Anastasia A Minervina

Affiliations

Department of Immunology, St. Jude Children's Research Hospital, Memphis, TN, United States.

Publications (23)

Inactivated tick-borne encephalitis vaccine elicits several overlapping waves of T cell response.

Frontiers in immunology

Avec: Anastasiia L Sycheva , Ekaterina A Komech , Mikhail V Pogorelyy , Shamil Z Urazbakhtin , Maria A Salnikova , Mikhail F Vorovitch , Eugene P Kopantzev , Ivan V Zvyagin , Alexander Y Komkov , Ilgar Z Mamedov , Yuri B Lebedev

TCR repertoire profiling revealed antigen-driven CD8+ T cell clonal groups shared in synovial fluid of patients with spondyloarthritis.

Frontiers in immunology

Avec: Ekaterina A Komech , Anastasia D Koltakova , Anna A Barinova , Maria A Salnikova , Evgeniya I Shmidt , Tatiana V Korotaeva , Elena Y Loginova , Shandor F Erdes , Ekaterina A Bogdanova , Mikhail Shugay , Sergey Lukyanov , Yury B Lebedev , Ivan V Zvyagin

TIRTL-seq: Deep, quantitative, and affordable paired TCR repertoire sequencing.

bioRxiv : the preprint server for biology

Avec: Mikhail V Pogorelyy , Allison M Kirk , Samir Adhikari , Balaji Sundararaman , Kasi Vegesana , David C Brice , Zachary B Scott , Auteur inconnu , Paul G Thomas

Primary and secondary anti-viral response captured by the dynamics and phenotype of individual T cell clones.

eLife

Avec: Mikhail V Pogorelyy , Ekaterina A Komech , Vadim K Karnaukhov , Petra Bacher , Elisa Rosati , Andre Franke , Dmitriy M Chudakov , Ilgar Z Mamedov , Yuri B Lebedev , Thierry Mora , Aleksandra M Walczak

The energy sensor AMPK orchestrates metabolic and translational adaptation in expanding T helper cells.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Avec: Katharina A Mayer , Ursula Smole , Ci Zhu , Sophia Derdak , Maria Salnikova , Nadine Witzeneder , Anna Christamentl , Nicole Boucheron , Petra Waidhofer-Söllner , Michael Trauner , Gregor Hoermann , Klaus G Schmetterer , Ilgar Z Mamedov , Martin Bilban , Wilfried Ellmeier , Winfried F Pickl , Guido A Gualdoni , Gerhard J Zlabinger

SARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans.

Cell

Avec: Philip A Mudd , Mikhail V Pogorelyy , Jackson S Turner , Wooseob Kim , Elizaveta Kalaidina , Jan Petersen , Aaron J Schmitz , Tingting Lei , Alem Haile , Allison M Kirk , Robert C Mettelman , Jeremy Chase Crawford , Thi H O Nguyen , Louise C Rowntree , Elisa Rosati , Katherine A Richards , Andrea J Sant , Michael K Klebert , Teresa Suessen , William D Middleton , Auteur inconnu , Joshua Wolf , Sharlene A Teefey , Jane A O'Halloran , Rachel M Presti , Katherine Kedzierska , Jamie Rossjohn , Paul G Thomas , Ali H Ellebedy

Newborn and child-like molecular signatures in older adults stem from TCR shifts across human lifespan.

Nature immunology

Avec: Carolien E van de Sandt , Thi H O Nguyen , Nicholas A Gherardin , Jeremy Chase Crawford , Jerome Samir , Mikhail V Pogorelyy , Simone Rizzetto , Christopher Szeto , Jasveen Kaur , Nicole Ranson , Sabrina Sonda , Alice Harper , Samuel J Redmond , Hayley A McQuilten , Tejas Menon , Sneha Sant , Xiaoxiao Jia , Kate Pedrina , Theo Karapanagiotidis , Natalie Cain , Suellen Nicholson , Zhenjun Chen , Ratana Lim , E Bridie Clemens , Auda Eltahla , Nicole L La Gruta , Jane Crowe , Martha Lappas , Jamie Rossjohn , Dale I Godfrey , Paul G Thomas , Stephanie Gras , Katie L Flanagan , Fabio Luciani , Katherine Kedzierska

Detecting T cell receptors involved in immune responses from single repertoire snapshots.

