Atul Rangadurai

Affiliations

Department of Biochemistry, Duke University School of Medicine, Durham, NC, 27710, USA.

Publications (13)

Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction.

Nature communications

Avec: Honglue Shi , Hala Abou Assi , Rohit Roy , David A Case , Daniel Herschlag , Joseph D Yesselman , Hashim M Al-Hashimi

Environmental Effects on Guanine-Thymine Mispair Tautomerization Explored with Quantum Mechanical/Molecular Mechanical Free Energy Simulations.

Journal of the American Chemical Society

Avec: Pengfei Li , Hashim M Al-Hashimi , Sharon Hammes-Schiffer

Publisher Correction: High-performance virtual screening by targeting a high-resolution RNA dynamic ensemble.

Nature structural & molecular biology

Avec: Laura R Ganser , Janghyun Lee , Dawn K Merriman , Megan L Kelly , Aman D Kansal , Bharathwaj Sathyamoorthy , Hashim M Al-Hashimi

Measuring thermodynamic preferences to form non-native conformations in nucleic acids using ultraviolet melting.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Honglue Shi , Yu Xu , Bei Liu , Hala Abou Assi , John D Boom , Huiqing Zhou , Isaac J Kimsey , Hashim M Al-Hashimi

Probing conformational transitions towards mutagenic Watson-Crick-like G·T mismatches using off-resonance sugar carbon R

Journal of biomolecular NMR

Avec: Eric S Szymanski , Isaac Kimsey , Honglue Shi , Hashim M Al-Hashimi

Characterizing micro-to-millisecond chemical exchange in nucleic acids using off-resonance R

Progress in nuclear magnetic resonance spectroscopy

Avec: Eric S Szymaski , Isaac J Kimsey , Honglue Shi , Hashim M Al-Hashimi

Direct evidence for (G)O6···H

Journal of magnetic resonance (San Diego, Calif. : 1997)

Avec: Johannes Kremser , Honglue Shi , Christoph Kreutz , Hashim M Al-Hashimi

Extending the Sensitivity of CEST NMR Spectroscopy to Micro-to-Millisecond Dynamics in Nucleic Acids Using High-Power Radio-Frequency Fields.

Angewandte Chemie (International ed. in English)

Avec: Honglue Shi , Hashim M Al-Hashimi

DNA mismatches reveal conformational penalties in protein-DNA recognition.

Nature

Avec: Ariel Afek , Honglue Shi , Harshit Sahay , Alon Senitzki , Suela Xhani , Mimi Fang , Raul Salinas , Zachery Mielko , Miles A Pufall , Gregory M K Poon , Tali E Haran , Maria A Schumacher , Hashim M Al-Hashimi , Raluca Gordân

A quantitative model predicts how m

Nature communications

Avec: Bei Liu , Honglue Shi , Felix Nussbaumer , Chia-Chieh Chu , Kevin Andreas Erharter , David A Case , Christoph Kreutz , Hashim M Al-Hashimi

Probing the Hydrogen-Bonding Environment of Individual Bases in DNA Duplexes with Isotope-Edited Infrared Spectroscopy.

The journal of physical chemistry. B

Avec: Robert J Fick , Amy Y Liu , Felix Nussbaumer , Christoph Kreutz , Yu Xu , Roger D Sommer , Honglue Shi , Steve Scheiner , Allison L Stelling

Lifetime of ground conformational state determines the activity of structured RNA.

Research square

Avec: Rhese D Thompson , Derek L Carbaugh , Joshua R Nielsen , Ciara M Witt , Rita M Meganck , Bo Zhao , Jeffrey P Bonin , Nathan I Nicely , William F Marzluff , Aaron T Frank , Helen M Lazear , Qi Zhang

Rapid assessment of Watson-Crick to Hoogsteen exchange in unlabeled DNA duplexes using high-power SELOPE imino

Magnetic resonance (Gottingen, Germany)

Avec: Bei Liu , Honglue Shi , Hashim M Al-Hashimi

Réseau de co-auteurs

Hashim M Al-Hashimi 11 collaborations

Honglue Shi 10 collaborations

Bei Liu 3 collaborations

Christoph Kreutz 3 collaborations

Hala Abou Assi 2 collaborations

David A Case 2 collaborations

Yu Xu 2 collaborations

Isaac J Kimsey 2 collaborations

Felix Nussbaumer 2 collaborations

Rohit Roy 1 collaboration

Daniel Herschlag 1 collaboration

Joseph D Yesselman 1 collaboration

Pengfei Li 1 collaboration

Sharon Hammes-Schiffer 1 collaboration

Laura R Ganser 1 collaboration

Janghyun Lee 1 collaboration

Dawn K Merriman 1 collaboration

Megan L Kelly 1 collaboration

Aman D Kansal 1 collaboration

Bharathwaj Sathyamoorthy 1 collaboration

John D Boom 1 collaboration

Huiqing Zhou 1 collaboration

Eric S Szymanski 1 collaboration

Isaac Kimsey 1 collaboration

Eric S Szymaski 1 collaboration

Johannes Kremser 1 collaboration

Ariel Afek 1 collaboration

Harshit Sahay 1 collaboration

Alon Senitzki 1 collaboration

Suela Xhani 1 collaboration

Mimi Fang 1 collaboration

Raul Salinas 1 collaboration

Zachery Mielko 1 collaboration

Miles A Pufall 1 collaboration

Gregory M K Poon 1 collaboration

Tali E Haran 1 collaboration

Maria A Schumacher 1 collaboration

Raluca Gordân 1 collaboration

Chia-Chieh Chu 1 collaboration

Kevin Andreas Erharter 1 collaboration

Robert J Fick 1 collaboration

Amy Y Liu 1 collaboration

Roger D Sommer 1 collaboration

Steve Scheiner 1 collaboration

Allison L Stelling 1 collaboration

Rhese D Thompson 1 collaboration

Derek L Carbaugh 1 collaboration

Joshua R Nielsen 1 collaboration

Ciara M Witt 1 collaboration

Rita M Meganck 1 collaboration

Bo Zhao 1 collaboration

Jeffrey P Bonin 1 collaboration

Nathan I Nicely 1 collaboration

William F Marzluff 1 collaboration

Aaron T Frank 1 collaboration

Helen M Lazear 1 collaboration

Qi Zhang 1 collaboration