Michael S Westphall

Affiliations

Genome Center of Wisconsin and Departments of Chemistry and Biomolecular Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.

Publications (26)

Single-Shot Capillary Zone Electrophoresis-Tandem Mass Spectrometry Produces over 4400 Phosphopeptide Identifications from a 220 ng Sample.

Journal of proteome research

Avec: Zhenbin Zhang , Alexander S Hebert , Joshua J Coon , Norman J Dovichi

Top-Down Characterization of an Intact Monoclonal Antibody Using Activated Ion Electron Transfer Dissociation.

Analytical chemistry

Avec: Jean M Lodge , Kevin L Schauer , Dain R Brademan , Nicholas M Riley , Evgenia Shishkova , Joshua J Coon

Global Phosphoproteome Analysis Using High-Field Asymmetric Waveform Ion Mobility Spectrometry on a Hybrid Orbitrap Mass Spectrometer.

Analytical chemistry

Avec: Laura K Muehlbauer , Alexander S Hebert , Evgenia Shishkova , Joshua J Coon

Phosphorothioate RNA Analysis by NETD Tandem Mass Spectrometry.

Molecular & cellular proteomics : MCP

Avec: Trenton M Peters-Clarke , Qiuwen Quan , Benton J Anderson , William M McGee , Emily Lohr , Alexander S Hebert , Joshua J Coon

Three-dimensional structure determination of protein complexes using matrix-landing mass spectrometry.

Nature communications

Avec: Kenneth W Lee , Austin Z Salome , Jean M Lodge , Timothy Grant , Joshua J Coon

Matrix-Landing Mass Spectrometry for Electron Microscopy Imaging of Native Protein Complexes.

Analytical chemistry

Avec: Austin Z Salome , Kenneth W Lee , Timothy Grant , Joshua J Coon

Global detection of human variants and isoforms by deep proteome sequencing.

Nature biotechnology

Avec: Pavel Sinitcyn , Alicia L Richards , Robert J Weatheritt , Dain R Brademan , Harald Marx , Evgenia Shishkova , Jesse G Meyer , Alexander S Hebert , Benjamin J Blencowe , Jürgen Cox , Joshua J Coon

Onto Grid Purification and 3D Reconstruction of Protein Complexes Using Matrix-Landing Native Mass Spectrometry.

Journal of proteome research

Avec: Kenneth W Lee , Austin Z Salome , Timothy Grant , Joshua J Coon

Evaluation of the Orbitrap Ascend Tribrid Mass Spectrometer for Shotgun Proteomics.

Analytical chemistry

Avec: Yuchen He , Evgenia Shishkova , Trenton M Peters-Clarke , Dain R Brademan , David Bergen , Jingjing Huang , Romain Huguet , Michael W Senko , Vlad Zabrouskov , Graeme C McAlister , Joshua J Coon

One-Hour Phosphoproteome Analysis with the Orbitrap Astral Mass Spectrometer.

bioRxiv : the preprint server for biology

Avec: Noah M Lancaster , Pavel Sinitcyn , Patrick Forny , Trenton M Peters-Clarke , Caroline Fecher , Andrew J Smith , Evgenia Shishkova , Tabiwang N Arrey , Anna Pashkova , Margaret Lea Robinson , Nicholas Arp , Jing Fan , Juli Hansen , Andrea Galmozzi , Lia R Serrano , Hamish Stewart , Christian Hock , Eugen Damoc , David J Pagliarini , Vlad Zabrouskov , Joshua J Coon

Real-time health monitoring through urine metabolomics.

NPJ digital medicine

Avec: Ian J Miller , Sean R Peters , Katherine A Overmyer , Brett R Paulson , Joshua J Coon

Optical Fiber-Enabled Photoactivation of Peptides and Proteins.

Analytical chemistry

Avec: Trenton M Peters-Clarke , Kevin L Schauer , Nicholas M Riley , Jean M Lodge , Joshua J Coon

Boosting the Sensitivity of Quantitative Single-Cell Proteomics with Infrared-Tandem Mass Tags.