PLoS biology

Avec: Mikhail V Pogorelyy , Mikhail Shugay , Dmitriy M Chudakov , Yuri B Lebedev , Thierry Mora , Aleksandra M Walczak

SARS-CoV-2 antigen exposure history shapes phenotypes and specificity of memory CD8 T cells.

medRxiv : the preprint server for health sciences

Avec: Mikhail V Pogorelyy , Allison M Kirk , Jeremy Chase Crawford , E Kaitlynn Allen , Ching-Heng Chou , Robert C Mettelman , Kim J Allison , Chun-Yang Lin , David C Brice , Xun Zhu , Kasi Vegesana , Gang Wu , Sanchit Trivedi , Pratibha Kottapalli , Daniel Darnell , Suzanne McNeely , Scott R Olsen , Stacey Schultz-Cherry , Jeremie H Estepp , Auteur inconnu , Maureen A McGargill , Joshua Wolf , Paul G Thomas

Common Trajectories of Highly Effective CD19-Specific CAR T Cells Identified by Endogenous T-cell Receptor Lineages.

Cancer discovery

Avec: Taylor L Wilson , Hyunjin Kim , Ching-Heng Chou , Deanna Langfitt , Robert C Mettelman , E Kaitlynn Allen , Jean-Yves Métais , Mikhail V Pogorelyy , Janice M Riberdy , M Paulina Velasquez , Pratibha Kottapalli , Sanchit Trivedi , Scott R Olsen , Timothy Lockey , Catherine Willis , Michael M Meagher , Brandon M Triplett , Aimee C Talleur , Stephen Gottschalk , Jeremy Chase Crawford , Paul G Thomas

Robust SARS-CoV-2 T cell responses with common TCRαβ motifs toward COVID-19 vaccines in patients with hematological malignancy impacting B cells.

Cell reports. Medicine

Avec: Thi H O Nguyen , Louise C Rowntree , Lilith F Allen , Brendon Y Chua , Lukasz Kedzierski , Chhay Lim , Masa Lasica , G Surekha Tennakoon , Natalie R Saunders , Megan Crane , Lynette Chee , John F Seymour , Mary Ann Anderson , Ashley Whitechurch , E Bridie Clemens , Wuji Zhang , So Young Chang , Jennifer R Habel , Xiaoxiao Jia , Hayley A McQuilten , Mikhail V Pogorelyy , Priyanka Chaurasia , Jan Petersen , Tejas Menon , Luca Hensen , Jessica A Neil , Francesca L Mordant , Hyon-Xhi Tan , Aira F Cabug , Adam K Wheatley , Stephen J Kent , Kanta Subbarao , Theo Karapanagiotidis , Han Huang , Lynn K Vo , Natalie L Cain , Suellen Nicholson , Florian Krammer , Grace Gibney , Fiona James , Janine M Trevillyan , Jason A Trubiano , Jeni Mitchell , Britt Christensen , Katherine A Bond , Deborah A Williamson , Jamie Rossjohn , Jeremy Chase Crawford , Paul G Thomas , Karin A Thursky , Monica A Slavin , Constantine S Tam , Benjamin W Teh , Katherine Kedzierska

Characterization of SARS-CoV-2 public CD4+ αβ T cell clonotypes through reverse epitope discovery.

bioRxiv : the preprint server for biology

Avec: Elisa Rosati , Mikhail V Pogorelyy , Alexander Scheffold , Andre Franke , Petra Bacher , Paul G Thomas

Immune fingerprinting through repertoire similarity.

PLoS genetics

Avec: Thomas Dupic , Meriem Bensouda Koraichi , Mikhail V Pogorelyy , Thierry Mora , Aleksandra M Walczak

SARS-CoV-2-specific T cell memory with common TCRαβ motifs is established in unvaccinated children who seroconvert after infection.

