörnsson , Fabrizio Mafessoni , Elise A Lucotte , Margret S Einarsdóttir , Hakon Jonsson , Bjarni Halldorsson , Daniel F Gudbjartsson , Agnar Helgason , Kari Stefansson

Integration and reanalysis of transcriptomics and methylomics data derived from blood and testis tissue of men with 47,XXY Klinefelter syndrome indicates the primary involvement of Sertoli cells in the testicular pathogenesis.

American journal of medical genetics. Part C, Seminars in medical genetics
Avec: Sofia B Winge , Samuele Soraggi , Mikkel H Schierup , Ewa Rajpert-De Meyts , Kristian Almstrup

Evolutionary and biomedical insights from a marmoset diploid genome assembly.

Nature
Avec: Chentao Yang , Yang Zhou , Stephanie Marcus , Giulio Formenti , Lucie A Bergeron , Zhenzhen Song , Xupeng Bi , Juraj Bergman , Marjolaine Marie C Rousselle , Chengran Zhou , Long Zhou , Yuan Deng , Miaoquan Fang , Duo Xie , Yuanzhen Zhu , Shangjin Tan , Jacquelyn Mountcastle , Bettina Haase , Jennifer Balacco , Jonathan Wood , William Chow , Arang Rhie , Martin Pippel , Margaret M Fabiszak , Sergey Koren , Olivier Fedrigo , Winrich A Freiwald , Kerstin Howe , Huanming Yang , Adam M Phillippy , Erich D Jarvis , Guojie Zhang

Complexity of avian evolution revealed by family-level genomes.

Nature
Avec: Josefin Stiller , Shaohong Feng , Al-Aabid Chowdhury , Iker Rivas-González , David A Duchêne , Qi Fang , Yuan Deng , Alexey Kozlov , Alexandros Stamatakis , Santiago Claramunt , Jacqueline M T Nguyen , Simon Y W Ho , Brant C Faircloth , Julia Haag , Peter Houde , Joel Cracraft , Metin Balaban , Uyen Mai , Guangji Chen , Rongsheng Gao , Chengran Zhou , Yulong Xie , Zijian Huang , Zhen Cao , Zhi Yan , Huw A Ogilvie , Luay Nakhleh , Bent Lindow , Benoit Morel , Jon Fjeldså , Peter A Hosner , Rute R da Fonseca , Bent Petersen , Joseph A Tobias , Tamás Székely , Jonathan David Kennedy , Andrew Hart Reeve , Andras Liker , Martin Stervander , Agostinho Antunes , Dieter Thomas Tietze , Mads Bertelsen , Fumin Lei , Carsten Rahbek , Gary R Graves , Mikkel H Schierup , Tandy Warnow , Edward L Braun , M Thomas P Gilbert , Erich D Jarvis , Siavash Mirarab , Guojie Zhang

A region of suppressed recombination misleads neoavian phylogenomics.

Proceedings of the National Academy of Sciences of the United States of America
Avec: Siavash Mirarab , Iker Rivas-González , Shaohong Feng , Josefin Stiller , Qi Fang , Uyen Mai , Glenn Hickey , Guangji Chen , Nadolina Brajuka , Olivier Fedrigo , Giulio Formenti , Jochen B W Wolf , Kerstin Howe , Agostinho Antunes , Mikkel H Schierup , Benedict Paten , Erich D Jarvis , Guojie Zhang , Edward L Braun

Phylogenomic analyses provide insights into primate evolution.

Science (New York, N.Y.)
Avec: Yong Shao , Long Zhou , Fang Li , Lan Zhao , Bao-Lin Zhang , Feng Shao , Jia-Wei Chen , Chun-Yan Chen , Xupeng Bi , Xiao-Lin Zhuang , Hong-Liang Zhu , Jiang Hu , Zongyi Sun , Xin Li , Depeng Wang , Iker Rivas-González , Sheng Wang , Yun-Mei Wang , Wu Chen , Gang Li , Hui-Meng Lu , Yang Liu , Lukas F K Kuderna , Kyle Kai-How Farh , Peng-Fei Fan , Li Yu , Ming Li , Zhi-Jin Liu , George P Tiley , Anne D Yoder , Christian Roos , Takashi Hayakawa , Tomas Marques-Bonet , Jeffrey Rogers , Peter D Stenson , David N Cooper , Yong-Gang Yao , Ya-Ping Zhang , Wen Wang , Xiao-Guang Qi , Guojie Zhang , Dong-Dong Wu

Single-cell analysis identifies genes facilitating rhizobium infection in Lotus japonicus.

