Patient-specific cerebral 3D vessel model reconstruction using deep learning.

Aneurysm Deep learning Magnetic resonance angiography Medical image processing Segmentation

Journal

Medical & biological engineering & computing
ISSN: 1741-0444
Titre abrégé: Med Biol Eng Comput
Pays: United States
ID NLM: 7704869

Informations de publication

Date de publication:
28 May 2024
Historique:
received: 19 01 2024
accepted: 18 05 2024
medline: 28 5 2024
pubmed: 28 5 2024
entrez: 27 5 2024
Statut: aheadofprint

Résumé

Three-dimensional vessel model reconstruction from patient-specific magnetic resonance angiography (MRA) images often requires some manual maneuvers. This study aimed to establish the deep learning (DL)-based method for vessel model reconstruction. Time of flight MRA of 40 patients with internal carotid artery aneurysms was prepared, and three-dimensional vessel models were constructed using the threshold and region-growing method. Using those datasets, supervised deep learning using 2D U-net was performed to reconstruct 3D vessel models. The accuracy of the DL-based vessel segmentations was assessed using 20 MRA images outside the training dataset. The dice coefficient was used as the indicator of the model accuracy, and the blood flow simulation was performed using the DL-based vessel model. The created DL model could successfully reconstruct a three-dimensional model in all 60 cases. The dice coefficient in the test dataset was 0.859. Of note, the DL-generated model proved its efficacy even for large aneurysms (> 10 mm in their diameter). The reconstructed model was feasible in performing blood flow simulation to assist clinical decision-making. Our DL-based method could successfully reconstruct a three-dimensional vessel model with moderate accuracy. Future studies are warranted to exhibit that DL-based technology can promote medical image processing.

Identifiants

pubmed: 38802608
doi: 10.1007/s11517-024-03136-6
pii: 10.1007/s11517-024-03136-6
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : AIP Network Laboratory
ID : Grant number JPMJCR17A1

Informations de copyright

© 2024. The Author(s).

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Auteurs

Satoshi Koizumi (S)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan. sakoizumi-tky@umin.net.

Taichi Kin (T)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.
Department of Medical Information Engineering, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.

Naoyuki Shono (N)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.

Satoshi Kiyofuji (S)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.

Motoyuki Umekawa (M)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.

Katsuya Sato (K)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.

Nobuhito Saito (N)

Department of Neurosurgery, The University of Tokyo Hospital, 7-3-1Bunkyo-Ku, HongoTokyo, 113-8655, Japan.

Classifications MeSH