Human immunodeficiency virus-1 genome from patient with fever, Nepal.

HIV WGS fever of unknown origin

Journal

Microbiology resource announcements
ISSN: 2576-098X
Titre abrégé: Microbiol Resour Announc
Pays: United States
ID NLM: 101728794

Informations de publication

Date de publication:
21 Oct 2024
Historique:
medline: 21 10 2024
pubmed: 21 10 2024
entrez: 21 10 2024
Statut: aheadofprint

Résumé

A patient with fever presented to the referral infectious disease hospital in Kathmandu, Nepal. Metagenomic sequencing of the patient's serum recovered a near-complete genome of human immunodeficiency virus-1 (HIV-1), distinct from previous HIV-1 genomes from Nepal in GenBank. It shared 92.48% nucleotide identity with an HIV-1 subtype C isolate from India.

Identifiants

pubmed: 39431871
doi: 10.1128/mra.00768-24
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e0076824

Auteurs

Eans Tara Tuladhar (ET)

Tribhuvan University Central Department of Biotechnology, Kathmandu, Nepal.
Tribhuvan University Maharajgunj Medical Campus, Kathmandu, Nepal.

Bimal Sharma Chalise (BS)

Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal.

Binod Khadka (B)

Tribhuvan University Central Department of Biotechnology, Kathmandu, Nepal.

Mamta Tamang (M)

Tribhuvan University Central Department of Biotechnology, Kathmandu, Nepal.

Jenish Neupane (J)

Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal.

Shankar Poudel (S)

Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal.

Lindsay Droit (L)

Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.

Kathie A Mihindukulasuriya (KA)

Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.

Annie Elong Ngono (A)

La Jolla Institute for Immunology, La Jolla, California, USA.

Yuba Nidhi Basaula (YN)

Sukraraj Tropical and Infectious Disease Hospital, Kathmandu, Nepal.

Sujan Shresta (S)

La Jolla Institute for Immunology, La Jolla, California, USA.

David Wang (D)

Washington University School of Medicine in St. Louis, St. Louis, Missouri, USA.

Krishna Das Manandhar (KD)

Tribhuvan University Central Department of Biotechnology, Kathmandu, Nepal.

Classifications MeSH