Nature communications
Avec: Manuel Frank , Lavinia Ioana Fechete , Francesca Tedeschi , Marcin Nadzieja , Malita Malou Malekzadeh Nørgaard , Jesus Montiel , Kasper Røjkjær Andersen , Mikkel H Schierup , Dugald Reid , Stig Uggerhøj Andersen

Harnessing cold adaptation for postglacial colonisation: Galactinol synthase expression and raffinose accumulation in a polyploid and its progenitors.

Plant, cell & environment
Avec: Lavinia Ioana Fechete , Anna C Larking , Angus Heslop , Rina Hannaford , Craig B Anderson , Won Hong , Sushma Prakash , Wade Mace , Salome Alikhani , Rainer W Hofmann , Marni Tausen , Stig Uggerhøj Andersen , Andrew G Griffiths

Symbiosis genes show a unique pattern of introgression and selection within a

Microbial genomics
Avec: Maria Izabel A Cavassim , Sara Moeskjær , Camous Moslemi , Bryden Fields , Asger Bachmann , Bjarni J Vilhjálmsson , J Peter W Young , Stig U Andersen

Selective single molecule sequencing and assembly of a human Y chromosome of African origin.

Nature communications
Avec: Lukas F K Kuderna , Esther Lizano , Eva Julià , Jessica Gomez-Garrido , Aitor Serres-Armero , Martin Kuhlwilm , Regina Antoni Alandes , Marina Alvarez-Estape , David Juan , Heath Simon , Tyler Alioto , Marta Gut , Ivo Gut , Oscar Fornas , Tomas Marques-Bonet

Recombination Facilitates Adaptive Evolution in Rhizobial Soil Bacteria.

Molecular biology and evolution
Avec: Maria Izabel A Cavassim , Stig U Andersen , Thomas Bataillon ,

Pervasive incomplete lineage sorting illuminates speciation and selection in primates.

Science (New York, N.Y.)
Avec: Iker Rivas-González , Marjolaine Rousselle , Fang Li , Long Zhou , Julien Y Dutheil , Kasper Munch , Yong Shao , Dongdong Wu , Mikkel H Schierup , Guojie Zhang

Comparative genomics reveals the hybrid origin of a macaque group.

Science advances
Avec: Bao-Lin Zhang , Wu Chen , Zefu Wang , Wei Pang , Meng-Ting Luo , Sheng Wang , Yong Shao , Wen-Qiang He , Yuan Deng , Long Zhou , Jiawei Chen , Min-Min Yang , Yajiang Wu , Lu Wang , Hugo Fernández-Bellon , Sandra Molloy , Hélène Meunier , Fanélie Wanert , Lukas Kuderna , Tomas Marques-Bonet , Christian Roos , Xiao-Guang Qi , Ming Li , Zhijin Liu , David N Cooper , Jianquan Liu , Yong-Tang Zheng , Guojie Zhang , Dong-Dong Wu

Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions.

Nature communications
Avec: Elise A Lucotte , Valdís Björt Guðmundsdóttir , Jacob M Jensen , Laurits Skov , Moisès Coll Macià , Kristian Almstrup , Mikkel H Schierup , Agnar Helgason , Kari Stefansson

De Novo Mutation Rates in Sticklebacks.

Molecular biology and evolution
Avec: Chaowei Zhang , Kerry Reid , Arthur F Sands , Antoine Fraimout , Juha Merilä

Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons.

bioRxiv : the preprint server for biology
Avec: Erik F Sørensen , R Alan Harris , Liye Zhang , Muthuswamy Raveendran , Lukas F K Kuderna , Jerilyn A Walker , Jessica M Storer , Martin Kuhlwilm , Claudia Fontsere , Lakshmi Seshadri , Christina M Bergey , Andrew S Burrell , Juraj Bergmann , Jane E Phillips-Conroy , Fekadu Shiferaw , Kenneth L Chiou , Idrissa S Chuma , Julius D Keyyu , Julia Fischer , Marie-Claude Gingras , Sejal Salvi , Harshavardhan Doddapaneni , Mikkel H Schierup , Mark A Batzer , Clifford J Jolly , Sascha Knauf , Dietmar Zinner , Kyle K-H Farh , Tomas Marques-Bonet , Kasper Munch , Christian Roos , Jeffrey Rogers

