Mahdi Golkaram

Affiliations

Department of Mechanical Engineering, University of California, Santa Barbara, Santa Barbara, CA, USA.

Publications (18)

Supramolecular Polymer Brushes: Influence of Molecular Weight and Cross-Linking on Linear Viscoelastic Behavior.

Macromolecules

Avec: Milad Golkaram , Evelyne van Ruymbeke , Giuseppe Portale , Katja Loos

ETV4 is a mechanical transducer linking cell crowding dynamics to lineage specification.

Nature cell biology

Avec: Seungbok Yang , Seyoun Oh , Yujeong Oh , Yoonjae Cho , Jeehyun Yoe , Sungeun Ju , Matthew A Lalli , Seung-Yeol Park , Yoontae Lee , Jiwon Jang

Spatiotemporal evolution of the clear cell renal cell carcinoma microenvironment links intra-tumoral heterogeneity to immune escape.

Genome medicine

Avec: Fengshen Kuo , Sounak Gupta , Maria I Carlo , Michael L Salmans , Raakhee Vijayaraghavan , Cerise Tang , Vlad Makarov , Phillip Rappold , Kyle A Blum , Chen Zhao , Rami Mehio , Shile Zhang , Jim Godsey , Traci Pawlowski , Renzo G DiNatale , Luc G T Morris , Jeremy Durack , Paul Russo , Ritesh R Kotecha , Jonathan Coleman , Ying-Bei Chen , Victor E Reuter , Robert J Motzer , Martin H Voss , Li Liu , Ed Reznik , Timothy A Chan , A Ari Hakimi

A Critical Approach to Polymer Dynamics in Supramolecular Polymers.

Macromolecules

Avec: Milad Golkaram , Katja Loos

A Targetable Myeloid Inflammatory State Governs Disease Recurrence in Clear-Cell Renal Cell Carcinoma.

Cancer discovery

Avec: Phillip M Rappold , Lynda Vuong , Josef Leibold , Nicholas H Chakiryan , Michael Curry , Fengshen Kuo , Erich Sabio , Hui Jiang , Briana G Nixon , Ming Liu , Anders E Berglund , Andrew W Silagy , Eduardo A Mascareno , Mahtab Marker , Albert Reising , Alexander Savchenko , John Millholland , Ying-Bei Chen , Paul Russo , Jonathan Coleman , Ed Reznik , Brandon J Manley , Irina Ostrovnaya , Vladimir Makarov , Renzo G DiNatale , Kyle A Blum , Xiaoxiao Ma , Diego Chowell , Ming O Li , David B Solit , Scott W Lowe , Timothy A Chan , Robert J Motzer , Martin H Voss , A Ari Hakimi

Clinical-genomic determinants of immune checkpoint blockade response in head and neck squamous cell carcinoma.

The Journal of clinical investigation

Avec: Cristina Valero , Joris L Vos , Bin Xu , Conall Fitzgerald , Mark Lee , Shannon Kaplan , Catherine Y Han , Xin Pei , Reith Sarkar , Lillian A Boe , Abhinav Pandey , Elizabeth S Koh , Charlotte L Zuur , David B Solit , Traci Pawlowski , Li Liu , Alan L Ho , Diego Chowell , Nadeem Riaz , Timothy A Chan , Luc Gt Morris

Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy.

Cancer cell

Avec: Chirag Krishna , Renzo G DiNatale , Fengshen Kuo , Raghvendra M Srivastava , Lynda Vuong , Diego Chowell , Sounak Gupta , Chad Vanderbilt , Tanaya A Purohit , Ming Liu , Emily Kansler , Briana G Nixon , Ying-Bei Chen , Vladimir Makarov , Kyle A Blum , Kyrollis Attalla , Stanley Weng , Michael L Salmans , Li Liu , Shile Zhang , Raakhee Vijayaraghavan , Traci Pawlowski , Victor Reuter , Maria I Carlo , Martin H Voss , Jonathan Coleman , Paul Russo , Robert J Motzer , Ming O Li , Christina S Leslie , Timothy A Chan , A Ari Hakimi

HERVs establish a distinct molecular subtype in stage II/III colorectal cancer with poor outcome.