Immunity

Avec: Louise C Rowntree , Thi H O Nguyen , Lukasz Kedzierski , Melanie R Neeland , Jan Petersen , Jeremy Chase Crawford , Lilith F Allen , E Bridie Clemens , Brendon Chua , Hayley A McQuilten , Mikhail V Pogorelyy , Priyanka Chaurasia , Hyon-Xhi Tan , Adam K Wheatley , Xiaoxiao Jia , Fatima Amanat , Florian Krammer , E Kaitlynn Allen , Sabrina Sonda , Katie L Flanagan , Jaycee Jumarang , Pia S Pannaraj , Paul V Licciardi , Stephen J Kent , Katherine A Bond , Deborah A Williamson , Jamie Rossjohn , Paul G Thomas , Shidan Tosif , Nigel W Crawford , Carolien E van de Sandt , Katherine Kedzierska

Resolving SARS-CoV-2 CD4

Cell reports. Medicine

Avec: Mikhail V Pogorelyy , Elisa Rosati , Robert C Mettelman , Alexander Scheffold , Andre Franke , Petra Bacher , Paul G Thomas

[A Pipeline for the Error-free Identification of Somatic Alu Insertions in High-throughput Sequencing Data].

Molekuliarnaia biologiia

Avec: G A Nugmanov , A Y Komkov , M V Saliutina , A A Minervina , Y B Lebedev , I Z Mamedov

Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection.

eLife

Avec: Ekaterina A Komech , Aleksei Titov , Meriem Bensouda Koraichi , Elisa Rosati , Ilgar Z Mamedov , Andre Franke , Grigory A Efimov , Dmitriy M Chudakov , Thierry Mora , Aleksandra M Walczak , Yuri B Lebedev , Mikhail V Pogorelyy

A novel unconventional T cell population enriched in Crohn's disease.

Gut

Avec: Elisa Rosati , Gabriela Rios Martini , Mikhail V Pogorelyy , Frauke Degenhardt , Mareike Wendorff , Soner Sari , Gabriele Mayr , Antonella Fazio , Christel Marie Dowds , Charlotte Hauser , Florian Tran , Witigo von Schönfels , Julius Pochhammer , Maria A Salnikova , Charlot Jaeckel , Johannes Boy Gigla , Sanaz Sedghpour Sabet , Matthias Hübenthal , Esther Schiminsky , Stefan Schreiber , Philip C Rosenstiel , Alexander Scheffold , Paul G Thomas , Wolfgang Lieb , Bernd Bokemeyer , Maria Witte , Konrad Aden , Alexander Hendricks , Clemens Schafmayer , Jan-Hendrick Egberts , Ilgar Z Mamedov , Petra Bacher , Andre Franke

SARS-CoV-2 antigen exposure history shapes phenotypes and specificity of memory CD8

Nature immunology

Robust and prototypical immune responses toward COVID-19 vaccine in First Nations peoples are impacted by comorbidities.

Nature immunology

Avec: Wuji Zhang , Lukasz Kedzierski , Brendon Y Chua , Mark Mayo , Claire Lonzi , Vanessa Rigas , Bianca F Middleton , Hayley A McQuilten , Louise C Rowntree , Lilith F Allen , Ruth A Purcell , Hyon-Xhi Tan , Jan Petersen , Priyanka Chaurasia , Francesca Mordant , Mikhail V Pogorelyy , Jeremy Chase Crawford , Griffith B Perkins , Eva Zhang , Stephanie Gras , E Bridie Clemens , Jennifer A Juno , Jennifer Audsley , David S Khoury , Natasha E Holmes , Irani Thevarajan , Kanta Subbarao , Florian Krammer , Allen C Cheng , Miles P Davenport , Branka Grubor-Bauk , P Toby Coates , Britt Christensen , Paul G Thomas , Adam K Wheatley , Stephen J Kent , Jamie Rossjohn , Amy W Chung , John Boffa , Adrian Miller , Sarah Lynar , Jane Nelson , Thi H O Nguyen , Jane Davies , Katherine Kedzierska

copepodTCR: Identification of Antigen-Specific T Cell Receptors with combinatorial peptide pooling.

bioRxiv : the preprint server for biology

Avec: Vasilisa A Kovaleva , David J Pattinson , Carl Barton , Sarah R Chapin , Katherine A Richards , Andrea J Sant , Paul G Thomas , Mikhail V Pogorelyy , Hannah V Meyer

DNAJB1-PRKACA fusion neoantigens elicit rare endogenous T cell responses that potentiate cell therapy for fibrolamellar carcinoma.