The landscape of tolerated genetic variation in humans and primates.

bioRxiv : the preprint server for biology
Avec: Hong Gao , Tobias Hamp , Jeffrey Ede , Joshua G Schraiber , Jeremy McRae , Moriel Singer-Berk , Yanshen Yang , Anastasia Dietrich , Petko Fiziev , Lukas Kuderna , Laksshman Sundaram , Yibing Wu , Aashish Adhikari , Yair Field , Chen Chen , Serafim Batzoglou , Francois Aguet , Gabrielle Lemire , Rebecca Reimers , Daniel Balick , Mareike C Janiak , Martin Kuhlwilm , Joseph D Orkin , Shivakumara Manu , Alejandro Valenzuela , Juraj Bergman , Marjolaine Rouselle , Felipe Ennes Silva , Lidia Agueda , Julie Blanc , Marta Gut , Dorien de Vries , Ian Goodhead , R Alan Harris , Muthuswamy Raveendran , Axel Jensen , Idriss S Chuma , Julie Horvath , Christina Hvilsom , David Juan , Peter Frandsen , Fabiano R de Melo , Fabricio Bertuol , Hazel Byrne , Iracilda Sampaio , Izeni Farias , João Valsecchi do Amaral , Mariluce Messias , Maria N F da Silva , Mihir Trivedi , Rogerio Rossi , Tomas Hrbek , Nicole Andriaholinirina , Clément J Rabarivola , Alphonse Zaramody , Clifford J Jolly , Jane Phillips-Conroy , Gregory Wilkerson , Christian Abee , Joe H Simmons , Eduardo Fernandez-Duque , Sree Kanthaswamy , Fekadu Shiferaw , Dongdong Wu , Long Zhou , Yong Shao , Guojie Zhang , Julius D Keyyu , Sascha Knauf , Minh D Le , Esther Lizano , Stefan Merker , Arcadi Navarro , Thomas Batallion , Tilo Nadler , Chiea Chuen Khor , Jessica Lee , Patrick Tan , Weng Khong Lim , Andrew C Kitchener , Dietmar Zinner , Ivo Gut , Amanda Melin , Katerina Guschanski , Robin M D Beck , Govindhaswamy Umapathy , Christian Roos , Jean P Boubli , Monkol Lek , Shamil Sunyaev , Anne O'Donnell , Heidi Rehm , Jinbo Xu , Jeffrey Rogers , Tomas Marques-Bonet , Kyle Kai-How Farh

Worldwide Late Pleistocene and Early Holocene population declines in extant megafauna are associated with Homo sapiens expansion rather than climate change.

Nature communications
Avec: Juraj Bergman , Rasmus Ø Pedersen , Erick J Lundgren , Rhys T Lemoine , Sophie Monsarrat , Elena A Pearce , Mikkel H Schierup , Jens-Christian Svenning

Extraordinary selection on the human X chromosome associated with archaic admixture.

Cell genomics
Avec: Laurits Skov , Moisès Coll Macià , Elise Anne Lucotte , Maria Izabel Alvez Cavassim , David Castellano , Kasper Munch

The molecular evolution of spermatogenesis across mammals.

Nature
Avec: Florent Murat , Noe Mbengue , Sofia Boeg Winge , Timo Trefzer , Evgeny Leushkin , Mari Sepp , Margarida Cardoso-Moreira , Julia Schmidt , Celine Schneider , Katharina Mößinger , Thoomke Brüning , Francesco Lamanna , Meritxell Riera Belles , Christian Conrad , Ivanela Kondova , Ronald Bontrop , Rüdiger Behr , Philipp Khaitovich , Svante Pääbo , Tomas Marques-Bonet , Frank Grützner , Kristian Almstrup , Henrik Kaessmann

Evolution of the germline mutation rate across vertebrates.

