Anand V Sastry

Affiliations

Department of Bioengineering, University of California San Diego, La Jolla, CA 92093, USA.

Publications (6)

The Bitome: digitized genomic features reveal fundamental genome organization.

Nucleic acids research

Avec: Cameron R Lamoureux , Kumari Sonal Choudhary , Zachary A King , Troy E Sandberg , Ye Gao , Patrick V Phaneuf , Donghui Choe , Byung-Kwan Cho , Bernhard O Palsson

iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning.

Nucleic acids research

Avec: Kevin Rychel , Katherine Decker , Patrick V Phaneuf , Saugat Poudel , Bernhard O Palsson

A multi-scale expression and regulation knowledge base for Escherichia coli.

Nucleic acids research

Avec: Cameron R Lamoureux , Katherine T Decker , Kevin Rychel , Ye Gao , John Luke McConn , Daniel C Zielinski , Bernhard O Palsson

Restoration of fitness lost due to dysregulation of the pyruvate dehydrogenase complex is triggered by ribosomal binding site modifications.

Cell reports

Avec: Amitesh Anand , Connor A Olson , Arjun Patel , Richard Szubin , Laurence Yang , Adam M Feist , Bernhard O Palsson

The Escherichia coli transcriptome mostly consists of independently regulated modules.

Nature communications

Avec: Ye Gao , Richard Szubin , Ying Hefner , Sibei Xu , Donghyuk Kim , Kumari Sonal Choudhary , Laurence Yang , Zachary A King , Bernhard O Palsson

Cellular responses to reactive oxygen species are predicted from molecular mechanisms.

Proceedings of the National Academy of Sciences of the United States of America

Avec: Laurence Yang , Nathan Mih , Amitesh Anand , Joon Ho Park , Justin Tan , James T Yurkovich , Jonathan M Monk , Colton J Lloyd , Troy E Sandberg , Sang Woo Seo , Donghyuk Kim , Patrick Phaneuf , Ye Gao , Jared T Broddrick , Ke Chen , David Heckmann , Richard Szubin , Ying Hefner , Adam M Feist , Bernhard O Palsson

Réseau de co-auteurs

Bernhard O Palsson 6 collaborations

Ye Gao 4 collaborations

Richard Szubin 3 collaborations

Laurence Yang 3 collaborations

Cameron R Lamoureux 2 collaborations

Kumari Sonal Choudhary 2 collaborations

Zachary A King 2 collaborations

Troy E Sandberg 2 collaborations

Patrick V Phaneuf 2 collaborations

Kevin Rychel 2 collaborations

Amitesh Anand 2 collaborations

Adam M Feist 2 collaborations

Ying Hefner 2 collaborations

Donghyuk Kim 2 collaborations

Donghui Choe 1 collaboration

Byung-Kwan Cho 1 collaboration

Katherine Decker 1 collaboration

Saugat Poudel 1 collaboration

Katherine T Decker 1 collaboration

John Luke McConn 1 collaboration

Daniel C Zielinski 1 collaboration

Connor A Olson 1 collaboration

Arjun Patel 1 collaboration

Sibei Xu 1 collaboration

Nathan Mih 1 collaboration

Joon Ho Park 1 collaboration

Justin Tan 1 collaboration

James T Yurkovich 1 collaboration

Jonathan M Monk 1 collaboration

Colton J Lloyd 1 collaboration

Sang Woo Seo 1 collaboration

Patrick Phaneuf 1 collaboration

Jared T Broddrick 1 collaboration

Ke Chen 1 collaboration

David Heckmann 1 collaboration