Journal of proteome research

Avec: Trenton M Peters-Clarke , Yiran Liang , Keaton L Mertz , Kenneth W Lee , Joshua D Hinkle , Graeme C McAlister , John E P Syka , Ryan T Kelly , Joshua J Coon

Cryogenic Soft Landing Improves Structural Preservation of Protein Complexes.

bioRxiv : the preprint server for biology

Avec: Kenneth W Lee , Colin Hemme , Austin Z Salome , Keaton Mertz , Timothy Grant , Joshua J Coon

Cryogenic Soft Landing Improves Structural Preservation of Protein Complexes.

Analytical chemistry

Avec: Kenneth W Lee , Colin Hemme , Austin Z Salome , Keaton Mertz , Timothy Grant , Joshua J Coon

Multi-Omic Single-Shot Technology for Integrated Proteome and Lipidome Analysis.

Analytical chemistry

Avec: Yuchen He , Edrees H Rashan , Vanessa Linke , Evgenia Shishkova , Alexander S Hebert , Adam Jochem , David J Pagliarini , Katherine A Overmyer , Joshua J Coon

Ribonucleic Acid Sequence Characterization by Negative Electron Transfer Dissociation Mass Spectrometry.

Analytical chemistry

Avec: Trenton M Peters-Clarke , Qiuwen Quan , Dain R Brademan , Alexander S Hebert , Joshua J Coon

Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation.

Cell reports

Avec: Sara C Buch-Larsen , Ivo A Hendriks , Jean M Lodge , Martin Rykær , Benjamin Furtwängler , Evgenia Shishkova , Joshua J Coon , Michael L Nielsen

Defining mitochondrial protein functions through deep multiomic profiling.

Nature

Avec: Jarred W Rensvold , Evgenia Shishkova , Yuriy Sverchkov , Ian J Miller , Arda Cetinkaya , Angela Pyle , Mateusz Manicki , Dain R Brademan , Yasemin Alanay , Julian Raiman , Adam Jochem , Paul D Hutchins , Sean R Peters , Vanessa Linke , Katherine A Overmyer , Austin Z Salome , Alexander S Hebert , Catherine E Vincent , Nicholas W Kwiecien , Matthew J P Rush , Mark Craven , Nurten A Akarsu , Robert W Taylor , Joshua J Coon , David J Pagliarini

Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis.

Nature communications

Avec: Nicholas M Riley , Alexander S Hebert , Joshua J Coon

Practical Effects of Intramolecular Hydrogen Rearrangement in Electron Transfer Dissociation-Based Proteomics.

Journal of the American Society for Mass Spectrometry

Avec: Trenton M Peters-Clarke , Nicholas M Riley , Joshua J Coon

Argonaut: A Web Platform for Collaborative Multi-omic Data Visualization and Exploration.

Patterns (New York, N.Y.)

Avec: Dain R Brademan , Ian J Miller , Nicholas W Kwiecien , David J Pagliarini , Joshua J Coon , Evgenia Shishkova

Proteomics, Lipidomics, Metabolomics, and 16S DNA Sequencing of Dental Plaque From Patients With Diabetes and Periodontal Disease.

Molecular & cellular proteomics : MCP

Avec: Katherine A Overmyer , Timothy W Rhoads , Anna E Merrill , Zhan Ye , Amit Acharya , Sanjay K Shukla , Joshua J Coon

Infrared Photoactivation Boosts Reporter Ion Yield in Isobaric Tagging.

Analytical chemistry

Avec: Kenneth W Lee , Trenton M Peters-Clarke , Keaton L Mertz , Graeme C McAlister , John E P Syka , Joshua J Coon

Mass spectrometers as cryoEM grid preparation instruments.

Current opinion in structural biology

Avec: Kenneth W Lee , Austin Z Salome , Joshua J Coon , Timothy Grant

Fast and deep phosphoproteome analysis with the Orbitrap Astral mass spectrometer.