Cell reports. Medicine

Avec: Allison M Kirk , Jeremy Chase Crawford , Ching-Heng Chou , Cliff Guy , Kirti Pandey , Tanya Kozlik , Ravi K Shah , Shanzou Chung , Phuong Nguyen , Xiaoyu Zhang , Jin Wang , Matthew Bell , Robert C Mettelman , E Kaitlynn Allen , Mikhail V Pogorelyy , Hyunjin Kim , Walid Awad , Resha Bajracharya , Toni White , Donald Long , Brittney Gordon , Michelle Morrison , Evan S Glazer , Andrew J Murphy , Yixing Jiang , Elizabeth A Fitzpatrick , Mark Yarchoan , Praveen Sethupathy , Nathan P Croft , Anthony W Purcell , Sara M Federico , Elizabeth Stewart , Stephen Gottschalk , Anthony E Zamora , Christopher DeRenzo , Scott E Strome , Paul G Thomas

Learning predictive signatures of HLA type from T-cell repertoires.

bioRxiv : the preprint server for biology

Avec: Maria Ruiz Ortega , Mikhail V Pogorelyy , Paul G Thomas , Aleksandra M Walczak , Thierry Mora

Réseau de co-auteurs

Mikhail V Pogorelyy 20 collaborations

Paul G Thomas 15 collaborations

Jeremy Chase Crawford 9 collaborations

Elisa Rosati 6 collaborations

Robert C Mettelman 6 collaborations

Ilgar Z Mamedov 5 collaborations

Allison M Kirk 5 collaborations

Andre Franke 5 collaborations

Thierry Mora 5 collaborations

Aleksandra M Walczak 5 collaborations

Thi H O Nguyen 5 collaborations

Katherine Kedzierska 5 collaborations

Jamie Rossjohn 5 collaborations

E Kaitlynn Allen 5 collaborations

Ekaterina A Komech 4 collaborations

Yuri B Lebedev 4 collaborations

None None 4 collaborations

Petra Bacher 4 collaborations

Jan Petersen 4 collaborations

Louise C Rowntree 4 collaborations

Hayley A McQuilten 4 collaborations

E Bridie Clemens 4 collaborations

Ching-Heng Chou 4 collaborations

Maria A Salnikova 3 collaborations

Kasi Vegesana 3 collaborations

David C Brice 3 collaborations

Dmitriy M Chudakov 3 collaborations

Joshua Wolf 3 collaborations

Xiaoxiao Jia 3 collaborations

Sanchit Trivedi 3 collaborations

Pratibha Kottapalli 3 collaborations

Scott R Olsen 3 collaborations

Lilith F Allen 3 collaborations

Lukasz Kedzierski 3 collaborations

Priyanka Chaurasia 3 collaborations

Hyon-Xhi Tan 3 collaborations

Adam K Wheatley 3 collaborations

Stephen J Kent 3 collaborations

Florian Krammer 3 collaborations

Alexander Scheffold 3 collaborations

Ivan V Zvyagin 2 collaborations

Mikhail Shugay 2 collaborations

Katherine A Richards 2 collaborations

Andrea J Sant 2 collaborations

Carolien E van de Sandt 2 collaborations

Sabrina Sonda 2 collaborations

Tejas Menon 2 collaborations

Theo Karapanagiotidis 2 collaborations

Suellen Nicholson 2 collaborations

Stephanie Gras 2 collaborations

Katie L Flanagan 2 collaborations

Kim J Allison 2 collaborations

Chun-Yang Lin 2 collaborations

Xun Zhu 2 collaborations

Gang Wu 2 collaborations

Daniel Darnell 2 collaborations

Suzanne McNeely 2 collaborations

Stacey Schultz-Cherry 2 collaborations

Jeremie H Estepp 2 collaborations

Maureen A McGargill 2 collaborations

Hyunjin Kim 2 collaborations

Stephen Gottschalk 2 collaborations

Brendon Y Chua 2 collaborations

Wuji Zhang 2 collaborations

Kanta Subbarao 2 collaborations

Britt Christensen 2 collaborations

Katherine A Bond 2 collaborations

Deborah A Williamson 2 collaborations

Meriem Bensouda Koraichi 2 collaborations

Anastasiia L Sycheva 1 collaboration

