A E Budding

Affiliations

Laboratory of Immunogenetics, Department of Medical Microbiology and Infection Control, Amsterdam UMC, location VUmc, De Boelelaan, HZ Amsterdam, The Netherlands.
IS-Diagnostics Ltd, Department of Medical Microbiology and Infection Control, Amsterdam UMC, VUmc, Science park, XG Amsterdam, The Netherlands.

Publications (34)

The vaginal microbiome as a predictor for outcome of in vitro fertilization with or without intracytoplasmic sperm injection: a prospective study.

Human reproduction (Oxford, England)

Avec: R Koedooder , M Singer , S Schoenmakers , P H M Savelkoul , S A Morré , J D de Jonge , L Poort , W J S S Cuypers , N G M Beckers , F J M Broekmans , B J Cohlen , J E den Hartog , K Fleischer , C B Lambalk , J M J S Smeenk , J S E Laven

Asymptomatic vaginal Candida colonization and adverse pregnancy outcomes including preterm birth: a systematic review and meta-analysis.

American journal of obstetrics & gynecology MFM

Avec: Heleen J Schuster , Bastienne A de Jonghe , Jacqueline Limpens , Andries E Budding , Rebecca C Painter

Factors that influence the pancreatic and duodenal microbiome in patients undergoing pancreatic surgery.

PloS one

Avec: Eline S Zwart , Suzanne Jeleniewski , Lenka N C Boyd , Laura L Meijer , Jisce R Puik , Barbara M Zonderhuis , Freek Daams , Andries E Budding , Reina E Mebius , Geert Kazemier

Bacterial Contamination Is Involved in the Etiology of Soft-Tissue Filler, Late-Onset, Inflammatory Adverse Events.

Plastic and reconstructive surgery

Avec: Thomas S Decates , Andries E Budding , Peter J Velthuis , Yara Bachour , Lisanne W Wolters , Leonie W Schelke , Tamar E C Nijsten , Frank B Niessen

Taxonomic and metabolic diversity of Actinomycetota isolated from faeces of a 28,000-year-old mammoth.

Environmental microbiology

Avec: Doris A van Bergeijk , Hannah E Augustijn , Somayah S Elsayed , Joost Willemse , Victor J Carrión , Chao Du , Mia Urem , Lena V Grigoreva , Maksim Y Cheprasov , Semyon Grigoriev , Hans Jansen , Bas Wintermans , Andries E Budding , Herman P Spaink , Marnix H Medema , Gilles P van Wezel

Effects of Antibiotics on the Intestinal Microbiota of Mice.

Antibiotics (Basel, Switzerland)

Avec: Frederik Boetius Hertz , Andries E Budding , Malieka van der Lugt-Degen , Paul H Savelkoul , Anders Løbner-Olesen , Niels Frimodt-Møller

Microbiota of Children With Complex Appendicitis: Different Composition and Diversity of The Microbiota in Children With Complex Compared With Simple Appendicitis.

The Pediatric infectious disease journal

Avec: Sarah-May M L The , Roel Bakx , Andries E Budding , Tim G J de Meij , Johanna H van der Lee , Madeleine J Bunders , Linda Poort , Hugo A Heij , L W Ernst van Heurn , Ramon R Gorter

Simultaneous detection and ribotyping of Clostridioides difficile, and toxin gene detection directly on fecal samples.

Antimicrobial resistance and infection control

Avec: Tessel M van Rossen , Joffrey van Prehn , Alex Koek , Marcel Jonges , Robin van Houdt , Rosa van Mansfeld , Ed J Kuijper , Christina M J E Vandenbroucke-Grauls , Andries E Budding

[Faecal transplants for children with recurrent infections].

Nederlands tijdschrift voor geneeskunde

Avec: Rogier E Ooijevaar , Tessel M van Rossen , Christina M J E Vandenbroucke-Grauls , Andries E Budding , C M F Kneepkens , Tim G J de Meij

Microbiome on the Bone-Anchored Hearing System: A Prospective Study.

