Gerton Lunter

Affiliations

Department of Epidemiology, University Medical Center Groningen, University of Groningen, the Netherlands.

Publications (22)

Recurrence and survival after laparoscopy versus laparotomy without lymphadenectomy in early-stage endometrial cancer: Long-term outcomes of a randomised trial.

Gynecologic oncology

Avec: Bianca Reijntjes , Mieke van Suijlichem , Jorien M Woolderink , Marlies Y Bongers , Nathalie Reesink-Peters , Lasse Paulsen , Pieter J van der Hurk , Arjan A Kraayenbrink , Mirjam J A Apperloo , Brigitte Slangen , Tineke Schukken , Fokkedien H M P Tummers , Paul J M van Kesteren , Judith A F Huirne , Dieuwke Boskamp , Geertruida H de Bock , Marian J E Mourits

DeepC: predicting 3D genome folding using megabase-scale transfer learning.

Nature methods

Avec: Ron Schwessinger , Matthew Gosden , Damien Downes , Richard C Brown , A Marieke Oudelaar , Jelena Telenius , Yee Whye Teh , Jim R Hughes

Demographic inference from multiple whole genomes using a particle filter for continuous Markov jump processes.

PloS one

Avec: Donna Henderson , Sha Joe Zhu , Christopher B Cole ,

Genetic association studies in critically ill patients: protocol for a systematic review.

Systematic reviews

Avec: Eline G M Cox , Wenbo Zhang , Peter H J van der Voort , Frederik Keus , Harold Snieder

Timely referral for device-aided therapy in Parkinson's disease. Development of a screening tool.

Parkinsonism & related disorders

Avec: Harmen R Moes , Jolien M Ten Kate , Axel T Portman , Barbera van Harten , Mirjam E van Kesteren , Tjeerd Mondria , Erik Buskens , Teus van Laar

Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization.

Computational statistics

Avec: Donna Henderson ,

Inferring B cell specificity for vaccines using a Bayesian mixture model.

BMC genomics

Avec: Anna Fowler , Jacob D Galson , Johannes Trück , Dominic F Kelly ,

Unsupervised learning for medical data: A review of probabilistic factorization methods.

Statistics in medicine

Avec: Dorien Neijzen ,

Haplotype matching in large cohorts using the Li and Stephens model.

Bioinformatics (Oxford, England)

Avec:

Multi Locus View: an extensible web-based tool for the analysis of genomic data.

Communications biology

Avec: Martin J Sergeant , Jim R Hughes , Lance Hentges , Damien J Downes , Stephen Taylor

Short and long-read genome sequencing methodologies for somatic variant detection; genomic analysis of a patient with diffuse large B-cell lymphoma.

Scientific reports

Avec: Hannah E Roberts , Maria Lopopolo , Alistair T Pagnamenta , Eshita Sharma , Duncan Parkes , Lorne Lonie , Colin Freeman , Samantha J L Knight , Helene Dreau , Helen Lockstone , Jenny C Taylor , Anna Schuh , Rory Bowden , David Buck

Respiratory Syncytial Virus, Human Metapneumovirus, and Parainfluenza Virus Infections in Lung Transplant Recipients: A Systematic Review of Outcomes and Treatment Strategies.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Auke de Zwart , Annelies Riezebos-Brilman , Judith Vonk , Allan R Glanville , Jens Gottlieb , Nitipong Permpalung , Huib Kerstjens , Jan-Willem Alffenaar , Erik Verschuuren

A unified haplotype-based method for accurate and comprehensive variant calling.

Nature biotechnology

Avec: Daniel P Cooke , David C Wedge ,

Neuropeptide S receptor 1 is a nonhormonal treatment target in endometriosis.

Science translational medicine

Avec: Thomas T Tapmeier , Nilufer Rahmioglu , Jianghai Lin , Bianca De Leo , Maik Obendorf , Muthuswamy Raveendran , Oliver M Fischer , Cemsel Bafligil , Manman Guo , Ronald Alan Harris , Holger Hess-Stumpp , Alexis Laux-Biehlmann , Ernesto Lowy , Jessica Malzahn , Nicholas G Martin , Fernando O Martinez , Sanjiv Manek , Stefanie Mesch , Grant W Montgomery , Andrew P Morris , Jens Nagel , Heather A Simmons , Denise Brocklebank , Catherine Shang , Susan Treloar , Graham Wells , Christian M Becker , Udo Oppermann , Thomas M Zollner , Stephen H Kennedy , Joseph W Kemnitz , Jeffrey Rogers , Krina T Zondervan

Sequencing of human genomes with nanopore technology.

