Dmitry Leshchiner

Affiliations

Department of Biology, Boston College, Chestnut Hill, MA, USA.

Publications (10)

CRISPRi-TnSeq maps genome-wide interactions between essential and non-essential genes in bacteria.

Nature microbiology

Avec: Bimal Jana , Xue Liu , Julien Dénéréaz , Hongshik Park , Bruce Liu , Clément Gallay , Junhao Zhu , Jan-Willem Veening , Tim van Opijnen

Downregulation of the tyrosine degradation pathway extends

eLife

Avec: Andrey A Parkhitko , Divya Ramesh , Lin Wang , Elizabeth Filine , Richard Binari , Abby L Olsen , John M Asara , Valentin Cracan , Joshua D Rabinowitz , Axel Brockmann , Norbert Perrimon

A genetic model of methionine restriction extends

Proceedings of the National Academy of Sciences of the United States of America

Avec: Andrey A Parkhitko , Lin Wang , Elizabeth Filine , Patrick Jouandin , Richard Binari , John M Asara , Joshua D Rabinowitz , Norbert Perrimon

CRISPRi-TnSeq: A genome-wide high-throughput tool for bacterial essential-nonessential genetic interaction mapping.

bioRxiv : the preprint server for biology

Avec: Bimal Jana , Xue Liu , Julien Dénéréaz , Hongshik Park , Bruce Liu , Clément Gallay , Jan-Willem Veening , Tim van Opijnen

Sample Preparation and Differential Gene Expression Analysis of Human Cancer Cell Lines by RNA Sequencing.

Methods in molecular biology (Clifton, N.J.)

Avec: Tommy V Vo , Sachi Horibata

Comparison of Prompt Engineering and Fine-Tuning Strategies in Large Language Models in the Classification of Clinical Notes.

medRxiv : the preprint server for health sciences

Avec: Xiaodan Zhang , Nabasmita Talukdar , Sandeep Vemulapalli , Sumyeong Ahn , Jiankun Wang , Han Meng , Sardar Mehtab Bin Murtaza , Aakash Ajay Dave , Dimitri F Joseph , Martin Witteveen-Lane , Dave Chesla , Jiayu Zhou , Bin Chen

Comparison of Prompt Engineering and Fine-Tuning Strategies in Large Language Models in the Classification of Clinical Notes.

AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science

Avec: Xiaodan Zhang , Nabasmita Talukdar , Sandeep Vemulapalli , Sumyeong Ahn , Jiankun Wang , Han Meng , Sardar Mehtab Bin Murtaza , Aakash Ajay Dave , Dimitri F Joseph , Martin Witteveen-Lane , Dave Chesla , Jiayu Zhou , Bin Chen

High-throughput fitness experiments reveal specific vulnerabilities of human-adapted Salmonella during stress and infection.

Nature genetics

Avec: Benjamin X Wang , Lijuan Luo , Miles Tuncel , Karsten Hokamp , Jay C D Hinton , Denise M Monack

A genome-wide atlas of antibiotic susceptibility targets and pathways to tolerance.

Nature communications

Avec: Federico Rosconi , Bharathi Sundaresh , Emily Rudmann , Luisa Maria Nieto Ramirez , Andrew T Nishimoto , Stephen J Wood , Bimal Jana , Noemí Buján , Kaicheng Li , Jianmin Gao , Matthew Frank , Stephanie M Reeve , Richard E Lee , Charles O Rock , Jason W Rosch , Tim van Opijnen

Differential Transcriptomic Signatures of Small Airway Cell Cultures Derived from IPF and COVID-19-Induced Exacerbation of Interstitial Lung Disease.

Cells

Avec: Katie Uhl , Shreya Paithankar , Tara E Jager , Mohamed Abdelgied , Bhavna Dixit , Raya Marashdeh , Dewen Luo-Li , Kaylie Tripp , Angela M Peraino , Maximiliano Tamae Kakazu , Cameron Lawson , Dave W Chesla , Ningzhi Luo-Li , Edward T Murphy , Jeremy Prokop , Bin Chen , Reda E Girgis , Xiaopeng Li

Réseau de co-auteurs

Bimal Jana 3 collaborations

Tim van Opijnen 3 collaborations

Bin Chen 3 collaborations

Xue Liu 2 collaborations

Julien Dénéréaz 2 collaborations

Hongshik Park 2 collaborations

Bruce Liu 2 collaborations

Clément Gallay 2 collaborations

Jan-Willem Veening 2 collaborations

Andrey A Parkhitko 2 collaborations

Lin Wang 2 collaborations

Elizabeth Filine 2 collaborations

Richard Binari 2 collaborations

John M Asara 2 collaborations

Joshua D Rabinowitz 2 collaborations

Norbert Perrimon 2 collaborations

Xiaodan Zhang 2 collaborations

Nabasmita Talukdar 2 collaborations

Sandeep Vemulapalli 2 collaborations

Sumyeong Ahn 2 collaborations

Jiankun Wang 2 collaborations

Han Meng 2 collaborations

Sardar Mehtab Bin Murtaza 2 collaborations

Aakash Ajay Dave 2 collaborations

Dimitri F Joseph 2 collaborations

Martin Witteveen-Lane 2 collaborations

Dave Chesla 2 collaborations

Jiayu Zhou 2 collaborations

Junhao Zhu 1 collaboration

Divya Ramesh 1 collaboration

Abby L Olsen 1 collaboration

Valentin Cracan 1 collaboration

Axel Brockmann 1 collaboration

Patrick Jouandin 1 collaboration

Tommy V Vo 1 collaboration

Sachi Horibata 1 collaboration

Benjamin X Wang 1 collaboration

Lijuan Luo 1 collaboration

Miles Tuncel 1 collaboration

Karsten Hokamp 1 collaboration

Jay C D Hinton 1 collaboration

Denise M Monack 1 collaboration

Federico Rosconi 1 collaboration

Bharathi Sundaresh 1 collaboration

Emily Rudmann 1 collaboration

Luisa Maria Nieto Ramirez 1 collaboration

Andrew T Nishimoto 1 collaboration

Stephen J Wood 1 collaboration

Noemí Buján 1 collaboration

Kaicheng Li 1 collaboration

Jianmin Gao 1 collaboration

Matthew Frank 1 collaboration

Stephanie M Reeve 1 collaboration

Richard E Lee 1 collaboration

Charles O Rock 1 collaboration

Jason W Rosch 1 collaboration

Katie Uhl 1 collaboration

Shreya Paithankar 1 collaboration

Tara E Jager 1 collaboration

Mohamed Abdelgied 1 collaboration

Bhavna Dixit 1 collaboration

Raya Marashdeh 1 collaboration

Dewen Luo-Li 1 collaboration

Kaylie Tripp 1 collaboration

Angela M Peraino 1 collaboration

Maximiliano Tamae Kakazu 1 collaboration

Cameron Lawson 1 collaboration

Dave W Chesla 1 collaboration

Ningzhi Luo-Li 1 collaboration

Edward T Murphy 1 collaboration

Jeremy Prokop 1 collaboration

Reda E Girgis 1 collaboration

Xiaopeng Li 1 collaboration