Nature communications

Avec: Noah M Lancaster , Pavel Sinitcyn , Patrick Forny , Trenton M Peters-Clarke , Caroline Fecher , Andrew J Smith , Evgenia Shishkova , Tabiwang N Arrey , Anna Pashkova , Margaret Lea Robinson , Nicholas Arp , Jing Fan , Juli Hansen , Andrea Galmozzi , Lia R Serrano , Julie Rojas , Audrey P Gasch , Hamish Stewart , Christian Hock , Eugen Damoc , David J Pagliarini , Vlad Zabrouskov , Joshua J Coon

Réseau de co-auteurs

Joshua J Coon 26 collaborations

Evgenia Shishkova 10 collaborations

Trenton M Peters-Clarke 9 collaborations

Alexander S Hebert 8 collaborations

Kenneth W Lee 8 collaborations

Austin Z Salome 7 collaborations

Dain R Brademan 6 collaborations

Timothy Grant 6 collaborations

David J Pagliarini 5 collaborations

Jean M Lodge 4 collaborations

Nicholas M Riley 4 collaborations

Katherine A Overmyer 4 collaborations

Pavel Sinitcyn 3 collaborations

Vlad Zabrouskov 3 collaborations

Graeme C McAlister 3 collaborations

Ian J Miller 3 collaborations

Kevin L Schauer 2 collaborations

Qiuwen Quan 2 collaborations

Yuchen He 2 collaborations

Noah M Lancaster 2 collaborations

Patrick Forny 2 collaborations

Caroline Fecher 2 collaborations

Andrew J Smith 2 collaborations

Tabiwang N Arrey 2 collaborations

Anna Pashkova 2 collaborations

Margaret Lea Robinson 2 collaborations

Nicholas Arp 2 collaborations

Jing Fan 2 collaborations

Juli Hansen 2 collaborations

Andrea Galmozzi 2 collaborations

Lia R Serrano 2 collaborations

Hamish Stewart 2 collaborations

Christian Hock 2 collaborations

Eugen Damoc 2 collaborations

Sean R Peters 2 collaborations

Keaton L Mertz 2 collaborations

John E P Syka 2 collaborations

Colin Hemme 2 collaborations

Keaton Mertz 2 collaborations

Vanessa Linke 2 collaborations

Adam Jochem 2 collaborations

Nicholas W Kwiecien 2 collaborations

Zhenbin Zhang 1 collaboration

Norman J Dovichi 1 collaboration

Laura K Muehlbauer 1 collaboration

Benton J Anderson 1 collaboration

William M McGee 1 collaboration

Emily Lohr 1 collaboration

Alicia L Richards 1 collaboration

Robert J Weatheritt 1 collaboration

Harald Marx 1 collaboration

Jesse G Meyer 1 collaboration

Benjamin J Blencowe 1 collaboration

Jürgen Cox 1 collaboration

David Bergen 1 collaboration

Jingjing Huang 1 collaboration

Romain Huguet 1 collaboration

Michael W Senko 1 collaboration

Brett R Paulson 1 collaboration

Yiran Liang 1 collaboration

Joshua D Hinkle 1 collaboration

Ryan T Kelly 1 collaboration

Edrees H Rashan 1 collaboration

Sara C Buch-Larsen 1 collaboration

Ivo A Hendriks 1 collaboration

Martin Rykær 1 collaboration

Benjamin Furtwängler 1 collaboration

Michael L Nielsen 1 collaboration

Jarred W Rensvold 1 collaboration

Yuriy Sverchkov 1 collaboration

Arda Cetinkaya 1 collaboration

Angela Pyle 1 collaboration

Mateusz Manicki 1 collaboration

Yasemin Alanay 1 collaboration

Julian Raiman 1 collaboration

Paul D Hutchins 1 collaboration

Catherine E Vincent 1 collaboration

Matthew J P Rush 1 collaboration

Mark Craven 1 collaboration

Nurten A Akarsu 1 collaboration

Robert W Taylor 1 collaboration

Timothy W Rhoads 1 collaboration

Anna E Merrill 1 collaboration

Zhan Ye 1 collaboration

Amit Acharya 1 collaboration

Sanjay K Shukla 1 collaboration

Julie Rojas 1 collaboration

Audrey P Gasch 1 collaboration