Nature
Avec: Lucie A Bergeron , Søren Besenbacher , Jiao Zheng , Panyi Li , Mads Frost Bertelsen , Benoit Quintard , Joseph I Hoffman , Zhipeng Li , Judy St Leger , Changwei Shao , Josefin Stiller , M Thomas P Gilbert , Mikkel H Schierup , Guojie Zhang

Réseau de co-auteurs

Mikkel H Schierup 19 collaborations
Guojie Zhang 16 collaborations
Tomas Marques-Bonet 12 collaborations
Juraj Bergman 9 collaborations
Long Zhou 9 collaborations
Christian Roos 9 collaborations
Jeffrey Rogers 8 collaborations
Søren Besenbacher 7 collaborations
Lukas F K Kuderna 7 collaborations
Martin Kuhlwilm 7 collaborations
R Alan Harris 7 collaborations
Muthuswamy Raveendran 7 collaborations
Clifford J Jolly 7 collaborations
Yong Shao 7 collaborations
Dietmar Zinner 7 collaborations
Christina Hvilsom 6 collaborations
Fekadu Shiferaw 6 collaborations
Julius D Keyyu 6 collaborations
Sascha Knauf 6 collaborations
Iker Rivas-González 6 collaborations
Lucie A Bergeron 5 collaborations
Kristian Almstrup 5 collaborations
Marta Gut 5 collaborations
David Juan 5 collaborations
Jane Phillips-Conroy 5 collaborations
Dongdong Wu 5 collaborations
Esther Lizano 5 collaborations
Ivo Gut 5 collaborations
Kyle Kai-How Farh 5 collaborations
Thomas Mailund 5 collaborations
Kasper Munch 5 collaborations
Stig Uggerhøj Andersen 4 collaborations
Hong Gao 4 collaborations
Joshua G Schraiber 4 collaborations
Mareike C Janiak 4 collaborations
Joseph D Orkin 4 collaborations
Shivakumara Manu 4 collaborations
Alejandro Valenzuela 4 collaborations
Felipe Ennes Silva 4 collaborations
Lidia Agueda 4 collaborations
Julie Blanc 4 collaborations
Dorien de Vries 4 collaborations
Ian Goodhead 4 collaborations
Axel Jensen 4 collaborations
Peter Frandsen 4 collaborations
Fabiano R de Melo 4 collaborations
Hazel Byrne 4 collaborations
Iracilda Sampaio 4 collaborations
Izeni Farias 4 collaborations
Maria N F da Silva 4 collaborations
Mihir Trivedi 4 collaborations
Rogerio Rossi 4 collaborations
Tomas Hrbek 4 collaborations
Nicole Andriaholinirina 4 collaborations
Clément J Rabarivola 4 collaborations
Alphonse Zaramody 4 collaborations
Gregory Wilkerson 4 collaborations
Christian Abee 4 collaborations
Joe H Simmons 4 collaborations
Eduardo Fernandez-Duque 4 collaborations
Sree Kanthaswamy 4 collaborations
Minh D Le 4 collaborations
Stefan Merker 4 collaborations
Arcadi Navarro 4 collaborations
Thomas Bataillon 4 collaborations
Tilo Nadler 4 collaborations
Chiea Chuen Khor 4 collaborations
Jessica Lee 4 collaborations
Patrick Tan 4 collaborations
Weng Khong Lim 4 collaborations
Andrew C Kitchener 4 collaborations
Katerina Guschanski 4 collaborations
Robin M D Beck 4 collaborations
Govindhaswamy Umapathy 4 collaborations
Jean P Boubli 4 collaborations
Moisès Coll Macià 4 collaborations
Laurits Skov 4 collaborations
Meritxell Riera 3 collaborations
Laksshman Sundaram 3 collaborations
Francois Aguet 3 collaborations
Marjolaine Rousselle 3 collaborations
Idriss S Chuma 3 collaborations
Julie E Horvath 3 collaborations
Fabrício Bertuol 3 collaborations
Idrissa S Chuma 3 collaborations
M Thomas P Gilbert 3 collaborations
Jerilyn A Walker 3 collaborations
Mark A Batzer 3 collaborations
Qi Fang 3 collaborations
Lukas Kuderna 3 collaborations
