Ilya Belevich

Affiliations

Cell and Molecular Biology Program, University of Helsinki, FI-00014 Helsinki, Finland.
Electron Microscopy Unit, Institute of Biotechnology, University of Helsinki, FI-00014 Helsinki, Finland.

Publications (24)

REEP3 and REEP4 determine the tubular morphology of the endoplasmic reticulum during mitosis.

Molecular biology of the cell

Avec: Darshan Kumar , Banafsheh Golchoubian , Eija Jokitalo , Anne-Lore Schlaitz

Computational Tools for Serial Block Electron Microscopy Reveal Plasmodesmata Distributions and Wall Environments.

Plant physiology

Avec: Andrea Paterlini , Eija Jokitalo , Yrjö Helariutta

Specific inhibition of proton pumping by the T315V mutation in the K channel of cytochrome ba

Biochimica et biophysica acta. Bioenergetics

Avec: Sergey A Siletsky , Tewfik Soulimane , Robert B Gennis , Mårten Wikström

Dynamic microvilli sculpt bristles at nanometric scale.

Nature communications

Avec: Kyojiro N Ikeda , Luis Zelaya-Lainez , Lukas Orel , Josef Füssl , Jaromír Gumulec , Christian Hellmich , Eija Jokitalo , Florian Raible

Golgi organization is a determinant of stem cell function in the small intestine.

bioRxiv : the preprint server for biology

Avec: Sandra Scharaw , Agustin Sola-Carvajal , Anna T Webb , Srustidhar Das , Simon Andersson , Nalle Pentinmikko , Eduardo J Villablanca , James R Goldenring , Eija Jokitalo , Robert J Coffey , Pekka Katajisto

Assessment of the structural complexity of diffusion MRI voxels using 3D electron microscopy in the rat brain.

NeuroImage

Avec: Raimo A Salo , Eija Jokitalo , Olli Gröhn , Alejandra Sierra

DeepACSON automated segmentation of white matter in 3D electron microscopy.

Communications biology

Avec: Ali Abdollahzadeh , Eija Jokitalo , Alejandra Sierra , Jussi Tohka

Serial Block Electron Microscopy to Study Plasmodesmata in the Vasculature of Arabidopsis thaliana Roots.

Methods in molecular biology (Clifton, N.J.)

Avec: Andrea Paterlini ,

A Hitchhiker's guide through the bio-image analysis software universe.

FEBS letters

Avec: Robert Haase , Elnaz Fazeli , David Legland , Michael Doube , Siân Culley , Eija Jokitalo , Martin Schorb , Anna Klemm , Christian Tischer

Mitochondria Permeability Transition versus Necroptosis in Oxalate-Induced AKI.

Journal of the American Society of Nephrology : JASN

Avec: Shrikant Ramesh Mulay , Mohsen M Honarpisheh , Orestes Foresto-Neto , Chongxu Shi , Jyaysi Desai , Zhi Bo Zhao , Julian A Marschner , Bastian Popper , Ewa Miriam Buhl , Peter Boor , Andreas Linkermann , Helen Liapis , Rostyslav Bilyy , Martin Herrmann , Paola Romagnani , Eija Jokitalo , Jan U Becker , Hans-Joachim Anders

Seipin Facilitates Triglyceride Flow to Lipid Droplet and Counteracts Droplet Ripening via Endoplasmic Reticulum Contact.

Developmental cell

Avec: Veijo T Salo , Shiqian Li , Helena Vihinen , Maarit Hölttä-Vuori , Abel Szkalisity , Peter Horvath , Johan Peränen , Christoph Thiele , Pentti Somerharju , Hongxia Zhao , Alexandre Santinho , Abdou Rachid Thiam , Eija Jokitalo , Elina Ikonen

Sphingolipid biosynthesis modulates plasmodesmal ultrastructure and phloem unloading.