Nature communications

Avec: Rory Bowden , Robert W Davies , Andreas Heger , Alistair T Pagnamenta , Mariateresa de Cesare , Laura E Oikkonen , Duncan Parkes , Colin Freeman , Fatima Dhalla , Smita Y Patel , Niko Popitsch , Camilla L C Ip , Hannah E Roberts , Silvia Salatino , Helen Lockstone , Jenny C Taylor , David Buck , Michael A Simpson , Peter Donnelly

Repertoire-wide phylogenetic models of B cell molecular evolution reveal evolutionary signatures of aging and vaccination.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Kenneth B Hoehn , Jason A Vander Heiden , Julian Q Zhou , Oliver G Pybus , Steven H Kleinstein

An equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs.

Bioinformatics (Oxford, England)

Avec: Richard C Brown ,

Benchmarking small-variant genotyping in polyploids.

Genome research

Avec: Daniel P Cooke , David C Wedge ,

Topic modeling identifies novel genetic loci associated with multimorbidities in UK Biobank.

Cell genomics

Avec: Yidong Zhang , Xilin Jiang , Alexander J Mentzer , Gil McVean ,

Lifestyle factors related to prevalent chronic disease multimorbidity: A population-based cross-sectional study.

PloS one

Avec: Jacobien Niebuur , Judith M Vonk , Yihui Du , Geertruida H de Bock , Paul F M Krabbe , Behrooz Z Alizadeh , Harold Snieder , Nynke Smidt , Marike Boezen , Eva Corpeleijn

Structural and non-coding variants increase the diagnostic yield of clinical whole genome sequencing for rare diseases.

Genome medicine

Avec: Alistair T Pagnamenta , Carme Camps , Edoardo Giacopuzzi , John M Taylor , Mona Hashim , Eduardo Calpena , Pamela J Kaisaki , Akiko Hashimoto , Jing Yu , Edward Sanders , Ron Schwessinger , Jim R Hughes , Helene Dreau , Matteo Ferla , Lukas Lange , Yesim Kesim , Vassilis Ragoussis , Dimitrios V Vavoulis , Holger Allroggen , Olaf Ansorge , Christian Babbs , Siddharth Banka , Benito Baños-Piñero , David Beeson , Tal Ben-Ami , David L Bennett , Celeste Bento , Edward Blair , Charlotte Brasch-Andersen , Katherine R Bull , Holger Cario , Deirdre Cilliers , Valerio Conti , E Graham Davies , Fatima Dhalla , Beatriz Diez Dacal , Yin Dong , James E Dunford , Renzo Guerrini , Adrian L Harris , Jane Hartley , Georg Hollander , Kassim Javaid , Maureen Kane , Deirdre Kelly , Dominic Kelly , Samantha J L Knight , Alexandra Y Kreins , Erika M Kvikstad , Craig B Langman , Tracy Lester , Kate E Lines , Simon R Lord , Xin Lu , Sahar Mansour , Adnan Manzur , Reza Maroofian , Brian Marsden , Joanne Mason , Simon J McGowan , Davide Mei , Hana Mlcochova , Yoshiko Murakami , Andrea H Németh , Steven Okoli , Elizabeth Ormondroyd , Lilian Bomme Ousager , Jacqueline Palace , Smita Y Patel , Melissa M Pentony , Chris Pugh , Aboulfazl Rad , Archana Ramesh , Simone G Riva , Irene Roberts , Noémi Roy , Outi Salminen , Kyleen D Schilling , Caroline Scott , Arjune Sen , Conrad Smith , Mark Stevenson , Rajesh V Thakker , Stephen R F Twigg , Holm H Uhlig , Richard van Wijk , Barbara Vona , Steven Wall , Jing Wang , Hugh Watkins , Jaroslav Zak , Anna H Schuh , Usha Kini , Andrew O M Wilkie , Niko Popitsch , Jenny C Taylor

Indels: computational methods, evolutionary dynamics, and biological applications.