Huanming Yang 3 collaborations
David N Cooper 3 collaborations
Dong-Dong Wu 3 collaborations
Maria Izabel A Cavassim 3 collaborations
Shaohong Feng 3 collaborations
Guangji Chen 3 collaborations
Yuan Deng 3 collaborations
Erich D Jarvis 3 collaborations
Josefin Stiller 3 collaborations
Vikas Gupta 2 collaborations
Matthew W Hahn 2 collaborations
George P Tiley 2 collaborations
Anne D Yoder 2 collaborations
Tobias Hamp 2 collaborations
Jeffrey Ede 2 collaborations
Jeremy McRae 2 collaborations
Moriel Singer-Berk 2 collaborations
Yanshen Yang 2 collaborations
Yibing Wu 2 collaborations
Aashish Adhikari 2 collaborations
Yair Field 2 collaborations
Chen Chen 2 collaborations
Serafim Batzoglou 2 collaborations
Gabrielle Lemire 2 collaborations
Rebecca Reimers 2 collaborations
Daniel Balick 2 collaborations
João Valsecchi do Amaral 2 collaborations
Mariluce Messias 2 collaborations
Amanda Melin 2 collaborations
Monkol Lek 2 collaborations
Shamil Sunyaev 2 collaborations
Jinbo Xu 2 collaborations
João Valsecchi 2 collaborations
Malu Messias 2 collaborations
Amanda D Melin 2 collaborations
Tomas Marques Bonet 2 collaborations
Samuele Soraggi 2 collaborations
Ewa Rajpert-De Meyts 2 collaborations
Jiao Zheng 2 collaborations
Panyi Li 2 collaborations
Erik F Sørensen 2 collaborations
Liye Zhang 2 collaborations
Jessica M Storer 2 collaborations
Claudia Fontsere 2 collaborations
Lakshmi Seshadri 2 collaborations
Christina M Bergey 2 collaborations
Andrew S Burrell 2 collaborations
Jane E Phillips-Conroy 2 collaborations
Kenneth L Chiou 2 collaborations
Julia Fischer 2 collaborations
Marie-Claude Gingras 2 collaborations
Sejal Salvi 2 collaborations
Harshavardhan Doddapaneni 2 collaborations
Kyle K-H Farh 2 collaborations
Yang Zhou 2 collaborations
Marjolaine Marie C Rousselle 2 collaborations
Meritxell Riera Belles 2 collaborations
Lan Zhao 2 collaborations
Miaoquan Fang 2 collaborations
Jiawei Chen 2 collaborations
Takashi Hayakawa 2 collaborations
Yong-Gang Yao 2 collaborations
Bjarni J Vilhjálmsson 2 collaborations
Andrew G Griffiths 2 collaborations
Marni Tausen 2 collaborations
Duo Xie 2 collaborations
Glenn Hickey 2 collaborations
Marjolaine Rouselle 2 collaborations
Benedict Paten 2 collaborations
Elise A Lucotte 2 collaborations
Agnar Helgason 2 collaborations
Kari Stefansson 2 collaborations
Giulio Formenti 2 collaborations
Xupeng Bi 2 collaborations
Chengran Zhou 2 collaborations
Olivier Fedrigo 2 collaborations
Kerstin Howe 2 collaborations
Uyen Mai 2 collaborations
Agostinho Antunes 2 collaborations
Edward L Braun 2 collaborations
Siavash Mirarab 2 collaborations
Fang Li 2 collaborations
Bao-Lin Zhang 2 collaborations
Sheng Wang 2 collaborations
Wu Chen 2 collaborations
Ming Li 2 collaborations
Xiao-Guang Qi 2 collaborations
Lavinia Ioana Fechete 2 collaborations
Stig U Andersen 2 collaborations
Niraj Shah 1 collaboration
Tomomi Wakabayashi 1 collaboration
Yasuko Kawamura 1 collaboration
Cathrine Kiel Skovbjerg 1 collaboration
Ming-Zhuo Wang 1 collaboration
Yusdar Mustamin 1 collaboration
Yoshiko Isomura 1 collaboration
Haojie Jin 1 collaboration
Terry Mun 1 collaboration
Niels Sandal 1 collaboration
Fuyuki Azuma 1 collaboration
Eigo Fukai 1 collaboration