Nature plants

Avec: Dawei Yan , Shri Ram Yadav , Andrea Paterlini , William J Nicolas , Jules D Petit , Lysiane Brocard , Magali S Grison , Anne Vaten , Leila Karami , Sedeer El-Showk , Jung-Youn Lee , Gosia M Murawska , Jenny Mortimer , Michael Knoblauch , Eija Jokitalo , Jennifer E Markham , Emmanuelle M Bayer , Ykä Helariutta

Cell Volume (3D) Correlative Microscopy Facilitated by Intracellular Fluorescent Nanodiamonds as Multi-Modal Probes.

Nanomaterials (Basel, Switzerland)

Avec: Neeraj Prabhakar , Markus Peurla , Xavier Heiligenstein , Huan-Cheng Chang , Cecilia Sahlgren , Eija Jokitalo , Jessica M Rosenholm

DeepMIB: User-friendly and open-source software for training of deep learning network for biological image segmentation.

PLoS computational biology

Avec: Eija Jokitalo

Putative pectate lyase PLL12 and callose deposition through polar CALS7 are necessary for long-distance phloem transport in Arabidopsis.

Current biology : CB

Avec: Lothar Kalmbach , Matthieu Bourdon , Josip Safran , Adrien Lemaire , Jung-Ok Heo , Sofia Otero , Bernhard Blob , Jérôme Pelloux , Eija Jokitalo , Ykä Helariutta

Automated 3D Axonal Morphometry of White Matter.

Scientific reports

Avec: Ali Abdollahzadeh , Eija Jokitalo , Jussi Tohka , Alejandra Sierra

Seipin localizes at endoplasmic-reticulum-mitochondria contact sites to control mitochondrial calcium import and metabolism in adipocytes.

Cell reports

Avec: Yoann Combot , Veijo T Salo , Gilliane Chadeuf , Maarit Hölttä , Katharina Ven , Ilari Pulli , Simon Ducheix , Claire Pecqueur , Ophélie Renoult , Behnam Lak , Shiqian Li , Leena Karhinen , Cedric Le May , Jennifer Rieusset , Soazig Le Lay , Mikael Croyal , Karim Si Tayeb , Helena Vihinen , Eija Jokitalo , Kid Törnquist , Corinne Vigouroux , Bertrand Cariou , Jocelyne Magré , Abdelhalim Larhlimi , Elina Ikonen , Xavier Prieur

Code-Free Development and Deployment of Deep Segmentation Models for Digital Pathology.

Frontiers in medicine

Avec: Henrik Sahlin Pettersen , Elin Synnøve Røyset , Erik Smistad , Melanie Rae Simpson , Eija Jokitalo , Ingerid Reinertsen , Ingunn Bakke , André Pedersen

Progression of herpesvirus infection remodels mitochondrial organization and metabolism.

PLoS pathogens

Avec: Simon Leclerc , Alka Gupta , Visa Ruokolainen , Jian-Hua Chen , Kari Kunnas , Axel A Ekman , Henri Niskanen , Helena Vihinen , Paula Turkki , Ana J Perez-Berna , Sergey Kapishnikov , Elina Mäntylä , Maria Harkiolaki , Eric Dufour , Vesa Hytönen , Eva Pereiro , Tony McEnroe , Kenneth Fahy , Minna U Kaikkonen , Eija Jokitalo , Carolyn A Larabell , Venera Weinhardt , Salla Mattola , Vesa Aho , Maija Vihinen-Ranta

Publisher Correction: Sphingolipid biosynthesis modulates plasmodesmal ultrastructure and phloem unloading.

Nature plants

MANF Is Required for the Postnatal Expansion and Maintenance of Pancreatic β-Cell Mass in Mice.

Diabetes

Avec: Tatiana Danilova , Huini Li , Erik Palm , Eija Jokitalo , Timo Otonkoski , Maria Lindahl

RTN4B interacting protein FAM134C promotes ER membrane curvature and has a functional role in autophagy.

Molecular biology of the cell

Avec: Darshan Kumar , Behnam Lak , Taina Suntio , Helena Vihinen , Tiina Viita , Liu Xiaonan , Aki Vartiainen , Maria Vartiainen , Markku Varjosalo , Eija Jokitalo

gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy.