Shamil Z Urazbakhtin 1 collaboration

Mikhail F Vorovitch 1 collaboration

Eugene P Kopantzev 1 collaboration

Alexander Y Komkov 1 collaboration

Anastasia D Koltakova 1 collaboration

Anna A Barinova 1 collaboration

Evgeniya I Shmidt 1 collaboration

Tatiana V Korotaeva 1 collaboration

Elena Y Loginova 1 collaboration

Shandor F Erdes 1 collaboration

Ekaterina A Bogdanova 1 collaboration

Sergey Lukyanov 1 collaboration

Yury B Lebedev 1 collaboration

Samir Adhikari 1 collaboration

Balaji Sundararaman 1 collaboration

Zachary B Scott 1 collaboration

Vadim K Karnaukhov 1 collaboration

Katharina A Mayer 1 collaboration

Ursula Smole 1 collaboration

Ci Zhu 1 collaboration

Sophia Derdak 1 collaboration

Maria Salnikova 1 collaboration

Nadine Witzeneder 1 collaboration

Anna Christamentl 1 collaboration

Nicole Boucheron 1 collaboration

Petra Waidhofer-Söllner 1 collaboration

Michael Trauner 1 collaboration

Gregor Hoermann 1 collaboration

Klaus G Schmetterer 1 collaboration

Martin Bilban 1 collaboration

Wilfried Ellmeier 1 collaboration

Winfried F Pickl 1 collaboration

Guido A Gualdoni 1 collaboration

Gerhard J Zlabinger 1 collaboration

Philip A Mudd 1 collaboration

Jackson S Turner 1 collaboration

Wooseob Kim 1 collaboration

Elizaveta Kalaidina 1 collaboration

Aaron J Schmitz 1 collaboration

Tingting Lei 1 collaboration

Alem Haile 1 collaboration

Michael K Klebert 1 collaboration

Teresa Suessen 1 collaboration

William D Middleton 1 collaboration

Sharlene A Teefey 1 collaboration

Jane A O'Halloran 1 collaboration

Rachel M Presti 1 collaboration

Ali H Ellebedy 1 collaboration

Nicholas A Gherardin 1 collaboration

Jerome Samir 1 collaboration

Simone Rizzetto 1 collaboration

Christopher Szeto 1 collaboration

Jasveen Kaur 1 collaboration

Nicole Ranson 1 collaboration

Alice Harper 1 collaboration

Samuel J Redmond 1 collaboration

Sneha Sant 1 collaboration

Kate Pedrina 1 collaboration

Natalie Cain 1 collaboration

Zhenjun Chen 1 collaboration

Ratana Lim 1 collaboration

Auda Eltahla 1 collaboration

Nicole L La Gruta 1 collaboration

Jane Crowe 1 collaboration

Martha Lappas 1 collaboration

Dale I Godfrey 1 collaboration

Fabio Luciani 1 collaboration

Taylor L Wilson 1 collaboration

Deanna Langfitt 1 collaboration

Jean-Yves Métais 1 collaboration

Janice M Riberdy 1 collaboration

M Paulina Velasquez 1 collaboration

Timothy Lockey 1 collaboration

Catherine Willis 1 collaboration

Michael M Meagher 1 collaboration

Brandon M Triplett 1 collaboration

Aimee C Talleur 1 collaboration

Chhay Lim 1 collaboration

Masa Lasica 1 collaboration

G Surekha Tennakoon 1 collaboration

Natalie R Saunders 1 collaboration

Megan Crane 1 collaboration

Lynette Chee 1 collaboration

John F Seymour 1 collaboration

Mary Ann Anderson 1 collaboration

Ashley Whitechurch 1 collaboration

So Young Chang 1 collaboration

Jennifer R Habel 1 collaboration

Luca Hensen 1 collaboration

Jessica A Neil 1 collaboration

Francesca L Mordant 1 collaboration

Aira F Cabug 1 collaboration

Han Huang 1 collaboration

Lynn K Vo 1 collaboration

Natalie L Cain 1 collaboration

Grace Gibney 1 collaboration

Fiona James 1 collaboration

Janine M Trevillyan 1 collaboration

Jason A Trubiano 1 collaboration

Jeni Mitchell 1 collaboration

Karin A Thursky 1 collaboration