Ümit Seren 1 collaboration
Shohei Kusakabe 1 collaboration
Yuki Kikuchi 1 collaboration
Shogo Nitanda 1 collaboration
Takashi Kumaki 1 collaboration
Masatsugu Hashiguchi 1 collaboration
Hidenori Tanaka 1 collaboration
Atsushi Hayashi 1 collaboration
Mads Sønderkær 1 collaboration
Kaare Lehmann Nielsen 1 collaboration
Korbinian Schneeberger 1 collaboration
Bjarni Vilhjalmsson 1 collaboration
Ryo Akashi 1 collaboration
Jens Stougaard 1 collaboration
Shusei Sato 1 collaboration
Nina Mørup 1 collaboration
Rytis Stakaitis 1 collaboration
Ieva Golubickaite 1 collaboration
Marlene Danner Dalgaard 1 collaboration
Niels Jørgensen 1 collaboration
Gedske Daugaard 1 collaboration
Anders Juul 1 collaboration
Tychele Turner 1 collaboration
Cyril J Versoza 1 collaboration
Richard J Wang 1 collaboration
Alivia Lee Price 1 collaboration
Ellie Armstrong 1 collaboration
Jedidiah Carlson 1 collaboration
Hwei-Yen Chen 1 collaboration
Kelley Harris 1 collaboration
April Snøfrid Kleppe 1 collaboration
Elora H López-Nandam 1 collaboration
Priya Moorjani 1 collaboration
Susanne P Pfeifer 1 collaboration
Anastasia S D Dietrich 1 collaboration
Petko P Fiziev 1 collaboration
Anne O'Donnell-Luria 1 collaboration
Heidi L Rehm 1 collaboration
Jaco Bakker 1 collaboration
George Pacheco 1 collaboration
Mikkel-Holger S Sinding 1 collaboration
Maria Kamilari 1 collaboration
Xiaoyu Zhan 1 collaboration
Jiazheng Jin 1 collaboration
Xuemei Li 1 collaboration
Haruka Kitayama 1 collaboration
Xiaoguang Qi 1 collaboration
Roger Moraga 1 collaboration
Timothy P Bilton 1 collaboration
Matthew A Campbell 1 collaboration
Rachael Ashby 1 collaboration
Istvan Nagy 1 collaboration
Anar Khan 1 collaboration
Anna Larking 1 collaboration
Craig Anderson 1 collaboration
Benjamin Franzmayr 1 collaboration
Kerry Hancock 1 collaboration
Alicia Scott 1 collaboration
Nick W Ellison 1 collaboration
Murray P Cox 1 collaboration
Torben Asp 1 collaboration
Benjamin Marco Peter 1 collaboration
Zachary Baker 1 collaboration
Carla Hoge 1 collaboration
Molly Schumer 1 collaboration
Molly Przeworski 1 collaboration
Ming Bai 1 collaboration
Cai Li 1 collaboration
Shiping Liu 1 collaboration
Yijie Tong 1 collaboration
Haidong Yang 1 collaboration
Karen E Sears 1 collaboration
Lida M Franco 1 collaboration
Juan Diego Gaitan-Espitia 1 collaboration
Roberto F Nespolo 1 collaboration
Warren E Johnson 1 collaboration
Parice A Brandies 1 collaboration
Carolyn J Hogg 1 collaboration
Katherine Belov 1 collaboration
Marilyn B Renfree 1 collaboration
Kristofer M Helgen 1 collaboration
Jacobus J Boomsma 1 collaboration
John Wakeley 1 collaboration
Asger Hobolth 1 collaboration
Jacob C Ulirsch 1 collaboration
Sabrina Rashid 1 collaboration
Mohamed Ameen 1 collaboration
Anthony J Cox 1 collaboration
Arvind Kumar 1 collaboration
Matthew J Christmas 1 collaboration
Hiram Clawson 1 collaboration
Maximilian Haeussler 1 collaboration
Ioannis Karakikes 1 collaboration
Kevin C Wang 1 collaboration
Adam Siepel 1 collaboration
Anshul Kundaje 1 collaboration
Kerstin Lindblad-Toh 1 collaboration
Jesper Bechsgaard 1 collaboration
Mads Fristrup Schou 1 collaboration
Bram Vanthournout 1 collaboration
Frederik Hendrickx 1 collaboration