Computer methods and programs in biomedicine

Avec: Andrea Behanova , Ali Abdollahzadeh , Eija Jokitalo , Alejandra Sierra , Jussi Tohka

Evaluation of BH3 mimetics as a combination therapy with irradiation in head and neck squamous cell carcinoma.

Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie

Avec: Katja Korelin , Mayke Oostveen , Wafa Wahbi , Filipp Ianevski , Bruno Cavalcante , Laura Turunen , Ahmed Al-Samadi , Tuula Salo

Réseau de co-auteurs

Eija Jokitalo 21 collaborations

Andrea Paterlini 4 collaborations

Alejandra Sierra 4 collaborations

Helena Vihinen 4 collaborations

Ali Abdollahzadeh 3 collaborations

Jussi Tohka 3 collaborations

Ykä Helariutta 3 collaborations

Darshan Kumar 2 collaborations

Veijo T Salo 2 collaborations

Shiqian Li 2 collaborations

Elina Ikonen 2 collaborations

Dawei Yan 2 collaborations

Shri Ram Yadav 2 collaborations

William J Nicolas 2 collaborations

Jules D Petit 2 collaborations

Lysiane Brocard 2 collaborations

Magali S Grison 2 collaborations

Anne Vaten 2 collaborations

Leila Karami 2 collaborations

Sedeer El-Showk 2 collaborations

Jung-Youn Lee 2 collaborations

Gosia M Murawska 2 collaborations

Jenny Mortimer 2 collaborations

Michael Knoblauch 2 collaborations

Jennifer E Markham 2 collaborations

Emmanuelle M Bayer 2 collaborations

Behnam Lak 2 collaborations

Banafsheh Golchoubian 1 collaboration

Anne-Lore Schlaitz 1 collaboration

Yrjö Helariutta 1 collaboration

Sergey A Siletsky 1 collaboration

Tewfik Soulimane 1 collaboration

Robert B Gennis 1 collaboration

Mårten Wikström 1 collaboration

Kyojiro N Ikeda 1 collaboration

Luis Zelaya-Lainez 1 collaboration

Lukas Orel 1 collaboration

Josef Füssl 1 collaboration

Jaromír Gumulec 1 collaboration

Christian Hellmich 1 collaboration

Florian Raible 1 collaboration

Sandra Scharaw 1 collaboration

Agustin Sola-Carvajal 1 collaboration

Anna T Webb 1 collaboration

Srustidhar Das 1 collaboration

Simon Andersson 1 collaboration

Nalle Pentinmikko 1 collaboration

Eduardo J Villablanca 1 collaboration

James R Goldenring 1 collaboration

Robert J Coffey 1 collaboration

Pekka Katajisto 1 collaboration

Raimo A Salo 1 collaboration

Olli Gröhn 1 collaboration

Robert Haase 1 collaboration

Elnaz Fazeli 1 collaboration

David Legland 1 collaboration

Michael Doube 1 collaboration

Siân Culley 1 collaboration

Martin Schorb 1 collaboration

Anna Klemm 1 collaboration

Christian Tischer 1 collaboration

Shrikant Ramesh Mulay 1 collaboration

Mohsen M Honarpisheh 1 collaboration

Orestes Foresto-Neto 1 collaboration

Chongxu Shi 1 collaboration

Jyaysi Desai 1 collaboration

Zhi Bo Zhao 1 collaboration

Julian A Marschner 1 collaboration

Bastian Popper 1 collaboration

Ewa Miriam Buhl 1 collaboration

Peter Boor 1 collaboration

Andreas Linkermann 1 collaboration

Helen Liapis 1 collaboration

Rostyslav Bilyy 1 collaboration

Martin Herrmann 1 collaboration

Paola Romagnani 1 collaboration

Jan U Becker 1 collaboration

Hans-Joachim Anders 1 collaboration