Frontiers in microbiology

Avec: Tim G A Calon , Margarita Trobos , Martin L Johansson , Joost van Tongeren , Malieka van der Lugt-Degen , A M L Janssen , Paul H M Savelkoul , Robert J Stokroos , Andries E Budding

Randomized clinical trial of selective decontamination of the digestive tract in elective colorectal cancer surgery (SELECT trial).

The British journal of surgery

Avec: G S A Abis , H B A C Stockmann , H J Bonjer , N van Veenendaal , M L M van Doorn-Schepens , J A Wilschut , M van Egmond , S J Oosterling , Auteur inconnu

The effect of surgical fecal stream diversion of the healthy colon on the colonic microbiota.

European journal of gastroenterology & hepatology

Avec: Wouter B van der Sluis , Mark-Bram Bouman , Margriet G Mullender , Malieka C Degen , Paul H M Savelkoul , Wilhelmus J H J Meijerink , Nanne K H de Boer , Adriaan A van Bodegraven , Andries E Budding

The influence of age, gender and race/ethnicity on the composition of the human axillary microbiome.

International journal of cosmetic science

Avec: M Li , M van der Lugt-Degen , L Du-Thumm , M Vandeven , A Fan

Prediction of Bloodstream Infection in Pediatric Acute Leukemia by Microbiota and Volatile Organic Compounds Analysis.

Journal of pediatric hematology/oncology

Avec: Mirjam E van de Velde , Sofia El Manouni El Hassani , Gert Jan L Kaspers , Jorrit Broertjes , Marc A Benninga , Nanne K H de Boer , Andries E Budding , Tim G J de Meij

Microbiota composition and mucosal immunity in patients with asymptomatic diverticulosis and controls.

PloS one

Avec: Tessel M van Rossen , Rogier E Ooijevaar , Johan Ph Kuyvenhoven , Anat Eck , Herman Bril , René Buijsman , Marja A Boermeester , Hein B A C Stockmann , Niels de Korte , Andries E Budding

Profound Pathogen-Specific Alterations in Intestinal Microbiota Composition Precede Late-Onset Sepsis in Preterm Infants: A Longitudinal, Multicenter, Case-Control Study.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Sofia El Manouni El Hassani , Hendrik J Niemarkt , Daniel J C Berkhout , Carel F W Peeters , Christian V Hulzebos , Anton H van Kaam , Boris W Kramer , Richard A van Lingen , Floor Jenken , Willem P de Boode , Marc A Benninga , Andries E Budding , Mirjam M van Weissenbruch , Nanne K H de Boer , Tim G J de Meij

PCR Characterization of Microbiota on Contracted and Non-Contracted Breast Capsules.

Aesthetic plastic surgery

Avec: Yara Bachour , Linda Poort , Stephan P Verweij , Gijs van Selms , Hay A H Winters , Marco J P F Ritt , Frank B Niessen , Andries E Budding

The Skin Microbiota in Patients Hospitalized for Cellulitis and Association With Outcome.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Duncan R Cranendonk , Floor Hugenholtz , Jan M Prins , Paul H M Savelkoul , Andries E Budding , W Joost Wiersinga , Auteur inconnu

Esophageal microbiota composition and outcome of esophageal cancer treatment: a systematic review.

Diseases of the esophagus : official journal of the International Society for Diseases of the Esophagus

Avec: Victor D Plat , Tessel M van Rossen , Freek Daams , Nanne K de Boer , Tim G J de Meij , Andries E Budding , Christina M J E Vandenbroucke-Grauls , Donald L van der Peet

Rapid Diagnostics of Joint Infections Using IS-Pro.

Journal of clinical microbiology

Avec: Martine P Bos , Robin van Houdt , Linda Poort , Anne-Xander van der Stel , Edgar J Peters , Rachid Saouti , Paul Savelkoul , Andries E Budding

Fecal microbiota composition is a better predictor of recurrent Clostridioides difficile infection than clinical factors in a prospective, multicentre cohort study.