Bjarne Knudsen 1 collaboration
Virginia Settepani 1 collaboration
Trine Bilde 1 collaboration
Kalle Leppälä 1 collaboration
Georgios Athanasiadis 1 collaboration
Jade Cheng 1 collaboration
Miriam K Konkel 1 collaboration
Vallmer Jordan 1 collaboration
Cody J Steely 1 collaboration
Thomas O Beckstrom 1 collaboration
Christina Bergey 1 collaboration
Andrew Burrell 1 collaboration
Dominik Schrempf 1 collaboration
Angela Noll 1 collaboration
Maximillian Kothe 1 collaboration
Gisela H Kopp 1 collaboration
Yue Liu 1 collaboration
Shwetha Murali 1 collaboration
Konstantinos Billis 1 collaboration
Fergal J Martin 1 collaboration
Matthieu Muffato 1 collaboration
Laura Cox 1 collaboration
James Else 1 collaboration
Todd Disotell 1 collaboration
Donna M Muzny 1 collaboration
Bronwen Aken 1 collaboration
Evan E Eichler 1 collaboration
Carolin Kosiol 1 collaboration
Jenny Tung 1 collaboration
Richard A Gibbs 1 collaboration
Kim C Worley 1 collaboration
None None 1 collaboration
Garðar Sveinbjörnsson 1 collaboration
Fabrizio Mafessoni 1 collaboration
Margret S Einarsdóttir 1 collaboration
Hakon Jonsson 1 collaboration
Bjarni Halldorsson 1 collaboration
Daniel F Gudbjartsson 1 collaboration
Sofia B Winge 1 collaboration
Chentao Yang 1 collaboration
Stephanie Marcus 1 collaboration
Zhenzhen Song 1 collaboration
Yuanzhen Zhu 1 collaboration
Shangjin Tan 1 collaboration
Jacquelyn Mountcastle 1 collaboration
Bettina Haase 1 collaboration
Jennifer Balacco 1 collaboration
Jonathan Wood 1 collaboration
William Chow 1 collaboration
Arang Rhie 1 collaboration
Martin Pippel 1 collaboration
Margaret M Fabiszak 1 collaboration
Sergey Koren 1 collaboration
Winrich A Freiwald 1 collaboration
Adam M Phillippy 1 collaboration
Al-Aabid Chowdhury 1 collaboration
David A Duchêne 1 collaboration
Alexey Kozlov 1 collaboration
Alexandros Stamatakis 1 collaboration
Santiago Claramunt 1 collaboration
Jacqueline M T Nguyen 1 collaboration
Simon Y W Ho 1 collaboration
Brant C Faircloth 1 collaboration
Julia Haag 1 collaboration
Peter Houde 1 collaboration
Joel Cracraft 1 collaboration
Metin Balaban 1 collaboration
Rongsheng Gao 1 collaboration
Yulong Xie 1 collaboration
Zijian Huang 1 collaboration
Zhen Cao 1 collaboration
Zhi Yan 1 collaboration
Huw A Ogilvie 1 collaboration
Luay Nakhleh 1 collaboration
Bent Lindow 1 collaboration
Benoit Morel 1 collaboration
Jon Fjeldså 1 collaboration
Peter A Hosner 1 collaboration
Rute R da Fonseca 1 collaboration
Bent Petersen 1 collaboration
Joseph A Tobias 1 collaboration
Tamás Székely 1 collaboration
Jonathan David Kennedy 1 collaboration
Andrew Hart Reeve 1 collaboration
Andras Liker 1 collaboration
Martin Stervander 1 collaboration
Dieter Thomas Tietze 1 collaboration
Mads Bertelsen 1 collaboration
Fumin Lei 1 collaboration
Carsten Rahbek 1 collaboration
Gary R Graves 1 collaboration
Tandy Warnow 1 collaboration
Nadolina Brajuka 1 collaboration
Jochen B W Wolf 1 collaboration
Feng Shao 1 collaboration
Jia-Wei Chen 1 collaboration
Chun-Yan Chen 1 collaboration
Xiao-Lin Zhuang 1 collaboration
Hong-Liang Zhu 1 collaboration
Jiang Hu 1 collaboration
Zongyi Sun 1 collaboration
Xin Li 1 collaboration
Depeng Wang 1 collaboration
Yun-Mei Wang 1 collaboration