Molecular biology and evolution

Avec: Benjamin D Redelings , Ian Holmes , Tal Pupko , Maria Anisimova

Réseau de co-auteurs

Jim R Hughes 3 collaborations

Alistair T Pagnamenta 3 collaborations

Jenny C Taylor 3 collaborations

Geertruida H de Bock 2 collaborations

Ron Schwessinger 2 collaborations

Richard C Brown 2 collaborations

Donna Henderson 2 collaborations

Harold Snieder 2 collaborations

Hannah E Roberts 2 collaborations

Duncan Parkes 2 collaborations

Colin Freeman 2 collaborations

Samantha J L Knight 2 collaborations

Helene Dreau 2 collaborations

Helen Lockstone 2 collaborations

Rory Bowden 2 collaborations

David Buck 2 collaborations

Daniel P Cooke 2 collaborations

David C Wedge 2 collaborations

Fatima Dhalla 2 collaborations

Smita Y Patel 2 collaborations

Niko Popitsch 2 collaborations

Bianca Reijntjes 1 collaboration

Mieke van Suijlichem 1 collaboration

Jorien M Woolderink 1 collaboration

Marlies Y Bongers 1 collaboration

Nathalie Reesink-Peters 1 collaboration

Lasse Paulsen 1 collaboration

Pieter J van der Hurk 1 collaboration

Arjan A Kraayenbrink 1 collaboration

Mirjam J A Apperloo 1 collaboration

Brigitte Slangen 1 collaboration

Tineke Schukken 1 collaboration

Fokkedien H M P Tummers 1 collaboration

Paul J M van Kesteren 1 collaboration

Judith A F Huirne 1 collaboration

Dieuwke Boskamp 1 collaboration

Marian J E Mourits 1 collaboration

Matthew Gosden 1 collaboration

Damien Downes 1 collaboration

A Marieke Oudelaar 1 collaboration

Jelena Telenius 1 collaboration

Yee Whye Teh 1 collaboration

Sha Joe Zhu 1 collaboration

Christopher B Cole 1 collaboration

Eline G M Cox 1 collaboration

Wenbo Zhang 1 collaboration

Peter H J van der Voort 1 collaboration

Frederik Keus 1 collaboration

Harmen R Moes 1 collaboration

Jolien M Ten Kate 1 collaboration

Axel T Portman 1 collaboration

Barbera van Harten 1 collaboration

Mirjam E van Kesteren 1 collaboration

Tjeerd Mondria 1 collaboration

Erik Buskens 1 collaboration

Teus van Laar 1 collaboration

Anna Fowler 1 collaboration

Jacob D Galson 1 collaboration

Johannes Trück 1 collaboration

Dominic F Kelly 1 collaboration

Dorien Neijzen 1 collaboration

Martin J Sergeant 1 collaboration

Lance Hentges 1 collaboration

Damien J Downes 1 collaboration

Stephen Taylor 1 collaboration

Maria Lopopolo 1 collaboration

Eshita Sharma 1 collaboration

Lorne Lonie 1 collaboration

Anna Schuh 1 collaboration

Auke de Zwart 1 collaboration

Annelies Riezebos-Brilman 1 collaboration

Judith Vonk 1 collaboration

Allan R Glanville 1 collaboration

Jens Gottlieb 1 collaboration

Nitipong Permpalung 1 collaboration

Huib Kerstjens 1 collaboration

Jan-Willem Alffenaar 1 collaboration

Erik Verschuuren 1 collaboration

Thomas T Tapmeier 1 collaboration

Nilufer Rahmioglu 1 collaboration

Jianghai Lin 1 collaboration

Bianca De Leo 1 collaboration

Maik Obendorf 1 collaboration

Muthuswamy Raveendran 1 collaboration

Oliver M Fischer 1 collaboration

Cemsel Bafligil 1 collaboration

Manman Guo 1 collaboration

Ronald Alan Harris 1 collaboration

Holger Hess-Stumpp 1 collaboration

Alexis Laux-Biehlmann 1 collaboration

Ernesto Lowy 1 collaboration

Jessica Malzahn 1 collaboration

Nicholas G Martin 1 collaboration

Fernando O Martinez 1 collaboration

Sanjiv Manek 1 collaboration

Stefanie Mesch 1 collaboration

Grant W Montgomery 1 collaboration

Andrew P Morris 1 collaboration

Jens Nagel 1 collaboration

Heather A Simmons 1 collaboration

Denise Brocklebank 1 collaboration

Catherine Shang 1 collaboration

Susan Treloar 1 collaboration

Graham Wells 1 collaboration

Christian M Becker 1 collaboration

Udo Oppermann 1 collaboration

Thomas M Zollner 1 collaboration

Stephen H Kennedy 1 collaboration

Joseph W Kemnitz 1 collaboration