NPJ genomic medicine

Avec: Michael L Salmans , Shannon Kaplan , Raakhee Vijayaraghavan , Marta Martins , Nafeesa Khan , Cassandra Garbutt , Aaron Wise , Joyee Yao , Sandra Casimiro , Catarina Abreu , Daniela Macedo , Ana Lúcia Costa , Cecília Alvim , André Mansinho , Pedro Filipe , Pedro Marques da Costa , Afonso Fernandes , Paula Borralho , Cristina Ferreira , Fernando Aldeia , João Malaquias , Jim Godsey , Alex So , Traci Pawlowski , Luis Costa , Shile Zhang , Li Liu

Genetic and microenvironmental intra-tumor heterogeneity impacts colorectal cancer evolution and metastatic development.

Communications biology

Avec: Daniel Sobral , Marta Martins , Shannon Kaplan , Michael Salmans , Nafeesa Khan , Raakhee Vijayaraghavan , Sandra Casimiro , Afonso Fernandes , Paula Borralho , Cristina Ferreira , Rui Pinto , Catarina Abreu , Ana Lúcia Costa , Shile Zhang , Traci Pawlowski , Jim Godsey , André Mansinho , Daniela Macedo , Soraia Lobo-Martins , Pedro Filipe , Rui Esteves , João Coutinho , Paulo Matos Costa , Afonso Ramires , Fernando Aldeia , António Quintela , Alex So , Li Liu , Ana Rita Grosso , Luis Costa

Immunometabolic coevolution defines unique microenvironmental niches in ccRCC.

Cell metabolism

Avec: Cerise Tang , Amy X Xie , Eric Minwei Liu , Fengshen Kuo , Minsoo Kim , Renzo G DiNatale , Ying-Bei Chen , Sounak Gupta , Robert J Motzer , Paul Russo , Jonathan Coleman , Maria I Carlo , Martin H Voss , Ritesh R Kotecha , Chung-Han Lee , Wesley Tansey , Nikolaus Schultz , A Ari Hakimi , Ed Reznik

Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA.

Scientific reports

Avec: Binsheng Gong , Samir Lababidi , Rebecca Kusko , Khaled Bouri , Sarah Prezek , Vishal Thovarai , Anish Prasanna , Ezekiel J Maier , Xingqiang Sun , Konstantinos Kyriakidis , João Paulo Kitajima , Sayed Mohammad Ebrahim Sahraeian , Yunfei Guo , Elaine Johanson , Wendell Jones , Weida Tong , Joshua Xu

Prediction of Acrylonitrile-Butadiene-Styrene Mechanical Properties through Compressed-Sensing Techniques.

Journal of chemical information and modeling

Avec: Jonah Poort , Milad Golkaram , Pieter Janssen , Jan Harm Urbanus

Control over single-cell distribution of G1 lengths by WNT governs pluripotency.

PLoS biology

Avec: Jiwon Jang , Dasol Han , Morgane Audouard , Guojing Liu , Daniel Bridges , Stefan Hellander , Alex Chialastri , Siddharth S Dey , Linda R Petzold , Kenneth S Kosik

Supramolecular Mimic for Bottlebrush Polymers in Bulk.

ACS omega

Avec: Milad Golkaram , Laura Boetje , Jingjin Dong , Luis Enrique Aguilar Suarez , Csaba Fodor , Dina Maniar , Evelyne van Ruymbeke , Shirin Faraji , Giuseppe Portale , Katja Loos

The interplay between cancer type, panel size and tumor mutational burden threshold in patient selection for cancer immunotherapy.

PLoS computational biology

Avec: Chen Zhao , Kristina Kruglyak , Shile Zhang , Sven Bilke

Novel Genetic Subtypes of Urothelial Carcinoma With Differential Outcomes on Immune Checkpoint Blockade.

Journal of clinical oncology : official journal of the American Society of Clinical Oncology

Avec: Michal Sarfaty , Samuel A Funt , Hikmat Al-Ahmadie , Shannon Kaplan , Fan Song , Ashley Regazzi , Vladimir Makarov , Fengshen Kuo , Irina Ostrovnaya , Venkatraman Seshan , Chen Zhao , Benjamin Greenbaum , Li Liu , Jonathan E Rosenberg , Timothy A Chan

Comprehensive Genomic Profiling of Cell-Free Circulating Tumor DNA Detects Response to Ribociclib Plus Letrozole in a Patient with Metastatic Breast Cancer.

