Juliane Liepe

Affiliations

Max-Planck-Institute for Biophysical Chemistry, 37077 Göttingen, Germany. jliepe@mpibpc.mpg.de.

Publications (20)

Untangling Extracellular Proteasome-Osteopontin Circuit Dynamics in Multiple Sclerosis.

Cells

Avec: Chiara Dianzani , Domizia Vecchio , Nausicaa Clemente , Annalisa Chiocchetti , Filippo Martinelli Boneschi , Daniela Galimberti , Umberto Dianzani , Cristoforo Comi , Michele Mishto ,

Mapping the MHC Class I-Spliced Immunopeptidome of Cancer Cells.

Cancer immunology research

Avec: John Sidney , Felix K M Lorenz , Alessandro Sette , Michele Mishto

iBench: A ground truth approach for advanced validation of mass spectrometry identification method.

Proteomics

Avec: John A Cormican , Wai Tuck Soh , Michele Mishto ,

Potential Mimicry of Viral and Pancreatic β Cell Antigens Through Non-Spliced and

Frontiers in immunology

Avec: Michele Mishto , Artem Mansurkhodzhaev , Teresa Rodriguez-Calvo ,

Proteasome isoforms in human thymi and mouse models.

Immunology letters

Avec: Michele Mishto , Iina Takala , Paola Bonfanti ,

Identification of a class of non-conventional ER-stress-response-derived immunogenic peptides.

Cell reports

Avec: Alessia Melacarne , Valentina Ferrari , Luca Tiraboschi , Michele Mishto , Marina Aralla , Laura Marconato , Michela Lizier , Chiara Pozzi , Offer Zeira , Giuseppe Penna , Maria Rescigno

Proteasome-Generated

Frontiers in immunology

Avec: Artem Mansurkhodzhaev , Camila R R Barbosa , Michele Mishto ,

inSPIRE: An Open-Source Tool for Increased Mass Spectrometry Identification Rates Using Prosit Spectral Prediction.

Molecular & cellular proteomics : MCP

Avec: John A Cormican , Yehor Horokhovskyi , Wai Tuck Soh , Michele Mishto ,

Mammalian oocytes store proteins for the early embryo on cytoplasmic lattices.

Cell

Avec: Ida M A Jentoft , Felix J B Bäuerlein , Luisa M Welp , Benjamin H Cooper , Arsen Petrovic , Chun So , Sarah Mae Penir , Antonio Z Politi , Yehor Horokhovskyi , Iina Takala , Heike Eckel , Rüdiger Moltrecht , Peter Lénárt , Tommaso Cavazza , Nils Brose , Henning Urlaub , Rubén Fernández-Busnadiego , Melina Schuh

Large database for the analysis and prediction of spliced and non-spliced peptide generation by proteasomes.

Scientific data

Avec: Gerd Specht , Hanna P Roetschke , Artem Mansurkhodzhaev , Petra Henklein , Kathrin Textoris-Taube , Henning Urlaub , Michele Mishto ,

The maintenance of oocytes in the mammalian ovary involves extreme protein longevity.

Nature cell biology

Avec: Katarina Harasimov , Rebecca L Gorry , Luisa M Welp , Sarah Mae Penir , Yehor Horokhovskyi , Shiya Cheng , Katsuyoshi Takaoka , Alexandra Stützer , Ann-Sophie Frombach , Ana Lisa Taylor Tavares , Monika Raabe , Sara Haag , Debojit Saha , Katharina Grewe , Vera Schipper , Silvio O Rizzoli , Henning Urlaub , Melina Schuh

Proteolytic dynamics of human 20S thymoproteasome.

The Journal of biological chemistry

Avec: Ulrike Kuckelkorn , Sabine Stübler , Kathrin Textoris-Taube , Christiane Kilian , Agathe Niewienda , Petra Henklein , Katharina Janek , Michael P H Stumpf , Michele Mishto ,

ER-aminopeptidase 1 determines the processing and presentation of an immunotherapy-relevant melanoma epitope.