Jeffrey Rogers 1 collaboration

Krina T Zondervan 1 collaboration

Robert W Davies 1 collaboration

Andreas Heger 1 collaboration

Mariateresa de Cesare 1 collaboration

Laura E Oikkonen 1 collaboration

Camilla L C Ip 1 collaboration

Silvia Salatino 1 collaboration

Michael A Simpson 1 collaboration

Peter Donnelly 1 collaboration

Kenneth B Hoehn 1 collaboration

Jason A Vander Heiden 1 collaboration

Julian Q Zhou 1 collaboration

Oliver G Pybus 1 collaboration

Steven H Kleinstein 1 collaboration

Yidong Zhang 1 collaboration

Xilin Jiang 1 collaboration

Alexander J Mentzer 1 collaboration

Gil McVean 1 collaboration

Jacobien Niebuur 1 collaboration

Judith M Vonk 1 collaboration

Yihui Du 1 collaboration

Paul F M Krabbe 1 collaboration

Behrooz Z Alizadeh 1 collaboration

Nynke Smidt 1 collaboration

Marike Boezen 1 collaboration

Eva Corpeleijn 1 collaboration

Carme Camps 1 collaboration

Edoardo Giacopuzzi 1 collaboration

John M Taylor 1 collaboration

Mona Hashim 1 collaboration

Eduardo Calpena 1 collaboration

Pamela J Kaisaki 1 collaboration

Akiko Hashimoto 1 collaboration

Jing Yu 1 collaboration

Edward Sanders 1 collaboration

Matteo Ferla 1 collaboration

Lukas Lange 1 collaboration

Yesim Kesim 1 collaboration

Vassilis Ragoussis 1 collaboration

Dimitrios V Vavoulis 1 collaboration

Holger Allroggen 1 collaboration

Olaf Ansorge 1 collaboration

Christian Babbs 1 collaboration

Siddharth Banka 1 collaboration

Benito Baños-Piñero 1 collaboration

David Beeson 1 collaboration

Tal Ben-Ami 1 collaboration

David L Bennett 1 collaboration

Celeste Bento 1 collaboration

Edward Blair 1 collaboration

Charlotte Brasch-Andersen 1 collaboration

Katherine R Bull 1 collaboration

Holger Cario 1 collaboration

Deirdre Cilliers 1 collaboration

Valerio Conti 1 collaboration

E Graham Davies 1 collaboration

Beatriz Diez Dacal 1 collaboration

Yin Dong 1 collaboration

James E Dunford 1 collaboration

Renzo Guerrini 1 collaboration

Adrian L Harris 1 collaboration

Jane Hartley 1 collaboration

Georg Hollander 1 collaboration

Kassim Javaid 1 collaboration

Maureen Kane 1 collaboration

Deirdre Kelly 1 collaboration

Dominic Kelly 1 collaboration

Alexandra Y Kreins 1 collaboration

Erika M Kvikstad 1 collaboration

Craig B Langman 1 collaboration

Tracy Lester 1 collaboration

Kate E Lines 1 collaboration

Simon R Lord 1 collaboration

Xin Lu 1 collaboration

Sahar Mansour 1 collaboration

Adnan Manzur 1 collaboration

Reza Maroofian 1 collaboration

Brian Marsden 1 collaboration

Joanne Mason 1 collaboration

Simon J McGowan 1 collaboration

Davide Mei 1 collaboration

Hana Mlcochova 1 collaboration

Yoshiko Murakami 1 collaboration

Andrea H Németh 1 collaboration

Steven Okoli 1 collaboration

Elizabeth Ormondroyd 1 collaboration

Lilian Bomme Ousager 1 collaboration

Jacqueline Palace 1 collaboration

Melissa M Pentony 1 collaboration

Chris Pugh 1 collaboration

Aboulfazl Rad 1 collaboration

Archana Ramesh 1 collaboration

Simone G Riva 1 collaboration

Irene Roberts 1 collaboration

Noémi Roy 1 collaboration

Outi Salminen 1 collaboration

Kyleen D Schilling 1 collaboration

Caroline Scott 1 collaboration

Arjune Sen 1 collaboration

Conrad Smith 1 collaboration

Mark Stevenson 1 collaboration

Rajesh V Thakker 1 collaboration

Stephen R F Twigg 1 collaboration

Holm H Uhlig 1 collaboration

Richard van Wijk 1 collaboration

Barbara Vona 1 collaboration

Steven Wall 1 collaboration

Jing Wang 1 collaboration

Hugh Watkins 1 collaboration

Jaroslav Zak 1 collaboration

Anna H Schuh 1 collaboration

Usha Kini 1 collaboration

Andrew O M Wilkie 1 collaboration

Benjamin D Redelings 1 collaboration

Ian Holmes 1 collaboration

Tal Pupko 1 collaboration

Maria Anisimova 1 collaboration