BMC infectious diseases

Avec: Tessel M van Rossen , Yvette H van Beurden , Johannes A Bogaards , Andries E Budding , Chris J J Mulder , Christina M J E Vandenbroucke-Grauls

A targeted LC-MRM

Molecular & cellular proteomics : MCP

Avec: Nicolas Drouin , Hyung L Elfrink , Stefan A Boers , Sam van Hugten , Els Wessels , Jutte J C de Vries , Geert H Groeneveld , Paul Miggiels , Bart Van Puyvelde , Maarten Dhaenens , Andries E Budding , Leonie Ran , Roy Masius , Zoltan Takats , Arjen Boogaerds , Markus Bulters , Wouter Muurlink , Paul Oostvogel , Amy C Harms , Mariken van der Lubben , Thomas Hankemeier

Intestinal Microbiota in Children With Symptomatic Dientamoeba fragilis Infection: A Case-control Study.

The Pediatric infectious disease journal

Avec: Michael W van Kalleveen , Andries E Budding , Marc A Benninga , Paul H M Savelkoul , Tom van Gool , Iris van Maldeghem , J W Dorigo-Zetsma , Aldert Bart , Frans B Plötz , Tim G J de Meij

The profiling of microbiota in vaginal swab samples using 16S rRNA gene sequencing and IS-pro analysis.

BMC microbiology

Avec: M Singer , R Koedooder , M P Bos , L Poort , S Schoenmakers , P H M Savelkoul , J S E Laven , J D de Jonge , S A Morré ,

Effect of Daily Intake of Lactobacillus casei on Microbial Diversity and Dynamics in a Healthy Pediatric Population.

Current microbiology

Avec: Sofia El Manouni El Hassani , Nanne K H de Boer , Fenna M Jansen , Marc A Benninga , Andries E Budding , Tim G J de Meij

Role of Toll-Like Receptor 5 (TLR5) in Experimental Melioidosis.

Infection and immunity

Avec: Emma Birnie , Tassili A F Weehuizen , Jacqueline M Lankelma , Hanna K de Jong , Gavin C K W Koh , Miriam H P van Lieshout , Joris J T H Roelofs , Andries E Budding , Alex F de Vos , Tom van der Poll , W Joost Wiersinga

Alterations of Gut Microbiota and the Brain-Immune-Intestine Axis in Patients With Relapsing-Remitting Multiple Sclerosis After Treatment With Oral Cladribine: Protocol for a Prospective Observational Study.

JMIR research protocols

Avec: Jeske van Pamelen , Lynn van Olst , Andries E Budding , Auteur inconnu , Helga E de Vries , Leo H Visser

Neonatal microbiota development and the effect of early life antibiotics are determined by two distinct settler types.

PloS one

Avec: Anat Eck , Nicole B M M Rutten , Maartje M J Singendonk , Ger T Rijkers , Paul H M Savelkoul , Clemens B Meijssen , Clarissa E Crijns , Johanna H Oudshoorn , Andries E Budding , Arine M Vlieger

Composition of the vaginal microbiota during pregnancy in women living in sub-Saharan Africa: a PRISMA-compliant review.

BMC pregnancy and childbirth

Avec: Naomi C A Juliana , Remco P H Peters , Salwan Al-Nasiry , Andries E Budding , Servaas A Morré , Elena Ambrosino

The SARS-CoV-2 viral load in COVID-19 patients is lower on face mask filters than on nasopharyngeal swabs.

Scientific reports

Avec: Agnieszka Smolinska , David S Jessop , Kirk L Pappan , Alexandra De Saedeleer , Amerjit Kang , Alexandra L Martin , Max Allsworth , Charlotte Tyson , Martine P Bos , Matt Clancy , Mike Morel , Tony Cooke , Tom Dymond , Claire Harris , Jacqui Galloway , Paul Bresser , Nynke Dijkstra , Viresh Jagesar , Paul H M Savelkoul , Erik V H Beuken , Wesley H V Nix , Renaud Louis , Muriel Delvaux , Doriane Calmes , Benoit Ernst , Simona Pollini , Anna Peired , Julien Guiot , Sara Tomassetti , Andries E Budding , Frank McCaughan , Stefan J Marciniak , Marc P van der Schee

The Vaginal Microbiota Composition and Genital Infections during and after Pregnancy among Women in Pemba Island, Tanzania.