Gang Li 1 collaboration
Hui-Meng Lu 1 collaboration
Yang Liu 1 collaboration
Peng-Fei Fan 1 collaboration
Li Yu 1 collaboration
Zhi-Jin Liu 1 collaboration
Peter D Stenson 1 collaboration
Ya-Ping Zhang 1 collaboration
Wen Wang 1 collaboration
Manuel Frank 1 collaboration
Francesca Tedeschi 1 collaboration
Marcin Nadzieja 1 collaboration
Malita Malou Malekzadeh Nørgaard 1 collaboration
Jesus Montiel 1 collaboration
Kasper Røjkjær Andersen 1 collaboration
Dugald Reid 1 collaboration
Anna C Larking 1 collaboration
Angus Heslop 1 collaboration
Rina Hannaford 1 collaboration
Craig B Anderson 1 collaboration
Won Hong 1 collaboration
Sushma Prakash 1 collaboration
Wade Mace 1 collaboration
Salome Alikhani 1 collaboration
Rainer W Hofmann 1 collaboration
Sara Moeskjær 1 collaboration
Camous Moslemi 1 collaboration
Bryden Fields 1 collaboration
Asger Bachmann 1 collaboration
J Peter W Young 1 collaboration
Eva Julià 1 collaboration
Jessica Gomez-Garrido 1 collaboration
Aitor Serres-Armero 1 collaboration
Regina Antoni Alandes 1 collaboration
Marina Alvarez-Estape 1 collaboration
Heath Simon 1 collaboration
Tyler Alioto 1 collaboration
Oscar Fornas 1 collaboration
Julien Y Dutheil 1 collaboration
Zefu Wang 1 collaboration
Wei Pang 1 collaboration
Meng-Ting Luo 1 collaboration
Wen-Qiang He 1 collaboration
Min-Min Yang 1 collaboration
Yajiang Wu 1 collaboration
Lu Wang 1 collaboration
Hugo Fernández-Bellon 1 collaboration
Sandra Molloy 1 collaboration
Hélène Meunier 1 collaboration
Fanélie Wanert 1 collaboration
Zhijin Liu 1 collaboration
Jianquan Liu 1 collaboration
Yong-Tang Zheng 1 collaboration
Valdís Björt Guðmundsdóttir 1 collaboration
Jacob M Jensen 1 collaboration
Chaowei Zhang 1 collaboration
Kerry Reid 1 collaboration
Arthur F Sands 1 collaboration
Antoine Fraimout 1 collaboration
Juha Merilä 1 collaboration
Juraj Bergmann 1 collaboration
Anastasia Dietrich 1 collaboration
Petko Fiziev 1 collaboration
Julie Horvath 1 collaboration
Fabricio Bertuol 1 collaboration
Thomas Batallion 1 collaboration
Anne O'Donnell 1 collaboration
Heidi Rehm 1 collaboration
Rasmus Ø Pedersen 1 collaboration
Erick J Lundgren 1 collaboration
Rhys T Lemoine 1 collaboration
Sophie Monsarrat 1 collaboration
Elena A Pearce 1 collaboration
Jens-Christian Svenning 1 collaboration
Elise Anne Lucotte 1 collaboration
Maria Izabel Alvez Cavassim 1 collaboration
David Castellano 1 collaboration
Florent Murat 1 collaboration
Noe Mbengue 1 collaboration
Sofia Boeg Winge 1 collaboration
Timo Trefzer 1 collaboration
Evgeny Leushkin 1 collaboration
Mari Sepp 1 collaboration
Margarida Cardoso-Moreira 1 collaboration
Julia Schmidt 1 collaboration
Celine Schneider 1 collaboration
Katharina Mößinger 1 collaboration
Thoomke Brüning 1 collaboration
Francesco Lamanna 1 collaboration
Christian Conrad 1 collaboration
Ivanela Kondova 1 collaboration
Ronald Bontrop 1 collaboration
Rüdiger Behr 1 collaboration
Philipp Khaitovich 1 collaboration
Svante Pääbo 1 collaboration
Frank Grützner 1 collaboration
Henrik Kaessmann 1 collaboration
Mads Frost Bertelsen 1 collaboration
Benoit Quintard 1 collaboration
Joseph I Hoffman 1 collaboration
Zhipeng Li 1 collaboration
Judy St Leger 1 collaboration
Changwei Shao 1 collaboration