Reconstructing interpretable features in computational super-resolution microscopy via regularized latent search.

diagnostic generative prior microscopy super-resolution

Journal

Biological imaging
ISSN: 2633-903X
Titre abrégé: Biol Imaging
Pays: England
ID NLM: 9918284179906676

Informations de publication

Date de publication:
2024
Historique:
received: 21 07 2023
revised: 29 04 2024
accepted: 06 05 2024
medline: 24 9 2024
pubmed: 24 9 2024
entrez: 24 9 2024
Statut: epublish

Résumé

Supervised deep learning approaches can artificially increase the resolution of microscopy images by learning a mapping between two image resolutions or modalities. However, such methods often require a large set of hard-to-get low-res/high-res image pairs and produce synthetic images with a moderate increase in resolution. Conversely, recent methods based on generative adversarial network (GAN) latent search offered a drastic increase in resolution without the need of paired images. However, they offer limited reconstruction of the high-resolution (HR) image interpretable features. Here, we propose a robust super-resolution (SR) method based on regularized latent search (RLS) that offers an actionable balance between fidelity to the ground truth (GT) and realism of the recovered image given a distribution prior. The latter allows to split the analysis of a low-resolution (LR) image into a computational SR task performed by deep learning followed by a quantification task performed by a handcrafted algorithm based on interpretable biological features. This two-step process holds potential for various applications such as diagnostics on mobile devices, where the main aim is not to recover the HR details of a specific sample but rather to obtain HR images that preserve explainable and quantifiable differences between conditions.

Identifiants

pubmed: 39314829
doi: 10.1017/S2633903X24000084
pii: S2633903X24000084
pmc: PMC11418082
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e8

Informations de copyright

© The Author(s) 2024.

Déclaration de conflit d'intérêts

The authors declare none.

Auteurs

Marzieh Gheisari (M)

Institut de Biologie de l'Ecole Normale Supérieure (ENS), PSL Research University, Paris, France.

Auguste Genovesio (A)

Institut de Biologie de l'Ecole Normale Supérieure (ENS), PSL Research University, Paris, France.

Classifications MeSH