Microorganisms

Avec: Naomi C A Juliana , Saikat Deb , Mohamed H Juma , Linda Poort , Andries E Budding , Abdalla Mbarouk , Said M Ali , Sander Ouburg , Servaas A Morré , Sunil Sazawal , Elena Ambrosino

The potential of rectal swabs to differentiate simple and complex appendicitis in children with a microbiota-based test.

European journal of pediatrics

Avec: Sarah-May M L The , Tim G J de Meij , Andries E Budding , Roel Bakx , Johanna H van der Lee , Linda Poort , Huib A Cense , Hugo A Heij , L W Ernst van Heurn , Ramon R Gorter

The effect of selective decontamination on the intestinal microbiota as measured with IS-pro: a taxonomic classification tool applicable for direct evaluation of intestinal microbiota in clinical routine.

European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology

Avec: M L M van Doorn-Schepens , G S A Abis , S J Oosterling , M van Egmond , L Poort , H B A C Stockmann , H J Bonjer , P H M Savelkoul ,

Enhanced Th17 responses in the appendix of children with complex compared to simple appendicitis are associated with microbial dysbiosis.

Frontiers in immunology

Avec: Sarah-May M L The , Renée R C E Schreurs , Agata Drewniak , Roel Bakx , Tim G J de Meij , Andries E Budding , Linda Poort , Huib A Cense , Hugo A Heij , L W Ernest van Heurn , Ramon R Gorter , Madeleine J Bunders