European journal of immunology

Avec: Kathrin Textoris-Taube , Clemens Cammann , Petra Henklein , Eylin Topfstedt , Frédéric Ebstein , Sarah Henze , Fang Zhao , Dirk Schadendorf , Burkhardt Dahlmann , Wolfgang Uckert , Annette Paschen , Michele Mishto , Ulrike Seifert

An

Frontiers in immunology

Avec: Michele Mishto , Artem Mansurkhodzhaev , Ge Ying , Aruna Bitra , Robert A Cordfunke , Sarah Henze , Debdas Paul , John Sidney , Henning Urlaub , Jacques Neefjes , Alessandro Sette , Dirk M Zajonc ,

Database search engines and target database features impinge upon the identification of post-translationally cis-spliced peptides in HLA class I immunopeptidomes.

Proteomics

Avec: Michele Mishto , Yehor Horokhovskyi , John A Cormican , Xiaoping Yang , Steven Lynham , Henning Urlaub ,

Protein degradation by human 20S proteasomes elucidates the interplay between peptide hydrolysis and splicing.

Nature communications

Avec: Wai Tuck Soh , Hanna P Roetschke , John A Cormican , Bei Fang Teo , Nyet Cheng Chiam , Monika Raabe , Ralf Pflanz , Fabian Henneberg , Stefan Becker , Ashwin Chari , Haiyan Liu , Henning Urlaub , Michele Mishto

Predicting the Success of Fmoc-Based Peptide Synthesis.

ACS omega

Avec: Ilanit Gutman , Ron Gutman , John Sidney , Leila Chihab , Michele Mishto , Anthony Chiem , Jason Greenbaum , Zhen Yan , Alessandro Sette , Zeynep Koşaloğlu-Yalçın , Bjoern Peters

InvitroSPI and a large database of proteasome-generated spliced and non-spliced peptides.

Scientific data

Avec: Hanna P Roetschke , Guillermo Rodriguez-Hernandez , John A Cormican , Xiaoping Yang , Steven Lynham , Michele Mishto ,

A roadmap for ribosome assembly in human mitochondria.

Nature structural & molecular biology

Avec: Elena Lavdovskaia , Elisa Hanitsch , Andreas Linden , Martin Pašen , Venkatapathi Challa , Yehor Horokhovskyi , Hanna P Roetschke , Franziska Nadler , Luisa Welp , Emely Steube , Marleen Heinrichs , Mandy Mong-Quyen Mai , Henning Urlaub , Ricarda Richter-Dennerlein

Chemical crosslinking extends and complements UV crosslinking in analysis of RNA/DNA nucleic acid-protein interaction sites by mass spectrometry.

bioRxiv : the preprint server for biology

Avec: Luisa M Welp , Timo Sachsenberg , Alexander Wulf , Aleksandar Chernev , Yehor Horokhovskyi , Piotr Neumann , Martin Pašen , Arslan Siraj , Monika Raabe , Sven Johannsson , Jana Schmitzova , Eugen Netz , Julianus Pfeuffer , Yi He , Kai Fritzemeier , Bernard Delanghe , Rosa Viner , Seychelle M Vos , Patrick Cramer , Ralf Ficner , Oliver Kohlbacher , Henning Urlaub