Maarit Hölttä-Vuori 1 collaboration

Abel Szkalisity 1 collaboration

Peter Horvath 1 collaboration

Johan Peränen 1 collaboration

Christoph Thiele 1 collaboration

Pentti Somerharju 1 collaboration

Hongxia Zhao 1 collaboration

Alexandre Santinho 1 collaboration

Abdou Rachid Thiam 1 collaboration

Neeraj Prabhakar 1 collaboration

Markus Peurla 1 collaboration

Xavier Heiligenstein 1 collaboration

Huan-Cheng Chang 1 collaboration

Cecilia Sahlgren 1 collaboration

Jessica M Rosenholm 1 collaboration

Lothar Kalmbach 1 collaboration

Matthieu Bourdon 1 collaboration

Josip Safran 1 collaboration

Adrien Lemaire 1 collaboration

Jung-Ok Heo 1 collaboration

Sofia Otero 1 collaboration

Bernhard Blob 1 collaboration

Jérôme Pelloux 1 collaboration

Yoann Combot 1 collaboration

Gilliane Chadeuf 1 collaboration

Maarit Hölttä 1 collaboration

Katharina Ven 1 collaboration

Ilari Pulli 1 collaboration

Simon Ducheix 1 collaboration

Claire Pecqueur 1 collaboration

Ophélie Renoult 1 collaboration

Leena Karhinen 1 collaboration

Cedric Le May 1 collaboration

Jennifer Rieusset 1 collaboration

Soazig Le Lay 1 collaboration

Mikael Croyal 1 collaboration

Karim Si Tayeb 1 collaboration

Kid Törnquist 1 collaboration

Corinne Vigouroux 1 collaboration

Bertrand Cariou 1 collaboration

Jocelyne Magré 1 collaboration

Abdelhalim Larhlimi 1 collaboration

Xavier Prieur 1 collaboration

Henrik Sahlin Pettersen 1 collaboration

Elin Synnøve Røyset 1 collaboration

Erik Smistad 1 collaboration

Melanie Rae Simpson 1 collaboration

Ingerid Reinertsen 1 collaboration

Ingunn Bakke 1 collaboration

André Pedersen 1 collaboration

Simon Leclerc 1 collaboration

Alka Gupta 1 collaboration

Visa Ruokolainen 1 collaboration

Jian-Hua Chen 1 collaboration

Kari Kunnas 1 collaboration

Axel A Ekman 1 collaboration

Henri Niskanen 1 collaboration

Paula Turkki 1 collaboration

Ana J Perez-Berna 1 collaboration

Sergey Kapishnikov 1 collaboration

Elina Mäntylä 1 collaboration

Maria Harkiolaki 1 collaboration

Eric Dufour 1 collaboration

Vesa Hytönen 1 collaboration

Eva Pereiro 1 collaboration

Tony McEnroe 1 collaboration

Kenneth Fahy 1 collaboration

Minna U Kaikkonen 1 collaboration

Carolyn A Larabell 1 collaboration

Venera Weinhardt 1 collaboration

Salla Mattola 1 collaboration

Vesa Aho 1 collaboration

Maija Vihinen-Ranta 1 collaboration

Tatiana Danilova 1 collaboration

Huini Li 1 collaboration

Erik Palm 1 collaboration

Timo Otonkoski 1 collaboration

Maria Lindahl 1 collaboration

Taina Suntio 1 collaboration

Tiina Viita 1 collaboration

Liu Xiaonan 1 collaboration

Aki Vartiainen 1 collaboration

Maria Vartiainen 1 collaboration

Markku Varjosalo 1 collaboration

Andrea Behanova 1 collaboration

Katja Korelin 1 collaboration

Mayke Oostveen 1 collaboration

Wafa Wahbi 1 collaboration

Filipp Ianevski 1 collaboration

Bruno Cavalcante 1 collaboration

Laura Turunen 1 collaboration

Ahmed Al-Samadi 1 collaboration

Tuula Salo 1 collaboration