Biomolecules

Avec: Catarina Silveira , Ana Carla Sousa , Patrícia Corredeira , Marta Martins , Ana Rita Sousa , Arnaud Da Cruz Paula , Pier Selenica , David N Brown , Shannon Kaplan , Shile Zhang , Li Liu , Britta Weigelt , Jorge S Reis-Filho , Luís Costa , Maria Carmo-Fonseca

Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization.

BMC bioinformatics

Avec: Carolina Peixoto , Marta B Lopes , Marta Martins , Sandra Casimiro , Daniel Sobral , Ana Rita Grosso , Catarina Abreu , Daniela Macedo , Ana Lúcia Costa , Helena Pais , Cecília Alvim , André Mansinho , Pedro Filipe , Pedro Marques da Costa , Afonso Fernandes , Paula Borralho , Cristina Ferreira , João Malaquias , António Quintela , Shannon Kaplan , Michael Salmans , Nafeesa Khan , Raakhee Vijayaraghavan , Shile Zhang , Traci Pawlowski , Jim Godsey , Alex So , Li Liu , Luís Costa , Susana Vinga

Réseau de co-auteurs

Li Liu 8 collaborations

Shile Zhang 7 collaborations

Traci Pawlowski 6 collaborations

Shannon Kaplan 6 collaborations

Fengshen Kuo 5 collaborations

Raakhee Vijayaraghavan 5 collaborations

Timothy A Chan 5 collaborations

Milad Golkaram 4 collaborations

Jim Godsey 4 collaborations

Renzo G DiNatale 4 collaborations

Paul Russo 4 collaborations

Jonathan Coleman 4 collaborations

Ying-Bei Chen 4 collaborations

Robert J Motzer 4 collaborations

Martin H Voss 4 collaborations

A Ari Hakimi 4 collaborations

Marta Martins 4 collaborations

Katja Loos 3 collaborations

Sounak Gupta 3 collaborations

Maria I Carlo 3 collaborations

Michael L Salmans 3 collaborations

Kyle A Blum 3 collaborations

Chen Zhao 3 collaborations

Ed Reznik 3 collaborations

Vladimir Makarov 3 collaborations

Diego Chowell 3 collaborations

Nafeesa Khan 3 collaborations

Sandra Casimiro 3 collaborations

Catarina Abreu 3 collaborations

Daniela Macedo 3 collaborations

Ana Lúcia Costa 3 collaborations

André Mansinho 3 collaborations

Pedro Filipe 3 collaborations

Afonso Fernandes 3 collaborations

Paula Borralho 3 collaborations

Cristina Ferreira 3 collaborations

Alex So 3 collaborations

Evelyne van Ruymbeke 2 collaborations

Giuseppe Portale 2 collaborations

Jiwon Jang 2 collaborations

Cerise Tang 2 collaborations

Ritesh R Kotecha 2 collaborations

Lynda Vuong 2 collaborations

Briana G Nixon 2 collaborations

Ming Liu 2 collaborations

Irina Ostrovnaya 2 collaborations

Ming O Li 2 collaborations

David B Solit 2 collaborations

Cecília Alvim 2 collaborations

Pedro Marques da Costa 2 collaborations

Fernando Aldeia 2 collaborations

João Malaquias 2 collaborations

Luis Costa 2 collaborations

Daniel Sobral 2 collaborations

Michael Salmans 2 collaborations

António Quintela 2 collaborations

Ana Rita Grosso 2 collaborations

Luís Costa 2 collaborations

Seungbok Yang 1 collaboration

Seyoun Oh 1 collaboration

Yujeong Oh 1 collaboration

Yoonjae Cho 1 collaboration

Jeehyun Yoe 1 collaboration

Sungeun Ju 1 collaboration

Matthew A Lalli 1 collaboration

Seung-Yeol Park 1 collaboration

Yoontae Lee 1 collaboration

Vlad Makarov 1 collaboration

Phillip Rappold 1 collaboration

Rami Mehio 1 collaboration

Luc G T Morris 1 collaboration

Jeremy Durack 1 collaboration

Victor E Reuter 1 collaboration

Phillip M Rappold 1 collaboration

Josef Leibold 1 collaboration

Nicholas H Chakiryan 1 collaboration

Michael Curry 1 collaboration

Erich Sabio 1 collaboration

Hui Jiang 1 collaboration

Anders E Berglund 1 collaboration