Réseau de co-auteurs

Michele Mishto 16 collaborations

Henning Urlaub 8 collaborations

Yehor Horokhovskyi 6 collaborations

John A Cormican 5 collaborations

Artem Mansurkhodzhaev 4 collaborations

Hanna P Roetschke 4 collaborations

John Sidney 3 collaborations

Alessandro Sette 3 collaborations

Wai Tuck Soh 3 collaborations

Luisa M Welp 3 collaborations

Petra Henklein 3 collaborations

Kathrin Textoris-Taube 3 collaborations

Monika Raabe 3 collaborations

Iina Takala 2 collaborations

Sarah Mae Penir 2 collaborations

Melina Schuh 2 collaborations

Sarah Henze 2 collaborations

Xiaoping Yang 2 collaborations

Steven Lynham 2 collaborations

Martin Pašen 2 collaborations

Chiara Dianzani 1 collaboration

Domizia Vecchio 1 collaboration

Nausicaa Clemente 1 collaboration

Annalisa Chiocchetti 1 collaboration

Filippo Martinelli Boneschi 1 collaboration

Daniela Galimberti 1 collaboration

Umberto Dianzani 1 collaboration

Cristoforo Comi 1 collaboration

Felix K M Lorenz 1 collaboration

Teresa Rodriguez-Calvo 1 collaboration

Paola Bonfanti 1 collaboration

Alessia Melacarne 1 collaboration

Valentina Ferrari 1 collaboration

Luca Tiraboschi 1 collaboration

Marina Aralla 1 collaboration

Laura Marconato 1 collaboration

Michela Lizier 1 collaboration

Chiara Pozzi 1 collaboration

Offer Zeira 1 collaboration

Giuseppe Penna 1 collaboration

Maria Rescigno 1 collaboration

Camila R R Barbosa 1 collaboration

Ida M A Jentoft 1 collaboration

Felix J B Bäuerlein 1 collaboration

Benjamin H Cooper 1 collaboration

Arsen Petrovic 1 collaboration

Chun So 1 collaboration

Antonio Z Politi 1 collaboration

Heike Eckel 1 collaboration

Rüdiger Moltrecht 1 collaboration

Peter Lénárt 1 collaboration

Tommaso Cavazza 1 collaboration

Nils Brose 1 collaboration

Rubén Fernández-Busnadiego 1 collaboration

Gerd Specht 1 collaboration

Katarina Harasimov 1 collaboration

Rebecca L Gorry 1 collaboration

Shiya Cheng 1 collaboration

Katsuyoshi Takaoka 1 collaboration

Alexandra Stützer 1 collaboration

Ann-Sophie Frombach 1 collaboration

Ana Lisa Taylor Tavares 1 collaboration

Sara Haag 1 collaboration

Debojit Saha 1 collaboration

Katharina Grewe 1 collaboration

Vera Schipper 1 collaboration

Silvio O Rizzoli 1 collaboration

Ulrike Kuckelkorn 1 collaboration

Sabine Stübler 1 collaboration

Christiane Kilian 1 collaboration

Agathe Niewienda 1 collaboration

Katharina Janek 1 collaboration

Michael P H Stumpf 1 collaboration

Clemens Cammann 1 collaboration

Eylin Topfstedt 1 collaboration

Frédéric Ebstein 1 collaboration

Fang Zhao 1 collaboration

Dirk Schadendorf 1 collaboration

Burkhardt Dahlmann 1 collaboration

Wolfgang Uckert 1 collaboration

Annette Paschen 1 collaboration

Ulrike Seifert 1 collaboration

Ge Ying 1 collaboration

Aruna Bitra 1 collaboration

Robert A Cordfunke 1 collaboration

Debdas Paul 1 collaboration

Jacques Neefjes 1 collaboration

Dirk M Zajonc 1 collaboration

Bei Fang Teo 1 collaboration

Nyet Cheng Chiam 1 collaboration

Ralf Pflanz 1 collaboration

Fabian Henneberg 1 collaboration

Stefan Becker 1 collaboration

Ashwin Chari 1 collaboration

Haiyan Liu 1 collaboration

Ilanit Gutman 1 collaboration

Ron Gutman 1 collaboration

Leila Chihab 1 collaboration

Anthony Chiem 1 collaboration

Jason Greenbaum 1 collaboration

Zhen Yan 1 collaboration

Zeynep Koşaloğlu-Yalçın 1 collaboration

Bjoern Peters 1 collaboration

Guillermo Rodriguez-Hernandez 1 collaboration

Elena Lavdovskaia 1 collaboration

Elisa Hanitsch 1 collaboration

Andreas Linden 1 collaboration

Venkatapathi Challa 1 collaboration

Franziska Nadler 1 collaboration

Luisa Welp 1 collaboration

Emely Steube 1 collaboration

Marleen Heinrichs 1 collaboration

Mandy Mong-Quyen Mai 1 collaboration

Ricarda Richter-Dennerlein 1 collaboration

Timo Sachsenberg 1 collaboration

Alexander Wulf 1 collaboration

Aleksandar Chernev 1 collaboration

Piotr Neumann 1 collaboration

Arslan Siraj 1 collaboration

Sven Johannsson 1 collaboration

Jana Schmitzova 1 collaboration

Eugen Netz 1 collaboration

Julianus Pfeuffer 1 collaboration

Yi He 1 collaboration

Kai Fritzemeier 1 collaboration

Bernard Delanghe 1 collaboration

Rosa Viner 1 collaboration

Seychelle M Vos 1 collaboration

Patrick Cramer 1 collaboration

Ralf Ficner 1 collaboration

Oliver Kohlbacher 1 collaboration