Monica A Slavin 1 collaboration

Constantine S Tam 1 collaboration

Benjamin W Teh 1 collaboration

Thomas Dupic 1 collaboration

Melanie R Neeland 1 collaboration

Brendon Chua 1 collaboration

Fatima Amanat 1 collaboration

Jaycee Jumarang 1 collaboration

Pia S Pannaraj 1 collaboration

Paul V Licciardi 1 collaboration

Shidan Tosif 1 collaboration

Nigel W Crawford 1 collaboration

G A Nugmanov 1 collaboration

A Y Komkov 1 collaboration

M V Saliutina 1 collaboration

A A Minervina 1 collaboration

Y B Lebedev 1 collaboration

I Z Mamedov 1 collaboration

Aleksei Titov 1 collaboration

Grigory A Efimov 1 collaboration

Gabriela Rios Martini 1 collaboration

Frauke Degenhardt 1 collaboration

Mareike Wendorff 1 collaboration

Soner Sari 1 collaboration

Gabriele Mayr 1 collaboration

Antonella Fazio 1 collaboration

Christel Marie Dowds 1 collaboration

Charlotte Hauser 1 collaboration

Florian Tran 1 collaboration

Witigo von Schönfels 1 collaboration

Julius Pochhammer 1 collaboration

Charlot Jaeckel 1 collaboration

Johannes Boy Gigla 1 collaboration

Sanaz Sedghpour Sabet 1 collaboration

Matthias Hübenthal 1 collaboration

Esther Schiminsky 1 collaboration

Stefan Schreiber 1 collaboration

Philip C Rosenstiel 1 collaboration

Wolfgang Lieb 1 collaboration

Bernd Bokemeyer 1 collaboration

Maria Witte 1 collaboration

Konrad Aden 1 collaboration

Alexander Hendricks 1 collaboration

Clemens Schafmayer 1 collaboration

Jan-Hendrick Egberts 1 collaboration

Mark Mayo 1 collaboration

Claire Lonzi 1 collaboration

Vanessa Rigas 1 collaboration

Bianca F Middleton 1 collaboration

Ruth A Purcell 1 collaboration

Francesca Mordant 1 collaboration

Griffith B Perkins 1 collaboration

Eva Zhang 1 collaboration

Jennifer A Juno 1 collaboration

Jennifer Audsley 1 collaboration

David S Khoury 1 collaboration

Natasha E Holmes 1 collaboration

Irani Thevarajan 1 collaboration

Allen C Cheng 1 collaboration

Miles P Davenport 1 collaboration

Branka Grubor-Bauk 1 collaboration

P Toby Coates 1 collaboration

Amy W Chung 1 collaboration

John Boffa 1 collaboration

Adrian Miller 1 collaboration

Sarah Lynar 1 collaboration

Jane Nelson 1 collaboration

Jane Davies 1 collaboration

Vasilisa A Kovaleva 1 collaboration

David J Pattinson 1 collaboration

Carl Barton 1 collaboration

Sarah R Chapin 1 collaboration

Hannah V Meyer 1 collaboration

Cliff Guy 1 collaboration

Kirti Pandey 1 collaboration

Tanya Kozlik 1 collaboration

Ravi K Shah 1 collaboration

Shanzou Chung 1 collaboration

Phuong Nguyen 1 collaboration

Xiaoyu Zhang 1 collaboration

Jin Wang 1 collaboration

Matthew Bell 1 collaboration

Walid Awad 1 collaboration

Resha Bajracharya 1 collaboration

Toni White 1 collaboration

Donald Long 1 collaboration

Brittney Gordon 1 collaboration

Michelle Morrison 1 collaboration

Evan S Glazer 1 collaboration

Andrew J Murphy 1 collaboration

Yixing Jiang 1 collaboration

Elizabeth A Fitzpatrick 1 collaboration

Mark Yarchoan 1 collaboration

Praveen Sethupathy 1 collaboration

Nathan P Croft 1 collaboration

Anthony W Purcell 1 collaboration

Sara M Federico 1 collaboration

Elizabeth Stewart 1 collaboration

Anthony E Zamora 1 collaboration

Christopher DeRenzo 1 collaboration

Scott E Strome 1 collaboration

Maria Ruiz Ortega 1 collaboration