Réseau de co-auteurs

Andries E Budding 29 collaborations

Tim G J de Meij 9 collaborations

Linda Poort 6 collaborations

Paul H M Savelkoul 6 collaborations

Tessel M van Rossen 5 collaborations

Christina M J E Vandenbroucke-Grauls 4 collaborations

Nanne K H de Boer 4 collaborations

Marc A Benninga 4 collaborations

P H M Savelkoul 3 collaborations

L Poort 3 collaborations

Sarah-May M L The 3 collaborations

Roel Bakx 3 collaborations

Hugo A Heij 3 collaborations

Ramon R Gorter 3 collaborations

None None 3 collaborations

Sofia El Manouni El Hassani 3 collaborations

R Koedooder 2 collaborations

M Singer 2 collaborations

S Schoenmakers 2 collaborations

S A Morré 2 collaborations

J D de Jonge 2 collaborations

J S E Laven 2 collaborations

Freek Daams 2 collaborations

Yara Bachour 2 collaborations

Frank B Niessen 2 collaborations

Malieka van der Lugt-Degen 2 collaborations

Johanna H van der Lee 2 collaborations

Madeleine J Bunders 2 collaborations

L W Ernst van Heurn 2 collaborations

Robin van Houdt 2 collaborations

Rogier E Ooijevaar 2 collaborations

G S A Abis 2 collaborations

H B A C Stockmann 2 collaborations

H J Bonjer 2 collaborations

M L M van Doorn-Schepens 2 collaborations

M van Egmond 2 collaborations

S J Oosterling 2 collaborations

Anat Eck 2 collaborations

W Joost Wiersinga 2 collaborations

Martine P Bos 2 collaborations

Naomi C A Juliana 2 collaborations

Servaas A Morré 2 collaborations

Elena Ambrosino 2 collaborations

Huib A Cense 2 collaborations

W J S S Cuypers 1 collaboration

N G M Beckers 1 collaboration

F J M Broekmans 1 collaboration

B J Cohlen 1 collaboration

J E den Hartog 1 collaboration

K Fleischer 1 collaboration

C B Lambalk 1 collaboration

J M J S Smeenk 1 collaboration

Heleen J Schuster 1 collaboration

Bastienne A de Jonghe 1 collaboration

Jacqueline Limpens 1 collaboration

Rebecca C Painter 1 collaboration

Eline S Zwart 1 collaboration

Suzanne Jeleniewski 1 collaboration

Lenka N C Boyd 1 collaboration

Laura L Meijer 1 collaboration

Jisce R Puik 1 collaboration

Barbara M Zonderhuis 1 collaboration

Reina E Mebius 1 collaboration

Geert Kazemier 1 collaboration

Thomas S Decates 1 collaboration

Peter J Velthuis 1 collaboration

Lisanne W Wolters 1 collaboration

Leonie W Schelke 1 collaboration

Tamar E C Nijsten 1 collaboration

Doris A van Bergeijk 1 collaboration

Hannah E Augustijn 1 collaboration

Somayah S Elsayed 1 collaboration

Joost Willemse 1 collaboration

Victor J Carrión 1 collaboration

Chao Du 1 collaboration

Mia Urem 1 collaboration

Lena V Grigoreva 1 collaboration

Maksim Y Cheprasov 1 collaboration

Semyon Grigoriev 1 collaboration

Hans Jansen 1 collaboration

Bas Wintermans 1 collaboration

Herman P Spaink 1 collaboration

Marnix H Medema 1 collaboration

Gilles P van Wezel 1 collaboration

Frederik Boetius Hertz 1 collaboration

Paul H Savelkoul 1 collaboration

Anders Løbner-Olesen 1 collaboration

Niels Frimodt-Møller 1 collaboration

Joffrey van Prehn 1 collaboration

Alex Koek 1 collaboration

Marcel Jonges 1 collaboration

Rosa van Mansfeld 1 collaboration

Ed J Kuijper 1 collaboration

C M F Kneepkens 1 collaboration

Tim G A Calon 1 collaboration

Margarita Trobos 1 collaboration

Martin L Johansson 1 collaboration

Joost van Tongeren 1 collaboration

A M L Janssen 1 collaboration

Robert J Stokroos 1 collaboration

N van Veenendaal 1 collaboration

J A Wilschut 1 collaboration

Wouter B van der Sluis 1 collaboration

Mark-Bram Bouman 1 collaboration

Margriet G Mullender 1 collaboration

Malieka C Degen 1 collaboration

Wilhelmus J H J Meijerink 1 collaboration

Adriaan A van Bodegraven 1 collaboration

M Li 1 collaboration

M van der Lugt-Degen 1 collaboration

L Du-Thumm 1 collaboration

M Vandeven 1 collaboration

A Fan 1 collaboration

Mirjam E van de Velde 1 collaboration

Gert Jan L Kaspers 1 collaboration

Jorrit Broertjes 1 collaboration

Johan Ph Kuyvenhoven 1 collaboration

Herman Bril 1 collaboration

