Matin Nuhamunada

Affiliations

The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby 2800, Denmark.

ORCID: 0000-0003-3177-8299

Publications (8)

BGCFlow: systematic pangenome workflow for the analysis of biosynthetic gene clusters across large genomic datasets.

Nucleic acids research

Avec: Omkar S Mohite , Patrick V Phaneuf , Bernhard O Palsson , Tilmann Weber

The high mutation rate at the D614G hotspot-furin cleavage site region increases the priming efficiency of the Spike protein by furin protease: analysis of Indonesian SARS-CoV-2 G614 variants obtained during the early COVID-19 pandemic.

Virusdisease

Avec: Faris Muhammad Gazali , Nastiti Wijayanti , Mohamad Saifudin Hakim , Endah Supriyati , Eggi Arguni , Marselinus Edwin Widyanto Daniwijaya , Titik Nuryastuti , Rahma Nabilla , Sofia Mubarika Haryana , Tri Wibawa

Detection of SARS-CoV-2 spike protein D614G mutation by qPCR-HRM analysis.

Heliyon

Avec: Faris Muhammad Gazali , Rahma Nabilla , Endah Supriyati , Mohamad Saifudin Hakim , Eggi Arguni , Edwin Widyanto Daniwijaya , Titik Nuryastuti , Sofia Mubarika Haryana , Tri Wibawa , Nastiti Wijayanti

Evolutionary dynamics of SARS-CoV-2 circulating in Yogyakarta and Central Java, Indonesia: sequence analysis covering furin cleavage site (FCS) region of the spike protein.

International microbiology : the official journal of the Spanish Society for Microbiology

Avec: Nastiti Wijayanti , Faris Muhammad Gazali , Endah Supriyati , Mohamad Saifudin Hakim , Eggi Arguni , Marselinus Edwin Widyanto Daniwijaya , Titik Nuryastuti , Rahma Nabilla , Sofia Mubarika Haryana , Tri Wibawa

A treasure trove of 1034 actinomycete genomes.

Nucleic acids research

Avec: Tue Sparholt Jørgensen , Omkar S Mohite , Eva B Sterndorff , Maria Alvarez-Arevalo , Kai Blin , Thomas J Booth , Pep Charusanti , David Faurdal , Troels Ø Hansen , Anna-Sophie Mourched , Bernhard Ø Palsson , Tilmann Weber

Long-Read Metagenome-Assembled Genomes Improve Identification of Novel Complete Biosynthetic Gene Clusters in a Complex Microbial Activated Sludge Ecosystem.

mSystems

Avec: Roberto Sánchez-Navarro , Omkar S Mohite , Kenneth Wasmund , Mads Albertsen , Lone Gram , Per H Nielsen , Tilmann Weber , Caitlin M Singleton

UmetaFlow: an untargeted metabolomics workflow for high-throughput data processing and analysis.

Journal of cheminformatics

Avec: Eftychia E Kontou , Axel Walter , Oliver Alka , Julianus Pfeuffer , Timo Sachsenberg , Omkar S Mohite , Oliver Kohlbacher , Tilmann Weber

BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes.

Nucleic acids research

Avec: Caner Bağcı , Hemant Goyat , Casimir Ladanyi , Ludek Sehnal , Kai Blin , Satria A Kautsar , Azat Tagirdzhanov , Alexey Gurevich , Shrikant Mantri , Christian von Mering , Daniel Udwary , Marnix H Medema , Tilmann Weber , Nadine Ziemert

Réseau de co-auteurs

Tilmann Weber 5 collaborations

Omkar S Mohite 4 collaborations

Faris Muhammad Gazali 3 collaborations

Nastiti Wijayanti 3 collaborations

Mohamad Saifudin Hakim 3 collaborations

Endah Supriyati 3 collaborations

Eggi Arguni 3 collaborations

Titik Nuryastuti 3 collaborations

Rahma Nabilla 3 collaborations

Sofia Mubarika Haryana 3 collaborations

Tri Wibawa 3 collaborations

Marselinus Edwin Widyanto Daniwijaya 2 collaborations

Kai Blin 2 collaborations

Patrick V Phaneuf 1 collaboration

Bernhard O Palsson 1 collaboration

Edwin Widyanto Daniwijaya 1 collaboration

Tue Sparholt Jørgensen 1 collaboration

Eva B Sterndorff 1 collaboration

Maria Alvarez-Arevalo 1 collaboration

Thomas J Booth 1 collaboration

Pep Charusanti 1 collaboration

David Faurdal 1 collaboration

Troels Ø Hansen 1 collaboration

Anna-Sophie Mourched 1 collaboration

Bernhard Ø Palsson 1 collaboration

Roberto Sánchez-Navarro 1 collaboration

Kenneth Wasmund 1 collaboration

Mads Albertsen 1 collaboration

Lone Gram 1 collaboration

Per H Nielsen 1 collaboration

Caitlin M Singleton 1 collaboration

Eftychia E Kontou 1 collaboration

Axel Walter 1 collaboration

Oliver Alka 1 collaboration

Julianus Pfeuffer 1 collaboration

Timo Sachsenberg 1 collaboration

Oliver Kohlbacher 1 collaboration

Caner Bağcı 1 collaboration

Hemant Goyat 1 collaboration

Casimir Ladanyi 1 collaboration

Ludek Sehnal 1 collaboration

Satria A Kautsar 1 collaboration

Azat Tagirdzhanov 1 collaboration

Alexey Gurevich 1 collaboration

Shrikant Mantri 1 collaboration

Christian von Mering 1 collaboration

Daniel Udwary 1 collaboration

Marnix H Medema 1 collaboration

Nadine Ziemert 1 collaboration