Andrew W Silagy 1 collaboration

Eduardo A Mascareno 1 collaboration

Mahtab Marker 1 collaboration

Albert Reising 1 collaboration

Alexander Savchenko 1 collaboration

John Millholland 1 collaboration

Brandon J Manley 1 collaboration

Xiaoxiao Ma 1 collaboration

Scott W Lowe 1 collaboration

Cristina Valero 1 collaboration

Joris L Vos 1 collaboration

Bin Xu 1 collaboration

Conall Fitzgerald 1 collaboration

Mark Lee 1 collaboration

Catherine Y Han 1 collaboration

Xin Pei 1 collaboration

Reith Sarkar 1 collaboration

Lillian A Boe 1 collaboration

Abhinav Pandey 1 collaboration

Elizabeth S Koh 1 collaboration

Charlotte L Zuur 1 collaboration

Alan L Ho 1 collaboration

Nadeem Riaz 1 collaboration

Luc Gt Morris 1 collaboration

Chirag Krishna 1 collaboration

Raghvendra M Srivastava 1 collaboration

Chad Vanderbilt 1 collaboration

Tanaya A Purohit 1 collaboration

Emily Kansler 1 collaboration

Kyrollis Attalla 1 collaboration

Stanley Weng 1 collaboration

Victor Reuter 1 collaboration

Christina S Leslie 1 collaboration

Cassandra Garbutt 1 collaboration

Aaron Wise 1 collaboration

Joyee Yao 1 collaboration

Rui Pinto 1 collaboration

Soraia Lobo-Martins 1 collaboration

Rui Esteves 1 collaboration

João Coutinho 1 collaboration

Paulo Matos Costa 1 collaboration

Afonso Ramires 1 collaboration

Amy X Xie 1 collaboration

Eric Minwei Liu 1 collaboration

Minsoo Kim 1 collaboration

Chung-Han Lee 1 collaboration

Wesley Tansey 1 collaboration

Nikolaus Schultz 1 collaboration

Binsheng Gong 1 collaboration

Samir Lababidi 1 collaboration

Rebecca Kusko 1 collaboration

Khaled Bouri 1 collaboration

Sarah Prezek 1 collaboration

Vishal Thovarai 1 collaboration

Anish Prasanna 1 collaboration

Ezekiel J Maier 1 collaboration

Xingqiang Sun 1 collaboration

Konstantinos Kyriakidis 1 collaboration

João Paulo Kitajima 1 collaboration

Sayed Mohammad Ebrahim Sahraeian 1 collaboration

Yunfei Guo 1 collaboration

Elaine Johanson 1 collaboration

Wendell Jones 1 collaboration

Weida Tong 1 collaboration

Joshua Xu 1 collaboration

Jonah Poort 1 collaboration

Pieter Janssen 1 collaboration

Jan Harm Urbanus 1 collaboration

Dasol Han 1 collaboration

Morgane Audouard 1 collaboration

Guojing Liu 1 collaboration

Daniel Bridges 1 collaboration

Stefan Hellander 1 collaboration

Alex Chialastri 1 collaboration

Siddharth S Dey 1 collaboration

Linda R Petzold 1 collaboration

Kenneth S Kosik 1 collaboration

Laura Boetje 1 collaboration

Jingjin Dong 1 collaboration

Luis Enrique Aguilar Suarez 1 collaboration

Csaba Fodor 1 collaboration

Dina Maniar 1 collaboration

Shirin Faraji 1 collaboration

Kristina Kruglyak 1 collaboration

Sven Bilke 1 collaboration

Michal Sarfaty 1 collaboration

Samuel A Funt 1 collaboration

Hikmat Al-Ahmadie 1 collaboration

Fan Song 1 collaboration

Ashley Regazzi 1 collaboration

Venkatraman Seshan 1 collaboration

Benjamin Greenbaum 1 collaboration

Jonathan E Rosenberg 1 collaboration

Catarina Silveira 1 collaboration

Ana Carla Sousa 1 collaboration

Patrícia Corredeira 1 collaboration

Ana Rita Sousa 1 collaboration

Arnaud Da Cruz Paula 1 collaboration

Pier Selenica 1 collaboration

David N Brown 1 collaboration

Britta Weigelt 1 collaboration

Jorge S Reis-Filho 1 collaboration

Maria Carmo-Fonseca 1 collaboration

Carolina Peixoto 1 collaboration

Marta B Lopes 1 collaboration

Helena Pais 1 collaboration

Susana Vinga 1 collaboration