René Buijsman 1 collaboration

Marja A Boermeester 1 collaboration

Hein B A C Stockmann 1 collaboration

Niels de Korte 1 collaboration

Hendrik J Niemarkt 1 collaboration

Daniel J C Berkhout 1 collaboration

Carel F W Peeters 1 collaboration

Christian V Hulzebos 1 collaboration

Anton H van Kaam 1 collaboration

Boris W Kramer 1 collaboration

Richard A van Lingen 1 collaboration

Floor Jenken 1 collaboration

Willem P de Boode 1 collaboration

Mirjam M van Weissenbruch 1 collaboration

Stephan P Verweij 1 collaboration

Gijs van Selms 1 collaboration

Hay A H Winters 1 collaboration

Marco J P F Ritt 1 collaboration

Duncan R Cranendonk 1 collaboration

Floor Hugenholtz 1 collaboration

Jan M Prins 1 collaboration

Victor D Plat 1 collaboration

Nanne K de Boer 1 collaboration

Donald L van der Peet 1 collaboration

Anne-Xander van der Stel 1 collaboration

Edgar J Peters 1 collaboration

Rachid Saouti 1 collaboration

Paul Savelkoul 1 collaboration

Yvette H van Beurden 1 collaboration

Johannes A Bogaards 1 collaboration

Chris J J Mulder 1 collaboration

Nicolas Drouin 1 collaboration

Hyung L Elfrink 1 collaboration

Stefan A Boers 1 collaboration

Sam van Hugten 1 collaboration

Els Wessels 1 collaboration

Jutte J C de Vries 1 collaboration

Geert H Groeneveld 1 collaboration

Paul Miggiels 1 collaboration

Bart Van Puyvelde 1 collaboration

Maarten Dhaenens 1 collaboration

Leonie Ran 1 collaboration

Roy Masius 1 collaboration

Zoltan Takats 1 collaboration

Arjen Boogaerds 1 collaboration

Markus Bulters 1 collaboration

Wouter Muurlink 1 collaboration

Paul Oostvogel 1 collaboration

Amy C Harms 1 collaboration

Mariken van der Lubben 1 collaboration

Thomas Hankemeier 1 collaboration

Michael W van Kalleveen 1 collaboration

Tom van Gool 1 collaboration

Iris van Maldeghem 1 collaboration

J W Dorigo-Zetsma 1 collaboration

Aldert Bart 1 collaboration

Frans B Plötz 1 collaboration

M P Bos 1 collaboration

Fenna M Jansen 1 collaboration

Emma Birnie 1 collaboration

Tassili A F Weehuizen 1 collaboration

Jacqueline M Lankelma 1 collaboration

Hanna K de Jong 1 collaboration

Gavin C K W Koh 1 collaboration

Miriam H P van Lieshout 1 collaboration

Joris J T H Roelofs 1 collaboration

Alex F de Vos 1 collaboration

Tom van der Poll 1 collaboration

Jeske van Pamelen 1 collaboration

Lynn van Olst 1 collaboration

Helga E de Vries 1 collaboration

Leo H Visser 1 collaboration

Nicole B M M Rutten 1 collaboration

Maartje M J Singendonk 1 collaboration

Ger T Rijkers 1 collaboration

Clemens B Meijssen 1 collaboration

Clarissa E Crijns 1 collaboration

Johanna H Oudshoorn 1 collaboration

Arine M Vlieger 1 collaboration

Remco P H Peters 1 collaboration

Salwan Al-Nasiry 1 collaboration

Agnieszka Smolinska 1 collaboration

David S Jessop 1 collaboration

Kirk L Pappan 1 collaboration

Alexandra De Saedeleer 1 collaboration

Amerjit Kang 1 collaboration

Alexandra L Martin 1 collaboration

Max Allsworth 1 collaboration

Charlotte Tyson 1 collaboration

Matt Clancy 1 collaboration

Mike Morel 1 collaboration

Tony Cooke 1 collaboration

Tom Dymond 1 collaboration

Claire Harris 1 collaboration

Jacqui Galloway 1 collaboration

Paul Bresser 1 collaboration

Nynke Dijkstra 1 collaboration

Viresh Jagesar 1 collaboration

Erik V H Beuken 1 collaboration

Wesley H V Nix 1 collaboration

Renaud Louis 1 collaboration

Muriel Delvaux 1 collaboration

Doriane Calmes 1 collaboration

Benoit Ernst 1 collaboration

Simona Pollini 1 collaboration

Anna Peired 1 collaboration

Julien Guiot 1 collaboration

Sara Tomassetti 1 collaboration

Frank McCaughan 1 collaboration

Stefan J Marciniak 1 collaboration

Marc P van der Schee 1 collaboration

Saikat Deb 1 collaboration

Mohamed H Juma 1 collaboration

Abdalla Mbarouk 1 collaboration

Said M Ali 1 collaboration

Sander Ouburg 1 collaboration

Sunil Sazawal 1 collaboration

Renée R C E Schreurs 1 collaboration

Agata Drewniak 1 collaboration

L W Ernest van Heurn 1 collaboration